Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000731-TA|BGIBMGA000731-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-11
SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-08
SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06) 57 6e-08
SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07) 56 1e-07
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-07
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 3e-06
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-04
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 45 2e-04
SB_52467| Best HMM Match : UCH (HMM E-Value=2.6e-23) 45 3e-04
SB_8927| Best HMM Match : UCH (HMM E-Value=0) 41 0.003
SB_8088| Best HMM Match : UCH (HMM E-Value=1.1e-20) 40 0.006
SB_19087| Best HMM Match : Sof1 (HMM E-Value=0.63) 40 0.006
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 39 0.013
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06) 39 0.013
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 39 0.017
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 38 0.023
SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022) 36 0.093
SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.093
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06) 36 0.16
SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 35 0.22
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.22
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 35 0.28
SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.38
SB_21866| Best HMM Match : UCH (HMM E-Value=0) 34 0.38
SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.87
SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18) 33 0.87
SB_44015| Best HMM Match : TPR_2 (HMM E-Value=7.3e-07) 32 1.5
SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 31 3.5
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 31 4.6
SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18) 30 8.1
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.1
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 67.7 bits (158), Expect = 3e-11
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 587 SVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQV 646
S++ +L Y+ E L G N+Y C C GL+DAERSV+I +P +L+L LK F + +
Sbjct: 715 SLEEMLGYFFEPEMLEGSNQYHCERCQGLQDAERSVVIANAPMFLVLTLKRFSYNVRTHE 774
Query: 647 QTKLMHSMYHNQSVTLPTV 665
++K++ S+ + + L V
Sbjct: 775 RSKILQSVSYPARLQLSNV 793
Score = 46.0 bits (104), Expect = 1e-04
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 223 EALDKIATNVRKVLGNLAADSRQSSRQHLQNVVDIVNAMVDYKMEPLKGEPLETFKDKYE 282
E L +I +V ++ +L + SS+ LQ + ++++ ++ Y+ E D +
Sbjct: 306 EKLPQIVEHVPDLVKSLRKEDSVSSKACLQTLAELMHCLM-YQHSGFP-ELYSPVLDCLQ 363
Query: 283 DLISCLEYHMASRWSRFKHLPPWRPRGLP-ASPPNSKQAPARKVGLLNLGNTCYMNSVMQ 341
D+ + M +W W + + ASP + ++ + GL+NLGNTCYMNSV+Q
Sbjct: 364 DMTKPSDA-MIRKWLAQS---AWSAQAVQLASPRITSKSETGRTGLVNLGNTCYMNSVLQ 419
Query: 342 ALLVTRHFST 351
+L + T
Sbjct: 420 SLYMLEDLLT 429
Score = 37.9 bits (84), Expect = 0.031
