Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000733-TA|BGIBMGA000733-PA|IPR001173|Glycosyl
transferase, family 2, IPR000772|Ricin B lectin, IPR008997|Ricin
B-related lectin
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase, p... 35 0.13
At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase / ... 35 0.17
At5g60030.1 68418.m07527 expressed protein 33 0.70
At5g16180.1 68418.m01891 hypothetical protein contains Pfam doma... 31 1.6
At5g17910.1 68418.m02100 expressed protein 31 2.1
At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase, p... 31 2.8
At4g27595.1 68417.m03964 protein transport protein-related low s... 31 2.8
At1g22880.1 68414.m02856 glycosyl hydrolase family 9 protein sim... 31 2.8
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 30 3.7
At1g20575.1 68414.m02567 dolichyl-phosphate beta-D-mannosyltrans... 30 3.7
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 30 4.9
At5g56680.1 68418.m07075 asparaginyl-tRNA synthetase 1, cytoplas... 29 8.6
At5g50830.1 68418.m06297 expressed protein 29 8.6
At5g49210.2 68418.m06091 expressed protein 29 8.6
At5g49210.1 68418.m06090 expressed protein 29 8.6
At3g17609.2 68416.m02248 bZIP transcription factor family protei... 29 8.6
At3g17609.1 68416.m02247 bZIP transcription factor family protei... 29 8.6
At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal hydrolase-r... 29 8.6
At1g32760.1 68414.m04039 glutaredoxin family protein contains Pf... 29 8.6
>At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 289
Score = 35.1 bits (77), Expect = 0.13
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 166 ETLMRSVHSIMDRTDQKHIKEIILVDDYSDLYNLHHDVQEAVDKLNNVIKKEEEMIET 223
E+L+R+VH + + T K +IL DYS +++ + V K + +EE++ ET
Sbjct: 158 ESLLRTVHELEEATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDET 215
>At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase /
DEDOL-PP synthase (DPS) identical to dehydrodolichyl
diphosphate synthase [Arabidopsis thaliana] GI:7960765
Length = 303
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 166 ETLMRSVHSIMDRTDQKHIKEIILVDDYSDLYNLHHDVQEAVDKLNNVIKKEEEMIE 222
E+L++ +H I + T K +I+ DYS +++ H + V K + +EE++ E
Sbjct: 172 ESLLKEIHEIEEATKGYKNKHLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDE 228
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 6 IVNKATKVHYRPLNWDIKDRIKNNDKSIAALEGKDLLSDQPRDVEETLSKTMWKYQDYKR 65
+V++ K+ + +IK++ KN D+ + + K+ L D+ R E K + D +
Sbjct: 198 VVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEI 257
Query: 66 QSEYRRKVMLKEKFAKQQAIKMSKKTENDLEE 97
SE R+ ++ + + + K + L+E
Sbjct: 258 VSEERKSKKKRKSDEEMGSEERKSKKKRKLKE 289
>At5g16180.1 68418.m01891 hypothetical protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 718
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 26 IKNNDKSIAALEGKDLLSDQPRDVEETLSKTMWKYQDYKRQSEYRRKVMLKEKFAKQQAI 85
I N I GKD LSD+ D+ E + + +YQ ++ +++ + L E + +
Sbjct: 432 ILRNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFE-ETKRESDIELLEVVTNGKQL 490
Query: 86 KMSKKTENDLEEQ 98
K + K+ LE Q
Sbjct: 491 KETNKSGTLLEFQ 503
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 173 HSIMDRTDQK-HIKEIILVDDYSDLYNLHHDVQEAVDKLNNVIKKEEEMIETNNID 227
HS D ++K H E D+ +D LHHDV E V ++ +M+E D
Sbjct: 591 HSASDHDEEKSHSSEDSDFDEQADSKKLHHDVAEIVLGSGETHHEQSDMMEGETSD 646
>At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 302
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 146 QYFDELPRASIIICFYNEHYETLMRSVHSIMDRTDQKHIKEIILVDDYSDLYNLHHDVQE 205
QYF +I + E+L+R+V I + T K +IL DYS ++ +
