Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000729-TA|BGIBMGA000729-PA|IPR000886|Endoplasmic
reticulum targeting sequence, IPR002018|Carboxylesterase, type B
(172 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 44 9e-05
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.031
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 30 1.2
SB_48133| Best HMM Match : RYDR_ITPR (HMM E-Value=2) 29 2.1
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_13705| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_17282| Best HMM Match : LRR_1 (HMM E-Value=1.1e-07) 27 8.3
SB_58726| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 43.6 bits (98), Expect = 9e-05
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Query: 39 YFNAFKATSIGESNAKVKGASSGDEICYLFNCEPLVDVYVKVNKDEKHR-DRVFIKKITE 97
Y F S S K KG D+ Y F P +D+ + + E DR I
Sbjct: 432 YLYVFSHRSKNRSIPKWKGVGHKDDTPYEFGF-PFLDLDKALTQQEYDDVDRNVSNYIIT 490
Query: 98 LWSNFVKHGDPTPPNFKGEITWPPVSANKYNMLLIGNKFRIIEPRKEQEMFSFWSDIYEK 157
++NF K G PTP G ITW + + I + R IE ++ +FW+ Y K
Sbjct: 491 FFTNFAKTGHPTPEPVAG-ITWSQYNETYPAYMNITAQPR-IEYNFHEKSMAFWNSYYPK 548
Query: 158 YFNPKTCH 165
+C+
Sbjct: 549 LLETTSCY 556
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 51 SNAKVKGASSGDEICYLFNCEPLVDVYVKVNKDEKHRDRVFIKKITELWSNFVKHGDPTP 110
+N+++K A+ Y F ++ K++++ + + +L+SNF+K GDPTP
Sbjct: 516 NNSRLKWATHSSNADYTFGAPIHNATHIAYTKEDRNVSHLLL----QLYSNFLKFGDPTP 571
Query: 111 PNFKGEITWPPVSANKYNMLLIGNKFRIIEPRKEQEMFSFWSDIYEKYFNPKTCHN 166
+G ITW S + + L + + +I + + E + W+ K N HN
Sbjct: 572 QPVQG-ITWERYSQRQGDYLKVQARPQIAD-KYEPRRVALWNYYIPKIRNFSCQHN 625
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 73 LVDVYVKVNKDEKHRDRVFIKKITELWSNFVKHGDPTPPNFKGEITWPPVSANKYNMLLI 132
L+D+ ++ K + + FI ++W+NF HG P E+TWP +A L I
Sbjct: 504 LIDIGIR--KGIQGPEAGFILNTLKIWANFATHGKPDAG--LAEVTWPEYTAATRQYLSI 559
Query: 133 GNKFRIIEPRKEQEMFSFWSD 153
F +E + E +FW+D
Sbjct: 560 KPNF-TVESKLRAEHVAFWND 579
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 35.5 bits (78), Expect = 0.024
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 39 YFNAFKATSIGESNAKVKGASSGDEICYLFNCEPLVDVYVKVNKDEKHRDRVFIKK-ITE 97
Y F S ES +GA+ D++ +LF + + H++ + I + +
Sbjct: 473 YMYVFDHCSAAES---WRGAAHADDLRFLF----------RNSTQASHKEELDISQAMVT 519
Query: 98 LWSNFVKHGDPTPPNFKGEITWPPVSANKYNMLLIGNKFRIIEPRKEQ--EMFSFWSDIY 155
LW+NF K+G+PTP W + + L IG ++ K +FW+ Y
Sbjct: 520 LWTNFAKYGNPTPFGPVYGSLWNEFNRSDQVYLSIGGPKGVLSMGKNYHGSRTAFWNYFY 579
Query: 156 EKYFN 160
K N
Sbjct: 580 PKLMN 584
>SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 88 DRVFIKKITELWSNFVKHGDPTPPNFKGEITWPPVSAN 125
D F + + +LW+NF K GDP P WP A+
Sbjct: 283 DANFSRDVIQLWTNFAKTGDPNKPR-NASFVWPAYDAH 319
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 57 GASSGDEICYLFNCEPLVDVYVKVNKDEKHRDRVFIKKITELWSNFVKHGDPTPPNFKGE 116