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 79 TLRHEIVTAVLDKLYSFISDPKSHIGPQTSXXXXXXXXXXXAATMSNARWLVQQGESGPD 138
T ++ VL ++++ IS P G S ++ A L + D
Sbjct: 203 TKNQNLLFPVLTEIFNVISMP----GTNPSVALASVVGFFSPEVITTATRLAASNPAVTD 258
Query: 139 GAGLRAALSVLYCWMHSWQGTPLLGDWVMAYIKALEENEKFEILLDVSLENLEKL 193
+ AL + W+ SW G + W++++++AL + K +L++V+LE L ++
Sbjct: 259 ER-MALALGRMISWL-SWPGGKRVDQWIVSFLRALAMSGKHGVLINVTLEKLPQI 311
Score = 37.5 bits (83), Expect = 0.040
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 375 HSYNTKLNPDEFFNVVKPPFFTVNNQHDSSEFLGYLFVLLQ 415
H Y P +F + +PP+F Q D SEFL Y+ L+
Sbjct: 530 HLYRAAFAPSKFLHAARPPWFAPGTQQDCSEFLKYMLDRLE 570
Score = 33.9 bits (74), Expect = 0.50
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 541 SIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEAS 584
+II+ F G L+ C C S + F DL LAFP + +A+
Sbjct: 595 NIIEDTFSGRLIVCHSCRRCRHVSCREEAFTDLPLAFPHQRDAA 638
Score = 33.5 bits (73), Expect = 0.66
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 674 YSLYAAIIHAGTTLDSGHYYTLA 696
Y+L + I+H+GT+ +SGHYY A
Sbjct: 866 YALTSVIVHSGTSSESGHYYCYA 888
Score = 31.9 bits (69), Expect = 2.0
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 700 DQWHIYNDDIVTNADESEFS---KLHPNSTPYILFYR---RSDMEESSAPTLEELPPKLQ 753
+ W++ ND V+ A FS K P TPY+L Y+ R+ + E+ L
Sbjct: 1017 NSWYLLNDSRVSYASFESFSDITKRFPKDTPYVLIYKNISRAPVARVGEQLDGEIRQDLV 1076
Query: 754 ECVMAHNKHYME 765
+ V N Y++
Sbjct: 1077 DAVTRDNLQYLQ 1088
>SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 555 VECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLSGDNKYQCRDCGG 614
++CT S + F D+QL K ++ + YC+ E L GDNKY + G
Sbjct: 358 IKCTKVDYVSTRLEPFYDIQLNVKGKK-----NIHDSFKEYCASELLDGDNKYDAGE-HG 411
Query: 615 LRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKL--MHSMYHNQSVTLPTVRARGQHS 672
L++A++ V+ + P L L L F+++P K+ + Y + +
Sbjct: 412 LQEAKKGVMFKKFPPVLHLQLMRFQYDPVADANVKINDRYEFYDKIDLDRYLQELEDTPA 471
Query: 673 AYSLYAAIIHAGTTLDSGHY 692
Y+L+A ++H+G GHY
Sbjct: 472 VYTLHAVLVHSGDN-HGGHY 490
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 325 VGLLNLGNTCYMNSVMQALLVT 346
VGL N G TCYMNS++Q L T
Sbjct: 281 VGLKNQGATCYMNSLLQTLYFT 302
>SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06)
Length = 757
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 557 CTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLR 616
C C + S F +L L S+ ++ + +E L DN+Y C C +
Sbjct: 111 CDKCGTESKRPSRFYELDLNIQ-----GHSSLNQCIKEFLKEEKLDCDNQYFCTQCQSKQ 165
Query: 617 DAERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHNQSVTLPTVRARGQHSAYSL 676
DA R + ++ P L L L F F+ +++ + LM + ++ + + A + Y L
Sbjct: 166 DARRYIELKHLPPVLNLQLLRFVFD-RVEQLSVLM-----SVTLFIEFLYAGDLSTVYEL 219
Query: 677 YAAIIHAGTTLDSGHYYTLAKDN--DQWHIYNDD 708
A ++H G++ SGHY +DN W+ +ND+
Sbjct: 220 SAVLMHHGSSAYSGHYVAHIRDNKTKSWYKFNDE 253
>SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)
Length = 711
Score = 55.6 bits (128), Expect = 1e-07
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 517 DVDSMMPPKKRMRHLFDTTFLRRDSIIDTMFGGVLLTRVECTDC---------------- 560
D+D M + + F T + +I++ MF G L+ +C C
Sbjct: 96 DLDKQMTTEANGK--FSTKEVEEVNIVEEMFQGRLVHETKCLTCENAKQRFEDFQDVSVP 153
Query: 561 -HSSSLSRDVFRDLQLA-FPDKPEA-SQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLRD 617
H + D R L L+ P K E +H+++ + + + E L +NKY C +C +
Sbjct: 154 VHEDQQAIDAKRKLMLSPTPKKDETVKKHTLEWAISQFATVEVLKDNNKYFCENCCTYTE 213
Query: 618 AERSVLIETSPKYLILVLKNFK---------FEPKI--QVQTKLMHSMYHNQSVTLPTVR 666
A S + P+ L L LK F F KI ++T LM S+Y S
Sbjct: 214 ARLSTFFDLLPQVLTLHLKRFTSVYSGLSPGFVSKITSNLETPLMLSVYDWSSEA----- 268
Query: 667 ARGQHSAYSLYAAIIHAGTTLDSGHYYTLAK 697
R + + Y L+ ++H+G T SGHY K
Sbjct: 269 CRKKCTNYELFGIVMHSGMTSCSGHYQAYVK 299
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 54.8 bits (126), Expect = 2e-07
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 542 IIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESL 601
++ +F GV+ V DC S +++ F ++ D ++ L+ K++L
Sbjct: 1236 LVRELFCGVITNNVVSLDCSHVSKTKEEFYSVRCTVAD-----MKNLYESLDEVTVKDTL 1290
Query: 602 SGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKL-MHSMYHNQSV 660
GDN Y C CG AE+ P+ L + F ++ K+ H + Q
Sbjct: 1291 DGDNMYTCSQCGKKVRAEKRACFTVLPRILCFNTMRYTFNMVTMMKEKVNTHFSFPLQLN 1350
Query: 661 TLPTVR------------ARGQHSAYSLYAAIIHAGTTLDSGHYYTLAKD-----NDQWH 703
P + + Y+L ++H GT + GHYY+ ++ D+W
Sbjct: 1351 MAPYSEEYLMGDKVDEDAEKDPNYWYNLIGVVVHTGTA-EGGHYYSFIRNRSYPQQDKWF 1409
Query: 704 IYNDDIVTNADESEFS 719
++ND V D S+ +
Sbjct: 1410 LFNDAEVKPFDPSQIA 1425
Score = 36.7 bits (81), Expect = 0.071
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 314 PPNSKQAPARKVGLLNLGNTCYMNSVMQALLV 345
P ++++AP VG++NLG TCYM S +Q L +
Sbjct: 1111 PNDNERAPCGLVGIINLGATCYMASCIQQLFL 1142
>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 538 RRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCS 597
++D + F G+ + C +C+ + F L + H++Q LE + +
Sbjct: 108 KQDQLFKKTFCGMFADQKICKECNHRYEREEAFYSLPVT------VKNHNLQDSLEQFVN 161
Query: 598 KESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFE 641
E L GDN Y C C R + + I+T P L++ LK F ++
Sbjct: 162 GEILEGDNAYFCEKCNKRRTTVKRMCIKTLPPVLVIQLKRFGYD 205
Score = 36.3 bits (80), Expect = 0.093
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 325 VGLLNLGNTCYMNSVMQALLVTRHFSTHVM------MKMNAVPYWSKMGILFAKMMHSYN 378
VGL N G TCYMNSV+Q L + +V+ ++ ++V Y ++ LF +M S
Sbjct: 5 VGLKNAGATCYMNSVLQQLYMQPGIREYVLGLDEDYVEKDSVFY--QIQSLFGHLMDSKL 62
Query: 379 TKLNPDEFFNVVK--PPFFTVNNQHDSSEF 406
P++F+ K V Q D+ EF
Sbjct: 63 QYFAPEQFWKCFKLWGQPVNVREQQDAFEF 92
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 46.0 bits (104), Expect = 1e-04
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 536 FLRRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYY 595
+ + +I+ +FGG ++V+C CH++S + D ++ + P SV ++
Sbjct: 230 YSKETTIVHGIFGGYYRSQVQCLKCHNTSNTFDPLMEIMVDIKHSP-----SVVRAIQRM 284
Query: 596 CSKESLSGDNKYQC 609
C E L GDN YQC
Sbjct: 285 CKAELLDGDNLYQC 298
Score = 43.2 bits (97), Expect = 8e-04
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 668 RGQHSAYSLYAAIIHAGTTLDSGHYYTLAK-DNDQWHIYNDDIVTNADESEFSKLHPNST 726
+G Y LY ++H+G + +SGHYY + ND W+ ND +V +