Sbjct: 151 QYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAIDYSGRLDILRACKS 210
Query: 206 AVDKLNNVIKKEEEMIE 222
V K + +EE++ E
Sbjct: 211 IVKKSEKGLIREEDVDE 227
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 205 EAVDKLNNVIKKEEEMIETNNIDMEXXXXXXXXXXXXKKSTENSEVKNNVFNIRLLKTSK 264
E V L N +K +EE IE ++D++ +N EV V + LKTS
Sbjct: 275 EKVSILENTLKDQEESIELLHVDLQAAKMVESYANNLAAEWKN-EVDKQVEESKELKTSA 333
Query: 265 REGL 268
E L
Sbjct: 334 SESL 337
>At1g22880.1 68414.m02856 glycosyl hydrolase family 9 protein
similar to GB:AAB65156 and GB:AAA96135
Length = 484
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 440 GEKQDYMLQNSMRMARVWMDDYVKKVIEVNPSAAHVEIGD 479
G+K LQNS R+A W DY+ K P +V +GD
Sbjct: 100 GKKMGPELQNS-RVAIRWATDYLLKCARATPGKLYVGVGD 138
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 30.3 bits (65), Expect = 3.7
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 34 AALEGKDLLSDQPRDVEETLSKTMWKYQDY--KRQSEYRR-KVMLKEKFAKQQAIKMSKK 90
A GK + EETL KT WK K Q E++R + F + + M
Sbjct: 590 AVTRGKVEQEQRAIQAEETLRKTRWKNASVAGKLQDEFKRLSEQMDSMFTSNEKMAMKAM 649
Query: 91 TE-NDLEEQ----FGLIRNSED-LRIRDKGY--NLHAFNTLISQRIGD-HRDLP--DTRN 139
TE N+L Q +I+++ D LR Y LH + +S + R L D ++
Sbjct: 650 TEANELRMQKRQLEEMIKDANDELRANQAEYEAKLHELSEKLSFKTSQMERMLENLDEKS 709
Query: 140 KLCQSQQYFDELPRASI--IICFYNEHYETLMRSVHSIMDRTDQ 181
+Q+ +E A++ I E E L ++ S+M + +Q
Sbjct: 710 NEIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQ 753
>At1g20575.1 68414.m02567 dolichyl-phosphate
beta-D-mannosyltransferase, putative /
dolichol-phosphate mannosyltransferase, putative /
mannose-P-dolichol synthase, putative similar to DPM1
from Homo sapiens [SP|O60762]; member of
glycosyltransferase family 2
Length = 246
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 257 IRLLKTSKREGLIRARLYGADNSVGDVLVFLDSHIEVNVGWLPPLLKR 304
I L +K+ GL A ++G ++ GD +V +D+ + + +LP +K+
Sbjct: 73 ILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKK 120
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 29.9 bits (64), Expect = 4.9
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 37 EGKDLLSDQPRDVEETLSKTMWKYQDYKRQSEYRRKVMLKEKFAKQQAIKMSKKTENDLE 96
E ++ L D+ + +EET K + R E + + K +QQA+ M+
Sbjct: 1013 EAQESLEDKKKKLEETEKKGQQLQESLTRMEEKCSNLESENKVLRQQAVSMAPNKFLSGR 1072
Query: 97 EQFGLIRNSEDLRIR-DKGYNLHAFNTLISQRIGDHRDLPDTRNK-LCQSQQYFDELPRA 154
+ L R SE + D NL + I+ R D ++ D K L + QQ +L
Sbjct: 1073 SRSILQRGSESGHLAVDARSNLDLHSHSINHR--DPSEVEDKPQKSLNEKQQENQDLLIR 1130
Query: 155 SII 157
SI+
Sbjct: 1131 SIV 1133
>At5g56680.1 68418.m07075 asparaginyl-tRNA synthetase 1, cytoplasmic
/ asparagine-tRNA ligase 1 (SYNC1) identical to
SP|Q9SW96
Length = 572
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 437 YGVGEKQDYMLQNSMRMARVWMDDYVKKVIEVNPSAAHVEIGDISERKALRERLQCKTFK 496
Y G K YM N MD V KV E+ + E D+ +++ L + ++
Sbjct: 465 YPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYE 524
Query: 497 WYLD 500
WYLD
Sbjct: 525 WYLD 528
>At5g50830.1 68418.m06297 expressed protein
Length = 281
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 175 IMDRTDQKHIKEIILVDDYSDLYNLHHDVQEAVDKLN-NVIKKEEE 219
I + D K +KE ++V+ + N H DV E ++ N V+KK+EE
Sbjct: 103 IPSKDDVKEVKEEVVVNKQEE-DNHHQDVVEKQEEENKEVVKKQEE 147
>At5g49210.2 68418.m06091 expressed protein
Length = 195
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 25 RIKNNDKSIAALEGKDLLSDQPRDVEETLSKTMWKYQDYKRQSEYRRKVMLKEKFAKQQA 84
R++ K A L + +++ R ++ +K + ++ K E R+ ++KE+ K +
Sbjct: 92 RVEKQRKDEARLLAERAANEERRLLKAEAAKV--RAEERKIADEEFRQTLIKERAEKLEM 149