G GD Y F PL+ + ++ DR + ++ NF K+G+PTP G
Sbjct: 449 GVVHGDTTAYKFGV-PLLSAQQHIYDEQ---DRNVSDMLVTMFVNFAKYGNPTPSPVHG- 503
Query: 117 ITWPPVSANKYNMLLIGNKFRIIEPRKEQEMFSFWSDIY 155
W + + L I ++ + +FW++ +
Sbjct: 504 TNWERFNTSNKAYLKIQPNV-VLASKFHPARMAFWNEYF 541
>SB_48133| Best HMM Match : RYDR_ITPR (HMM E-Value=2)
Length = 671
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 123 SANKYNMLLIGNKFRIIEPRKEQEM--FSFWSDIYEKYFNPKTCHNY 167
+AN+Y+ L+ N+F R ++ FWS YE+Y P HN+
Sbjct: 244 NANRYDKFLVVNRFHSDMCRYHSDLTRHHFWSRKYERYGTP---HNH 287
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 58 ASSGDEICYLFNCEPLVDVYVKVNKDEKHRDRVFIKKITELWSNFVKHGDPTPPNFKGEI 117
A+ G + YLF + +D+ VN D DR F K+ +NFVK GD PN
Sbjct: 447 ATHGADNSYLFGGD--LDM-TWVN-DSLKADREFAKRFRTFIANFVKTGD---PNGATVP 499
Query: 118 TWP 120
TWP
Sbjct: 500 TWP 502
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 52 NAKVKGASSGDEICYLFNCEPLVDVYVKVNKDEKHR 87
N + + GD I +L+N E L DVY V K + R
Sbjct: 1587 NWQAEKTKVGDRISFLYNNEILSDVYFLVGKGPQRR 1622
>SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 77 YVKVNKDEKHRDRVFIKKITELWSN 101
Y K++KDEK R R+F TE +N
Sbjct: 590 YRKLSKDEKRRRRIFTSAATESQTN 614
>SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 104 KHGDPTPPNFK----GEITWPPVSANKYNMLLIGNKFRIIEPRKEQEMFSFWSDIY 155
+ G+PT FK ++ W + + NK ++ P ++ MF FW + +
Sbjct: 232 REGEPTIHTFKESRNSDVRWFAIPKQFVDKAHKDNKCKVFSPDFKERMFQFWFNTF 287
>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 28 NVFLYKFNYEGYFNAFKATSIGESNAKVKGASS 60
N ++Y FN+ Y N FK +SN G S
Sbjct: 665 NPYIYAFNHRSYRNEFKKILSWKSNESASGYPS 697
>SB_13705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 65 CYLFNCEPLVDVYVKVNKDEKHRDR 89
CY + E L +Y V+K++K RDR
Sbjct: 620 CYSKSIEVLPSIYATVDKEKKKRDR 644
>SB_17282| Best HMM Match : LRR_1 (HMM E-Value=1.1e-07)
Length = 651
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 64 ICYL-FNCEPLVDVYVKVNKDEKHRDRVFIKKITELWSNFVK 104
+CY+ NC + +++ K D V KITE++S F+K
Sbjct: 178 LCYIPVNCFIICHCLLQICKLSTSSDHVLPVKITEIYSMFLK 219
>SB_58726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 151 WSDIYEKYFNPKT 163
WS IY K+F+PKT
Sbjct: 35 WSSIYPKFFSPKT 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.140 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,600,810
Number of Sequences: 59808
Number of extensions: 273750
Number of successful extensions: 577
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 567
Number of HSP's gapped (non-prelim): 15
length of query: 172
length of database: 16,821,457
effective HSP length: 77
effective length of query: 95
effective length of database: 12,216,241
effective search space: 1160542895
effective search space used: 1160542895
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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