GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000730-TA|BGIBMGA000730-PA|undefined
         (40 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   4.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   4.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    19   6.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    19   6.3  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           18   8.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           18   8.3  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
          esterase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 16 EVTKLPPNPRRK 27
          + T+LP NPR K
Sbjct: 87 QYTQLPVNPRDK 98


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 16 EVTKLPPNPRRK 27
          + T+LP NPR K
Sbjct: 87 QYTQLPVNPRDK 98


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 10/24 (41%), Positives = 10/24 (41%)

Query: 12  GQTTEVTKLPPNPRRKGPNPLESI 35
           GQ   V   PPN    G   L SI
Sbjct: 89  GQNKAVAPYPPNHPLSGSKHLCSI 112


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 10/24 (41%), Positives = 10/24 (41%)

Query: 12  GQTTEVTKLPPNPRRKGPNPLESI 35
           GQ   V   PPN    G   L SI
Sbjct: 89  GQNKAVAPYPPNHPLSGSKHLCSI 112


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/15 (40%), Positives = 8/15 (53%)

Query: 21 PPNPRRKGPNPLESI 35
          P NP  K P P + +
Sbjct: 64 PYNPEHKPPGPKDLV 78


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/15 (40%), Positives = 8/15 (53%)

Query: 21 PPNPRRKGPNPLESI 35
          P NP  K P P + +
Sbjct: 65 PYNPEHKPPGPKDLV 79


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.128    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,323
Number of Sequences: 429
Number of extensions: 405
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 40
length of database: 140,377
effective HSP length: 21
effective length of query: 19
effective length of database: 131,368
effective search space:  2495992
effective search space used:  2495992
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.6 bits)
S2: 35 (18.2 bits)