Query: 85 IKM-SKKTENDLEEQFGLIRNSEDLRIRDK 113
KM +K E ++E+ L+R L I K
Sbjct: 150 WKMMGQKREEKIKEREKLLREQSSLWIEQK 179
>At5g49210.1 68418.m06090 expressed protein
Length = 195
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 25 RIKNNDKSIAALEGKDLLSDQPRDVEETLSKTMWKYQDYKRQSEYRRKVMLKEKFAKQQA 84
R++ K A L + +++ R ++ +K + ++ K E R+ ++KE+ K +
Sbjct: 92 RVEKQRKDEARLLAERAANEERRLLKAEAAKV--RAEERKIADEEFRQTLIKERAEKLEM 149
Query: 85 IKM-SKKTENDLEEQFGLIRNSEDLRIRDK 113
KM +K E ++E+ L+R L I K
Sbjct: 150 WKMMGQKREEKIKEREKLLREQSSLWIEQK 179
>At3g17609.2 68416.m02248 bZIP transcription factor family protein /
HY5-like protein (HYH) nearly identical to HY5-like
protein [Arabidopsis thaliana] GI:18042111; similar to
TGACG-motif binding factor GI:2934884 from [Glycine
max]; contains Pfam profile: PF00170 bZIP transcription
factor
Length = 149
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 68 EYRR-KVMLKEKFAKQQAIKMSKKTENDLEEQFGLIRNSEDLRIRDKGYNLHAFNTLISQ 126
EYR K +L+ + + QQA + K +DLE + ++N+ D ++ +K L NT++ +
Sbjct: 78 EYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNND-QLEEKISTLTNENTMLRK 136
Query: 127 RIGDHRDLPD 136
+ + R D
Sbjct: 137 MLINTRPKTD 146
>At3g17609.1 68416.m02247 bZIP transcription factor family protein /
HY5-like protein (HYH) nearly identical to HY5-like
protein [Arabidopsis thaliana] GI:18042111; similar to
TGACG-motif binding factor GI:2934884 from [Glycine
max]; contains Pfam profile: PF00170 bZIP transcription
factor
Length = 135
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 68 EYRR-KVMLKEKFAKQQAIKMSKKTENDLEEQFGLIRNSEDLRIRDKGYNLHAFNTLISQ 126
EYR K +L+ + + QQA + K +DLE + ++N+ D ++ +K L NT++ +
Sbjct: 64 EYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNND-QLEEKISTLTNENTMLRK 122
Query: 127 RIGDHRDLPD 136
+ + R D
Sbjct: 123 MLINTRPKTD 132
>At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1101
Score = 29.1 bits (62), Expect = 8.6
Identities = 42/206 (20%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Query: 21 DIKDRIKNNDKSIAALEGKDLLSDQPRDVEETLSKTMWKYQDYKRQSEYRRKVMLKEKFA 80
++K I N +++ AL G+D LS P E + D ++ KV LKE
Sbjct: 770 EMKSNINNQEETTKALHGEDSLSKHPVSAHEEATTRYNSILDMVLKALCNLKV-LKEDLV 828
Query: 81 KQQAIKMSKKTENDLEEQFGLIRNSEDLRIRDKGYNLHAFNTLISQRIGDH---RDLPDT 137
+ + L + F + + I D+G+ + + L++ H D +
Sbjct: 829 HNRQPFSDNQVPCVLRDFFSAFVSEQ---IEDEGFYSNLLSGLLASLEEVHSMSNDAAEV 885
Query: 138 RNKLCQSQQYFDELPRASIII-CFYNEHYETLMRS-VHSIMDRTDQKHIKEIILVDDYSD 195
+ + Q + R S++ F E YE + S + + +Q+ +I D D
Sbjct: 886 VIAILEFWQCWKSPQRESLVTRLFTLEEYERMKCSKCRKMPNYPEQRSYGVVIAADSIRD 945
Query: 196 LYNLHHDVQEAVDKLNNVIKKEEEMI 221
L +++ + VI+ E++M+
Sbjct: 946 LKCAFGNIK--FGDIIKVIRMEDKML 969
>At1g32760.1 68414.m04039 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 314
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 328 INADTFEYSPSPLVRGGFNWGLHFKWDNLPKGTLINDEDFMKPLKSPTMA 377
++ DT +SP P+ GF+ GL K ++ P ND + +KPL P +A
Sbjct: 102 LDGDTCRFSPIPVKCNGFSGGLK-KENSDPNLKNPNDYEVLKPL-DPKLA 149
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,626
Number of Sequences: 28952
Number of extensions: 636557
Number of successful extensions: 1653
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1643
Number of HSP's gapped (non-prelim): 23
length of query: 589
length of database: 12,070,560
effective HSP length: 85
effective length of query: 504
effective length of database: 9,609,640
effective search space: 4843258560
effective search space used: 4843258560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -