Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000731-TA|BGIBMGA000731-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 91 4e-19
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 87 9e-18
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 79 3e-15
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 74 7e-14
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 68 6e-12
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 67 8e-12
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 53 2e-07
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 48 4e-06
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 45 5e-05
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 39 0.003
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 38 0.004
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 37 0.012
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 36 0.021
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 35 0.037
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 34 0.086
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 34 0.086
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 32 0.35
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 31 0.61
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 31 0.80
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 30 1.1
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 1.9
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 1.9
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 28 4.3
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 28 4.3
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 28 4.3
SPAC343.10 |met11|mthfr2|methylenetetrahydrofolate reductase Met... 28 5.7
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 7.5
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 9.9
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 9.9
SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit |Schizosacc... 27 9.9
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 27 9.9
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 9.9
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 91.5 bits (217), Expect = 4e-19
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 543 IDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLS 602
+ ++F G L + +C C + + + F DL + + SV S L + + E LS
Sbjct: 230 VHSLFEGTLTSETKCLTCENITSRDESFLDLSIDIENHT-----SVTSCLRSFSASEMLS 284
Query: 603 GDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHNQSVTL 662
NK+ C C L++AE+ + I+ PK L L LK FK+ + KL +++ + L
Sbjct: 285 SKNKFHCDVCKSLQEAEKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRL 344
Query: 663 --PTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAKDNDQ-WHIYNDDIVTNADESEFS 719
T A Y L + I+H G GHY ++ + W +++D+ VT +E+
Sbjct: 345 FTTTEDAENAERMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQ 404
Query: 720 KL---HP-NSTPYILFYRRSDMEE---SSAPTLEELPP 750
+ P +T Y+LFY +D E+ S T E + P
Sbjct: 405 RFFGDQPGQATAYVLFYTAADEEDDDVSEVDTKESIKP 442
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 323 RKVGLLNLGNTCYMNSVMQALLVTRHF 349
R GL N GNTCY++SV+ +L + F
Sbjct: 39 RFYGLTNYGNTCYVSSVLVSLYHLKPF 65
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 87.0 bits (206), Expect = 9e-18
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 538 RRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCS 597
R S++ +FGG L ++ C+ C S + DL + +A S+ L+++
Sbjct: 242 RETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSV------DAKGSSLADSLKHFVH 295
Query: 598 KESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHN 657
E L+ NKY+C +C L DA + + I +P L + K F F Q +K+ + +
Sbjct: 296 AEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFN-GFQ-SSKISKQISYP 353
Query: 658 QSVTL-PTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAK-DNDQWHIYNDDIVTNADE 715
+S L P + Y L ++HAG + SGHYY+ K N W ++DD V+N
Sbjct: 354 ESFNLGPYMSDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSN--- 410
Query: 716 SEFSKLHPNSTPYILFYRRSDMEES 740
S ++ N YIL Y+R S
Sbjct: 411 SSIDRV-LNQQAYILQYKRKSTSSS 434
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 326 GLLNLGNTCYMNSVMQALLVT 346
GL+NLGNTC+MNSV+Q + T
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQT 146
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 78.6 bits (185), Expect = 3e-15
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 12/223 (5%)
Query: 524 PKKRMRHLFDTTFLRRD-SIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPE 582
P H+ LR + SI+ F G L +R +C C +S + F L + D
Sbjct: 205 PLSHFSHIEWNLHLRSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSH 264
Query: 583 ASQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFE- 641
S+Q L + + E L G + + C C R A++ ++I P+YLI+ ++ FK
Sbjct: 265 VV--SLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISV 322
Query: 642 -PKIQVQTKLMHSMYHNQSVTLPTVRARG---QHSAYSLYAAIIHAGTTLDSGHYYTLAK 697
+ ++ T L S+ + +P G S Y+L+A I H G L++GHY +
Sbjct: 323 MGRKKIDTPLGLSLQIPSKMLVPPSFQSGIGYIPSNYNLFAFICHYG-QLENGHYISDVL 381
Query: 698 DNDQWHIYNDDIVTNADESEFSKLHPN-STPYILFYRRSDMEE 739
N++W +D IV + L + S+ YILFY+RS + E
Sbjct: 382 FNNEWCHIDDSIVRTV--GGITDLREDFSSSYILFYKRSSLLE 422
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 21/124 (16%)
Query: 325 VGLLNLGNTCYMNSVMQALLVTRHFSTHVMM---------KMNAVPYWSKMGILFAKMMH 375
+GL NLGNTCYMN V+Q L + + ++ N + K+ F ++
Sbjct: 72 IGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITSAFFSLLQ 131
Query: 376 SY-----NTKLNPDEFFNVVKP--PFFTVNNQHDSSEFLGYLFVLLQSYEHCSDVNFDYS 428
S ++P F +V+ F+++ Q D+ EFL + L D+N + S
Sbjct: 132 SVLLNHGQRSISPRNFLEIVQSLNRDFSIDGQCDAQEFLNFFLDKLH-----EDLNSNAS 186
Query: 429 RQAV 432
R +
Sbjct: 187 RSPI 190
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 74.1 bits (174), Expect = 7e-14
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 543 IDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLS 602
I +F G L V C DC ++ D D+ L + ++ ++Q LE + SKE +
Sbjct: 261 IHRIFSGSLKNVVTCLDCKKERVAVDPLMDISL------DINEPTLQGCLERFVSKEKV- 313
Query: 603 GDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHNQSVTL 662
+Y C CG ++A + ++ + P + + LK F+ + + TK+ + + + +
Sbjct: 314 ---QYSCHSCGS-KNAIKQLVFDKLPPTICMQLKRFE-QNNFAMSTKIDKQVSYPAFLRM 368
Query: 663 PTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAKDNDQWHIYNDDIVTNADESEFSKLH 722
Y LY+ + H GT LD+GHY +QW + +D + ESE
Sbjct: 369 -RYNFNQDDVDYQLYSVVCHKGT-LDTGHYIAYTYYQNQWFLLDDTTIVEVKESEVL--- 423
Query: 723 PNSTPYILFYRRSDMEESSAPTLE 746
NS Y+LFY + S T++
Sbjct: 424 -NSQAYLLFYHERQILYSDEMTVK 446
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 314 PPNSKQAPARKVGLLNLGNTCYMNSVMQALL 344
PP A R G+ NLG TC+M+ ++Q++L
Sbjct: 136 PPVCATAGLR--GIQNLGATCFMSVILQSIL 164
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 67.7 bits (158), Expect = 6e-12
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 540 DSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKE 599
++ + +F G + + + C + + S + + D+QL +++ Y E
Sbjct: 316 ENALTNLFVGKMKSYIACVNVNFESARSEDYWDIQLNVK-----GMKNLEDSFRSYIQVE 370