Sbjct: 331 KGPPLKYKLYGVLVHSGYSCNSGHYYCYVRGSNDCWYNMNDSMVRQVGLNTVLA----QQ 386
Query: 727 PYILFYRR 734
Y+LFY R
Sbjct: 387 AYLLFYSR 394
Score = 36.3 bits (80), Expect = 0.093
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 223 EALDKIATNVRKVLGNLAADSRQSSRQHLQNVVDIVNAMVDYKMEPLKGEPLETFKDKYE 282
E+ K A K+ G+L + SS+Q ++ +++K E E K KY+
Sbjct: 12 ESFSKDAAISSKLAGDLDSKLVTSSKQ-------VLLQRIEFKPASKPDEQYEKLKQKYK 64
Query: 283 DLISCLEYHMAS-------RWSRFKHLPPWRPRGLPASPPNSKQAPARKVG--LLNLGNT 333
L S Y + +P + P N++ R++G L NLGNT
Sbjct: 65 PLNSGSNYGQIKSNLLTNGKVDASDSIPSPKFVLYPIDKINTQWTRVRRMGPGLSNLGNT 124
Query: 334 CYMNSVMQALLVT 346
C++NSV+Q L T
Sbjct: 125 CFLNSVVQVLTYT 137
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 45.2 bits (102), Expect = 2e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 571 RDLQLAFPDKPEASQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERSVLIETS 627
R+L L P P + SV S L +C+KE+L+G NK+ C +C R+ + + E S
Sbjct: 685 RELTLGSPYLPSPGECSVMSCLSVFCAKETLTGKNKFACEECTKARNGCGTPVCEES 741
>SB_52467| Best HMM Match : UCH (HMM E-Value=2.6e-23)
Length = 422
Score = 44.8 bits (101), Expect = 3e-04
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 561 HSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAER 620
++++LS + D +A S + ++ + ++E L ++ + C C + A +
Sbjct: 221 YNTNLSEETEEDESVARKPTQRKSVVQLNDCIQLFLTREKLGANDPWYCPQCKKHQQASK 280
Query: 621 SVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHNQSVTLPTVRARGQHSAYSLYAAI 680
+ P+ L++ LK F + + + S Y + G Y L
Sbjct: 281 KFDLWCLPEVLVIHLKRFSYTSGLDM------SDY--------VIGKDGPPPLYDLIGVS 326
Query: 681 IHAGTTLDSGHY--YTLAKDNDQWHIYNDDIVTNADESEFSKLHPNSTPYILFYRR 734
H G + GHY Y ++D W+ Y+D V+ +E + + Y+LFY+R
Sbjct: 327 NHYGG-MGGGHYTAYCRNHEDDHWYSYDDSSVSQINEEQI----VSKAAYVLFYKR 377
>SB_8927| Best HMM Match : UCH (HMM E-Value=0)
Length = 316
Score = 41.1 bits (92), Expect = 0.003
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHFSTHVMMKMNAVPYWSKMGILFAKMMHSYNTKLNPDE 385
GL+N GNTCY NSV+QAL R F V ++ P + L + +N + +
Sbjct: 24 GLVNFGNTCYCNSVLQALFFCRPFRDKV---LSYKPPSKRKETLLTCLADLFNNIASQKK 80
Query: 386 FFNVVKPPFFTVNNQHDSSEFLGYL 410
V+ P F + ++ F Y+
Sbjct: 81 KVGVIAPKKFVARLRKENELFDNYM 105
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 624 IETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHNQSVTL--PTVRARGQHSAYSLYAAII 681
++ PK L L LK FK+ ++Q TKL + + + L + A Y L + +I
Sbjct: 253 VKKLPKLLALHLKRFKYMEQLQRYTKLSYRVVFPFELRLFNTSDDAVNNDQLYDLVSVVI 312
Query: 682 HAG 684
H G
Sbjct: 313 HCG 315
>SB_8088| Best HMM Match : UCH (HMM E-Value=1.1e-20)
Length = 379
Score = 40.3 bits (90), Expect = 0.006
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 587 SVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKI-- 644
+++ +E + E+L D+ + C C R+A + + + P LI+ LK F F+ +
Sbjct: 255 TLRECVELFTEPETLGEDDAWHCPKCKKHREATKQMSLWRLPDTLIIHLKRFSFKNILFR 314
Query: 645 QVQTKLMHSMYHNQSVTLPTVRARGQ--HSAYSLYAAIIHAGTTLDSGHY 692
TKL+ +T P +G+ Y LYA H G ++ GHY
Sbjct: 315 DKITKLVEFPVRGLDMT-PFCLDKGRLGGDVYDLYAVANHVG-NVNFGHY 362
Score = 33.9 bits (74), Expect = 0.50
