GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000733-TA|BGIBMGA000733-PA|IPR001173|Glycosyl
transferase, family 2, IPR000772|Ricin B lectin, IPR008997|Ricin
B-related lectin
         (589 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    29   0.46 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   1.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   5.6  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   7.4  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 28.7 bits (61), Expect = 0.46
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 64  KRQSEYRRKVMLKEKFAKQQAIKMSK-KTENDLEEQ 98
           + Q E RR++    + A QQAIK+SK + + DL EQ
Sbjct: 314 EEQREERRQIKSDARAALQQAIKLSKDQHKQDLPEQ 349


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 24  DRIKNN----DKSIAALEGKDL-LSDQPRDVEETLSKTMWKYQDYKRQSEYRRKVMLKEK 78
           D+I+N     + SI  L+ +   L +Q RD++E LSK        KRQ +  +++  +  
Sbjct: 629 DKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLV 688

Query: 79  FAKQQAIKMSKKTENDLEE 97
              ++ +K  +     +E+
Sbjct: 689 NVDEEKVKFERSCRTIIEQ 707


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 5.6
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 400  VWGGENLEISFRIWMCGGSLELIPCSRVGHVFRKRRPYGVGEKQDYMLQNSMRMARVWMD 459
            ++G  N ++ F   +CG  L L   S+V  +  +  PY  G + DY   + +  A+ +  
Sbjct: 2243 LYGDMNDDLPF---VCGKRLALNHLSKV--LSTRSFPYQYGHRYDYDDHDQLIKAKYFHG 2297

Query: 460  DYVKKVIEVNPSAAHVEIGDISERKALR--ERLQCKTF 495
                K+  +     H EI  I E K+ +  + L+ K+F
Sbjct: 2298 LEELKLAPLTHHTFHKEIKGIDEAKSKKIWDALREKSF 2335


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 7.4
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 61  QDYKRQSEYRRKVMLKEKFAKQQAIKMSKKTENDLEEQFGL 101
           +D +R   Y+R+  LKE   + Q ++  +K E   EEQ  L
Sbjct: 240 EDRQRFDNYKRE--LKETMIRNQQLQRQRKQELIAEEQQSL 278


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,164
Number of Sequences: 2123
Number of extensions: 26188
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 62
Number of HSP's gapped (non-prelim): 4
length of query: 589
length of database: 516,269
effective HSP length: 68
effective length of query: 521
effective length of database: 371,905
effective search space: 193762505
effective search space used: 193762505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)