Query: 600 SLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPK----IQVQTKLMHSMY 655
+L GDN Y D G ++A++ V+ E+ P L L LK F+++ + I++ + +
Sbjct: 371 TLEGDNCYFA-DTYGFQEAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYEFPLE 429
Query: 656 HNQSVTLPTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAK--DNDQWHIYNDDIVTNA 713
+ L + Q+ Y LY ++H+G L +GHYY L K + W+ Y+D VT A
Sbjct: 430 FDAKAFLSPEADQSQNCEYVLYGVLVHSG-DLHNGHYYALLKTEKDGPWYKYDDTRVTRA 488
Score = 34.3 bits (75), Expect = 0.065
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 325 VGLLNLGNTCYMNSVMQALLVTRHFSTHVMMKMNAVPYWSKMGILFAKMMHSYN 378
VGL N G TCYMNS++Q+L + F V P K I +A YN
Sbjct: 213 VGLKNQGATCYMNSLLQSLYIIHAFRRIVYQIPTDSPQ-GKDSIAYALQRCFYN 265
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 67.3 bits (157), Expect = 8e-12
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 540 DSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKE 599
++ ++ +F G + + V+C D + S + F D+QL + + S + ++ E
Sbjct: 333 ENALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGM-DTLEDSFRDAIQV----E 387
Query: 600 SLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKL--MHS--MY 655
+L+GDNKY GL+DA + ++ E+ P L L LK F ++ + K+ H +
Sbjct: 388 TLTGDNKYYAEG-HGLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLE 446
Query: 656 HNQSVTLPTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAK--DNDQWHIYNDDIVTNA 713
+ L + + Y L+ ++H G L GHYY L K + W ++DD VT A
Sbjct: 447 IDLEPYLSETADKSESHVYVLHGVLVHGG-DLHGGHYYALIKPEKDSNWFKFDDDRVTRA 505
Query: 714 DESE 717
E
Sbjct: 506 TIKE 509
Score = 35.1 bits (77), Expect = 0.037
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 316 NSKQAPARKVGLLNLGNTCYMNSVMQALLVTRHF 349
NSK+ VGL N G TCYMNS++Q+L T F
Sbjct: 222 NSKKETGY-VGLKNQGATCYMNSLLQSLFFTNIF 254
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 52.8 bits (121), Expect = 2e-07
Identities = 65/213 (30%), Positives = 88/213 (41%), Gaps = 29/213 (13%)
Query: 541 SIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKES 600
S I +FGG L + + S L + F+ LQL D HSV LE+ + E
Sbjct: 308 SPISQIFGGQLRSTLRVPSARDSVLL-EPFQPLQL---DIQAEDIHSVIDALEHMTAPEI 363
Query: 601 LSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHN--- 657
L + G A + + IE+ P LIL LK F +E Q Y
Sbjct: 364 LP-----EWHSSKGNVTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLS 418
Query: 658 --QSVTLPTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAK--DNDQW------HIYND 707
Q+V P+VR H Y L A + H GT+ GHY + D W HI+
Sbjct: 419 IPQNVFSPSVRG-SIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRV 477
Query: 708 DI--VTNAD---ESEFSKL-HPNSTPYILFYRR 734
I V N++ + SKL H + Y+LFY R
Sbjct: 478 PIHDVENSELSADPSLSKLGHGDRVAYLLFYTR 510
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 313 SPPNSKQAPARKVGLLNLGNTCYMNSVMQALLVTRHFSTHVMMKMNAVPY 362
SP P + G +N GN C+MNS++QAL+ F + VPY
Sbjct: 121 SPSLDAPRPIQPRGFINTGNICFMNSILQALMYCVPFYNLLKQINRMVPY 170
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 48.4 bits (110), Expect = 4e-06
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 543 IDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYY-CSKESL 601
+D+ F G + +V+C C + S+S +QL P PE S +S SLL +E
Sbjct: 160 VDSPFIGTMEQKVQCCQCLAISISYSTATSIQLCLP--PEYSGNSNVSLLSLMEADREQH 217
Query: 602 SGDNKYQCRDCGGLRDAERSVLIETSPKY---LILVLKNFKFEPKIQVQTKLMHSMY--- 655
D Y+C C ++SPK+ + ++K P I +Q +L + Y
Sbjct: 218 ISD--YKCDSC-----------FKSSPKHSKTSCIRTVDWKNPPTI-LQIQLERTSYTCQ 263
Query: 656 ----HNQSVTLPTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAKDNDQWHIYNDDIVT 711
+N S++ P+ Y L + I H+G ++ GHY +D W ND ++T
Sbjct: 264 GLTRNNVSISFPSKLILKNKHHYILRSLITHSG-SVTYGHYLCYRLQDDIWWKANDSLIT 322
Query: 712 NADESEFSKLHPNSTPYILFY 732
+ +E L + +LFY
Sbjct: 323 KSSLNE--ALSQTRSACLLFY 341
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 326 GLLNL-GNTCYMNSVMQALLVTRHFSTHVMMKMNAVPYWSKMGILFAKMMHSYNTKLNPD 384
GL N+ GN C++N V+Q+L + ++ ++ ++ + L K+ + P
Sbjct: 50 GLYNVSGNDCFLNCVLQSLASQESLLEILKLRCSSSTLYATLYELLQKLNSGPGNPITPG 109
Query: 385 EFFN---VVKPPFFTVNNQHDSSEFLGYLFVLLQ 415
F N + + Q D+ EFL +L L+
Sbjct: 110 SFLNSLEIATNKKLVRSIQQDAQEFLQHLVETLE 143
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 673 AYSLYAAIIHAGTTLDSGHYYTLAKD--NDQWHIYNDDIVTNADESEF--SKLHPNSTPY 728
+Y L A +H G GHY+T D N+ + YND+ VT DESE N+ PY
Sbjct: 1059 SYDLLAVFVHRGQA-SFGHYWTYIHDFENNVYRKYNDEYVTVVDESEIFADTTGNNANPY 1117
Query: 729 ILFYRRSD 736
+L Y R +
Sbjct: 1118 MLTYIRKE 1125
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 325 VGLLNLGNTCYMNSVMQALLVTR 347
+GL N GN CY+NS++Q + +
Sbjct: 614 IGLENTGNLCYLNSLIQYYFIIK 636
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 15/99 (15%)
Query: 326 GLLNLGNTCYMNSVMQALL----VTRHFSTHVMMK----MNAVPYWSKMGILFA---KMM 374
GL NLGN+CYMNS +Q ++ +T++F + K N + K+ + +A KM+
Sbjct: 280 GLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPLGMMGKVALSYASLLKMI 339
Query: 375 H--SYNTKLNPDEFFNVVKP--PFFTVNNQHDSSEFLGY 409
H + ++P F ++ +F+ Q DS EF+ +
Sbjct: 340 HHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAF 378
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 538 RRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFP 578
R DSII +F G+ + +EC+ C+ S + D F L L P
Sbjct: 423 RNDSIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLP 463
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 38.3 bits (85), Expect = 0.004
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRH---FST-----HVMMKMNAVPYWSKMGILFAKMMHSY 377
GL NLGNTCYMNS +Q L TR F T + + + N + ++ +FA ++ S
Sbjct: 312 GLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLGMGGQVASIFASLIKSL 371
Query: 378 ----NTKLNPDEFFNVVKP--PFFTVNNQHDSSEFLGYL 410
++ P +F + F Q DS EFL +L
Sbjct: 372 YSPEHSSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFL 410
Score = 35.9 bits (79), Expect = 0.021
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 537 LRRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSV 588
LR DS+I +F G+ + + C C++ S++ D F DL L P K + H+V
Sbjct: 453 LRNDSLIVDLFQGMYRSTLVCPVCNTVSITFDPFMDLTLPLPVK-QVWSHTV 503
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 36.7 bits (81), Expect = 0.012
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHFSTHVMMKMN 358
GL NLGN+CY+ S MQ+L + F+ H + N
Sbjct: 301 GLKNLGNSCYLASTMQSLFSIKEFAIHELNLFN 333
Score = 35.5 bits (78), Expect = 0.028
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 674 YSLYAAIIHAGTTLDSGHYYT-LAKDND---QWHIYNDDIVTNADESEFSKLHPNSTPYI 729
Y+L A I H G++ +GHY + K+ D QW ++ND+ V E +K +T Y+
Sbjct: 713 YNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAK----TTGYV 768
Query: 730 LFYRRSD 736
+ R D
Sbjct: 769 YLFERLD 775
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 326 GLLNLGNTCYMNSVMQAL 343
GL+NLGNTCYMNS +Q L
Sbjct: 101 GLINLGNTCYMNSTVQML 118
Score = 33.9 bits (74), Expect = 0.086
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 674 YSLYAAIIHAGTTLDSGHYYTLAKDND---QWHIYNDDIVTNADESEFSKLHPN---STP 727
Y L + HAG + SGHY ++++ +W +ND V+ + L +
Sbjct: 397 YDLVGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKVSIVPAEKIETLDGGGEADSA 456
Query: 728 YILFYRRSDM 737