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 538 RRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFP 578
R DSII MF G L +++ C C + S+ D F +L + P
Sbjct: 66 RNDSIIVDMFQGQLKSKLTCPVCKTISIKYDPFMNLSVPLP 106
>SB_19087| Best HMM Match : Sof1 (HMM E-Value=0.63)
Length = 279
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 674 YSLYAAIIHAGTTLDSGHYYTLAKD--NDQWHIYNDDIVTNADESEFSK 720
Y L++ +IH+G+ GHYY K ++QW+ +ND VT + E +
Sbjct: 5 YELFSIMIHSGSA-SGGHYYAYIKSFADNQWYCFNDQNVTQVGDDEIER 52
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 39.1 bits (87), Expect = 0.013
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHFSTHVMM--------KMNAVPYWSKMGILFAKMMHSY 377
GL NLGNTCYMNSV+Q L T + + + K N + ++ F+ ++ +
Sbjct: 697 GLRNLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDDINKENPLGTSGELAEQFSILVRAT 756
Query: 378 N----TKLNPDEFFNVVK--PPFFTVNNQHDSSEFLGYLFVLLQSYEHCSD 422
N L+P EF ++ F +Q DS EFL + L + C D
Sbjct: 757 NCGRFKSLSPLEFKRLIGRIKTSFAGYDQQDSQEFLALMMDKLHE-DVCQD 806
>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
Length = 781
Score = 39.1 bits (87), Expect = 0.013
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 316 NSKQAPARKVGLLNLGNTCYMNSVMQALLVTRHFSTHVMMK 356
NS K+ NLGNTCYMN+++Q+LL F+ + K
Sbjct: 595 NSSAVSGSKIRFSNLGNTCYMNAILQSLLGIEPFAQDLANK 635
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 38.7 bits (86), Expect = 0.017
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHF 349
GL NLGNTCYMNSV+Q L+ F
Sbjct: 216 GLRNLGNTCYMNSVLQVLMTLPEF 239
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 38.3 bits (85), Expect = 0.023
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 688 DSGHY--YTLAKDNDQWHIYNDDIVTNADESEFSKLHPNSTPYILFYRRSDMEESSAPTL 745
DSGHY YT N W++++D +V+ EF N T Y+LFY + +A +
Sbjct: 1154 DSGHYKAYTRHGRNADWYLFDDHLVSK----EFPGSSTNKTVYLLFYNKRSGSSLNASAI 1209
Query: 746 EE 747
++
Sbjct: 1210 DD 1211
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHF 349
GL NLGNTC+MN+ +Q L V + F
Sbjct: 465 GLENLGNTCFMNAGLQCLFVIKPF 488
>SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)
Length = 340
Score = 36.3 bits (80), Expect = 0.093
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 326 GLLNLGNTCYMNSVMQAL 343
GL+N+GNTCYMN+ +QAL
Sbjct: 124 GLMNIGNTCYMNAALQAL 141
>SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 36.3 bits (80), Expect = 0.093
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 538 RRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCS 597
++D + F G+ + C +C+ + F L + H++Q LE + +
Sbjct: 116 KQDQLFKKTFCGMFADQKICKECNHRYEREEAFYSLPVT------VKNHNLQDSLEQFVN 169
Query: 598 KESLSGDNKYQCRDC 612
E L GDN Y C C
Sbjct: 170 GEILEGDNAYFCEKC 184
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 325 VGLLNLGNTCYMNSVMQAL 343
VGL N G TCYMNSV+Q L
Sbjct: 5 VGLKNAGATCYMNSVLQQL 23
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 35.9 bits (79), Expect = 0.12
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 541 SIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKES 600
S+I +FGG L + V T S+ + + F LQL D S ++ L + KE
