Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000731-TA|BGIBMGA000731-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
         (775 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   1.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   3.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   3.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 23  YIQMMNDQPNYLPQALDLIKNCQDIV 48
           YI + N+Q  Y    + LIKNC  ++
Sbjct: 237 YIILTNNQAKYCTTLIGLIKNCVIVI 262


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 147 SVLYCWMHSWQGTPLL 162
           S +Y ++HSW GT LL
Sbjct: 101 SFIYHFLHSWLGTGLL 116


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 17/79 (21%), Positives = 29/79 (36%)

Query: 7   ELVQDNCQLDLKALAQYIQMMNDQPNYLPQALDLIKNCQDIVKCLTLATGNEWNLLQSIE 66
           E ++   + D+K ++ Y +  +     +           D    L +   N +  L    
Sbjct: 467 EFIRKVLEFDVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYL 526

Query: 67  EFFLRVVNHVHCTLRHEIV 85
             F  V N VHC L  E+V
Sbjct: 527 RVFFTVFNVVHCYLASELV 545


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 147 SVLYCWMHSWQGTPLL 162
           S +Y ++HSW GT LL
Sbjct: 101 SFIYHFLHSWLGTGLL 116


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,002
Number of Sequences: 317
Number of extensions: 7095
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 5
length of query: 775
length of database: 114,650
effective HSP length: 62
effective length of query: 713
effective length of database: 94,996
effective search space: 67732148
effective search space used: 67732148
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)