YIL Y+ D+
Sbjct: 457 YILLYKAKDI 466
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 35.1 bits (77), Expect = 0.037
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 325 VGLLNLGNTCYMNSVMQALLVTRHFSTHVMMKM--NAVPYWSKMGILFAKMMH--SYNTK 380
VG+ N+ N Y N V+ L + F + ++K N ++ IL K+ + ++ +
Sbjct: 178 VGMNNIKNNDYFNVVIHMLAHVKPFRNYFLLKNFDNCPQLVQRLAILIRKLWNHKAFKSH 237
Query: 381 LNPDEFF---NVVKPPFFTVNNQHDSSEFLGYLFVLLQS 416
++P E V+ +++N Q D EFL + L +
Sbjct: 238 VSPQELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHN 276
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 33.9 bits (74), Expect = 0.086
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 698 DNDQWHIYNDDIVTNADESEFSKLH-PNSTPYILFYRRSD 736
D+++W+I+ND +V E E +H P P I++Y + D
Sbjct: 803 DDNRWYIFNDFLVKEVTEEEALTVHGPWKIPIIVYYEKLD 842
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.9 bits (74), Expect = 0.086
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 171 KALEENEKFEILLDVSLENLEKLFLALGEPGTLRTSEADVVIHILASLREQQEALDKIA- 229
K L+ NE++++L D + LE + E ++S D V+H +SL+ EAL +
Sbjct: 72 KLLQSNERYDLLED-ERKLLENELSQIKEYLREKSSSYDTVLHDCSSLKSVNEALKQAQD 130
Query: 230 TNVRKV--LGNLAADSRQSSRQHLQNVVDIVNAM 261
N+++ L NL +D + + + + D+ +A+
Sbjct: 131 QNLKQTAQLQNLLSDKEKEVEKKITIIKDLKDAL 164
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 31.9 bits (69), Expect = 0.35
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Query: 652 HSMYHNQSVTLPTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAKDNDQWHIYNDDIVT 711
H Y + P++R RG S Y I T+ DS YT A D ++I +
Sbjct: 114 HQHYSTTLRSPPSMRGRGIDVNSSHYPHISRPRTSSDSQKMYTRA-PVDYYYIQENPYFN 172
Query: 712 NADESEFSKLHPNSTPYILFYRRSDMEESS 741
N D+ S ST L + D E +
Sbjct: 173 NIDQDSISDKSLPSTNQSLHHSEEDTESDN 202
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 711 TNADESEFSKLHPNSTPYILFYRRSDMEESSAPTLEELPPKLQECVMAHNKHYME 765
T+ E S+ ST F + ++E P LPP L++C++ N Y E
Sbjct: 195 TDLPMEEKSESEQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKE 249
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 30.7 bits (66), Expect = 0.80
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 184 DVSLENLEKLFLALGEPGTLRTSEADVVIHI------LAS--LREQQ-EALDKIATNVRK 234
D S E+L++LFL + G LRT + ++ + +AS L EQ + D + V K
Sbjct: 124 DFSTEDLKQLFLLIFNNGKLRTLLQNAIVLLGQQTTNVASKKLNEQDGKKSDNLRNGVNK 183
Query: 235 VLGNL--AADSRQSSRQHLQNVVDIVNAMVDYKMEPLKGEPLETFKDKYEDLIS 286
V N+ A +R +R+ D + D + K E + +D YE+ S
Sbjct: 184 VKQNMRNGASARDQAREQGSKAKDKIKN--DPDAQKAKEETKQKLQDLYEEFKS 235
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 312 ASPPNSKQAPARKVGLLNLGNTCYMNSVMQAL 343
+S +SK+ GL NLG TC+ NS +Q L
Sbjct: 195 SSGKSSKKYKVISPGLKNLGATCFFNSTLQVL 226
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 527 RMRHLFDTTFLRRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQH 586
R+R L+ T + + T + VL+T+ D H L++ F+D +L E +Q
Sbjct: 107 RLRALYKT---KECTFCKTEWDTVLITKDHEIDIHDVDLAKLPFQDEKLGIVYSDEHAQE 163
Query: 587 SVQSLLEYYCSKES 600
LL++ C +++
Sbjct: 164 ESNLLLQFNCPEDA 177
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 202 TLRTSEADVVIHILASLREQQEALDKIATNVRKVLGNL--AADSRQSSRQHLQNVVDI-V 258
TL++S ++V+ + L E LDK+ +VRK L A S +S R+ L+ + + V
Sbjct: 547 TLKSSFSEVMSYELKDDDNYNEELDKLVEDVRKKLQEKEEAESSLRSVRERLEIRISLSV 606
Query: 259 NAMVDY-KMEPLKGEPLETFKDKYEDLIS 286
++ D + + +K + L+++ + +IS
Sbjct: 607 QSINDLTENKKIKTKTLKSYSGTFASMIS 635
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 28.3 bits (60), Expect = 4.3
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 11/129 (8%)