Sbjct: 486 SLISDIFGGCLRSSVHQTGAKESA-NVEPFFCLQL---DIQNVS--CIEDALNHLTVKEE 539
Query: 601 LSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNF 638
L G + C D R V E PK LIL LK F
Sbjct: 540 LQG---FTCSKTNAQIDVSRRVSFEVLPKVLILHLKRF 574
>SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 35.9 bits (79), Expect = 0.12
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 326 GLLNLGNTCYMNSVMQALLVT 346
GL+NLGNTC+MN ++QAL T
Sbjct: 40 GLINLGNTCFMNCIVQALTHT 60
>SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)
Length = 543
Score = 35.5 bits (78), Expect = 0.16
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHFSTHVM 354
GL N G TCY+NS++Q L +T F+ +++
Sbjct: 43 GLQNQGGTCYLNSLIQTLFLTPEFTENIL 71
>SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 1485
Score = 35.1 bits (77), Expect = 0.22
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 547 FGGVLLTRVECTDCHSSS-LSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLSGDN 605
F G + +C C++ L+ D+F + +K E + +E + ++E+L +N
Sbjct: 73 FEGNITYAYKCVACNAQERLNSDIFDCITAEIAEKGEGIAIGTKDCVEEFWNEETLGTEN 132
Query: 606 KYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQT 648
K C C E+ V YL+L + + + +++QT
Sbjct: 133 KVICHKCNLKTTTEKEV-------YLVLYEREDQKDVSVKIQT 168
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 35.1 bits (77), Expect = 0.22
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 171 KALEENEKFEILLDVSLENLEKLFLAL--GEPGTLRT--SEADVVIHILASLREQQEALD 226
K +EE E+ +I L+ L+K ++ G T +AD + A +RE +E LD
Sbjct: 42 KYMEEIEQLKIRHAEELDQLKKDMASVIQASVGNCSTPSKDADGTAQLKARVRELEEELD 101
Query: 227 KIATNVRKVLGNLAADSRQSSRQHLQ-NVVDIVNAMVD--YKMEPLKGEPLETFKDKYED 283
++ K L + D++Q ++ +++ ++ A+ Y +EP E LE + YE+
Sbjct: 102 ELNAKYDKEL-RIQRDAQQKELDQIRVDMMTVIQAIKSQKYDLEP-DEEQLEQVRRDYEE 159
Query: 284 LISCL-EYHMA 293
I+ L E H A
Sbjct: 160 QIARLQEEHQA 170
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 34.7 bits (76), Expect = 0.28
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 256 DIVNAMVDYKMEPLKGEPLETFKDKYEDLISCLEYHMASR--WSRFKHLPPWRPRGLPAS 313
D+ A+ E G+P + + +D+ LE + + K PW P +
Sbjct: 166 DLEKAIALSLQESQAGQP-QGITAEEQDISRVLEASLIENKPGQKRKRGDPWMMFVDPVN 224
Query: 314 PPNSKQAPARKVGLLNLGNTCYMNSVMQ 341
P + K+ VG N+GNTC+ ++V+Q
Sbjct: 225 PYDRKRVEGTPVGFKNVGNTCWFSAVIQ 252
>SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHFSTHVMMK 356
GL NLGNTC+MNS +Q L T + + + K
Sbjct: 223 GLANLGNTCFMNSGLQCLSNTMTLTKYFLSK 253
>SB_21866| Best HMM Match : UCH (HMM E-Value=0)
Length = 2165
Score = 34.3 bits (75), Expect = 0.38
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 283 DLISCLEYHMASRWSRFKHLPPWRPRGLPASPPNSKQAPARKVGLLNLGNTCYMNSVMQA 342
D++ + Y S + ++HLPP PR VGL N G TCYMNSV+Q
Sbjct: 1225 DMLLDMYYSDNSSVTEWEHLPPIGPRPYMGY-----------VGLKNAGATCYMNSVIQQ 1273
Query: 343 LLV 345
L +
Sbjct: 1274 LFM 1276
Score = 33.5 bits (73), Expect = 0.66
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 584 SQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFE 641
+ S+ +E + + L G N Y C C D + + I P+ + + LK F ++
