GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000732-TA|BGIBMGA000732-PA|IPR006317|Ubiquinol-
cytochrome c reductase, iron-sulfur subunit, IPR004192|Ubiquinol
cytochrome reductase transmembrane region, IPR005806|Rieske [2Fe-2S]
region, IPR005805|Rieske iron-sulfur protein
         (210 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.1  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   8.9  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 52   IGFFGLLCGSYAVKSEL 68
            +GFFGL+ G +  + EL
Sbjct: 1034 VGFFGLIFGIFCYRKEL 1050


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 122 EAKTPLSVLRDPETPEQRT 140
           E  TP+ V+RDPE  +Q T
Sbjct: 77  EMFTPMFVIRDPELIKQIT 95


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.142    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,296
Number of Sequences: 2123
Number of extensions: 9732
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 2
length of query: 210
length of database: 516,269
effective HSP length: 61
effective length of query: 149
effective length of database: 386,766
effective search space: 57628134
effective search space used: 57628134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)