Query: 166 VMAYIKALEENEKFEILLDVSLENLEKLFLALGEPGTLR-TSEADVVIHILASLREQQEA 224
++ + A+E EIL L K L+LGEP + S D+++ + +++
Sbjct: 445 IVQKLSAIESLAGVEILCSDKTGTLTKNRLSLGEPYCVEGVSPDDLMLTACLASSRKKKG 504
Query: 225 LDKIATNVRKVLGNLAADSRQSSRQHL----------QNVVDIVNAMVDYKMEPLKGEPL 274
LD I K L N Q S+ + + + V A ++ +KG PL
Sbjct: 505 LDAIDKAFLKALRNYPKAKDQLSKYKVLDFHPFDPVSKKITAYVEAPDGQRITCVKGAPL 564
Query: 275 ETFKDKYED 283
FK +D
Sbjct: 565 WVFKTVQDD 573
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 270 KGEPLETFKDKYEDLISCLEYHMAS 294
KG PL+ D Y DL+ E H+AS
Sbjct: 187 KGPPLDLSDDPYRDLLHPAELHLAS 211
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 166 VMAYIKALEENEKFEILLDVSLENLEKLFLALGEPGTLR-TSEADVVIHILASLREQQEA 224
++ + A+E E+L L K L+LGEP T+ S D+V+ + +++
Sbjct: 357 IVQKLSAIESLAGVEVLCSDKTGTLTKNKLSLGEPFTVSGVSGDDLVLTACLAASRKRKG 416
Query: 225 LDKIATNVRKVLGN 238
LD I K L N
Sbjct: 417 LDAIDKAFLKALKN 430
>SPAC343.10 |met11|mthfr2|methylenetetrahydrofolate reductase
Met11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 641
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 345 VTRHFSTHVMMKMNAVPYWSKMGILFAKMMHSYNTKLNPDEFFNVVKPPFFTVNNQHDSS 404
+T F H+M ++A+P+ + + K + Y KLN + ++ V P VN +
Sbjct: 441 ITSLFQKHIMSDISAIPWIDEPVEVETKTIAKYLLKLNGNSWWTVGSQP--AVNGAPSAD 498
Query: 405 EFLGY 409
G+
Sbjct: 499 PVFGW 503
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 128 WLVQQGESGPDGAGLRAALSVLYCWMHSWQGTPLLGDWVMAYIKALEENEKF 179
WL + +GL +Y W HSW W+ + ++ N+ F
Sbjct: 412 WLTEDDSQYAQASGLMDIF--VYLWRHSWSNGIDYAKWISVALPSMLSNKVF 461
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 597 SKESLSGDNKYQCRDCGGLRDA-ERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMY 655
SKE LS +Y C RD R L ++S I +L EP ++ Q+K+
Sbjct: 346 SKEWLSSLEQYHCTYL--FRDVIGRRFLDQSSELQGIEILLKRVLEPYLKDQSKISEIAV 403
Query: 656 HNQSVTLPTVRARGQHSAYSLYAAII 681
+ + +R + SA +LY+ ++
Sbjct: 404 KTAMASTADILSRSKGSATALYSQLL 429
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 253 NVVDIVNAMVDYKMEPLKGEPLETFKDKYEDLI 285
N + VN MVDYK+ + L++ D + D+I
Sbjct: 3055 NKQNYVNRMVDYKLRESVKDQLKSLLDGFSDII 3087
>SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 940
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 169 YIKALEENEKFEILLDVSLEN-----LEKLFLALGEPGTLRTSEADVVIHILASLREQQE 223
Y +A + ++F+I+LD+ L N L+ L + L G L+ E +++ + +
Sbjct: 727 YCEAYVKIQQFDIILDILLVNRTDTTLQNLSVDLATLGDLKVVERPPPMNLGPHAFKSVQ 786
Query: 224 ALDKI-ATNVRKVLGNLAADSRQSSRQHLQNVVDIVNAMVDY 264
A K+ +T + GN+ + S + + I ++DY
Sbjct: 787 ATVKVSSTESAVIFGNIVYGGKASDEDKIVVLNGIPVNIIDY 828
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 155 SWQGTPLLGDWVMAYIKALEENEKFEILLD 184
+W PL W Y+ LE+ EKF+ L+
Sbjct: 507 AWSNDPLEEKWSKFYVDLLEKLEKFDEALE 536
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 731 FYRRSDMEESSAPTLEELPPKLQECV 756
F +RSD EE P LE L P +++ +
Sbjct: 302 FIKRSDFEELIKPLLERLTPPIEKAL 327
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.133 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,290,822
Number of Sequences: 5004
Number of extensions: 137233
Number of successful extensions: 457
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 401
Number of HSP's gapped (non-prelim): 53
length of query: 775
length of database: 2,362,478
effective HSP length: 78
effective length of query: 697
effective length of database: 1,972,166
effective search space: 1374599702
effective search space used: 1374599702
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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