Sbjct: 1449 NHQSLHDSMEQFVKGDLLEGANAYHCEKCDKKVDTVKRMCISKLPRVMAIQLKRFDYD 1506
>SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 33.1 bits (72), Expect = 0.87
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 326 GLLNLGNTCYMNSVMQAL 343
GL NLGNTCYMN+ +Q L
Sbjct: 98 GLNNLGNTCYMNATVQCL 115
>SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18)
Length = 457
Score = 33.1 bits (72), Expect = 0.87
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 325 VGLLNLGNTCYMNSVMQALLVTRHFSTHVMMKMN 358
VGL+N TCY+NS++Q L +T F + +++
Sbjct: 207 VGLVNQAMTCYLNSLLQTLYMTPEFRNAIYNQLS 240
>SB_44015| Best HMM Match : TPR_2 (HMM E-Value=7.3e-07)
Length = 635
Score = 32.3 bits (70), Expect = 1.5
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 187 LENLEKLFLALG---EPGTLRTSEADVVIHILASLREQQEALDKIATNVRKVLGNLAADS 243
L ++ F +LG E G L+T AD++ H +++ + LD + + + D
Sbjct: 77 LTRTDEFFQSLGNTQEKGMLKTP-ADMIEHESGDSKDESDVLDMVYVLYNEAVVCYNPDK 135
Query: 244 RQSSRQHLQNVVDIVNAMVDYKMEPLKGEP 273
+ H++NV+ + N D +G P
Sbjct: 136 ASAVLNHIENVLMVNNKQADTSQPTTQGLP 165
>SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 32.3 bits (70), Expect = 1.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 326 GLLNLGNTCYMNSVMQAL 343
GL NLGNTCY+N+ +Q L
Sbjct: 57 GLKNLGNTCYLNATLQML 74
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 532 FDTTFLRRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFP 578
+D R SII +F G L ++V C +C S D F L L P
Sbjct: 488 WDNHIKRNQSIIVDLFQGQLKSQVRCVECGYVSARFDPFTFLSLPLP 534
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 715 ESEFSKLHPNSTPYILFYRRSDMEESS-APTLEELPP 750
E + +K+H +S PY+LFY++ D+ E + P++ + P
Sbjct: 1248 ECDVNKMHVDS-PYLLFYQQDDLNEKAFLPSVRDRTP 1283
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 260 AMVDYKMEPLKGEPLETFKDKYEDLISCLEYHMASRWSRFKHLPPWRPRGLPASPPNSKQ 319
+ V ++ P + PL+ ++++ D + LE + R KHLP R + P K+
Sbjct: 113 SFVQFRCSPQRMTPLDVWEEEKVDGVVLLEQQKSIRIKGEKHLPKLRHKHKKPKPKKEKK 172
Query: 320 APARK 324
+K
Sbjct: 173 KKHKK 177
>SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18)
Length = 957
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 588 VQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERS 621
+Q + ++Y S+ L GD + CRD G++ ER+
Sbjct: 372 LQRIFDFYISRGPLRGDLESICRDIRGIQAVERT 405
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 326 GLLNLGNTCYMNSVMQALLVTRHFSTHVMM 355
GL N GNTC++N+++Q L T + + +M
Sbjct: 1950 GLKNHGNTCFINAIIQCLAHTDLLAEYFVM 1979
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.133 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,696,645
Number of Sequences: 59808
Number of extensions: 945530
Number of successful extensions: 2536
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2473
Number of HSP's gapped (non-prelim): 64
length of query: 775
length of database: 16,821,457
effective HSP length: 88
effective length of query: 687
effective length of database: 11,558,353
effective search space: 7940588511
effective search space used: 7940588511
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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