Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000728-TA|BGIBMGA000728-PA|IPR001594|Zinc finger,
DHHC-type
(275 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 77 2e-15
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 73 4e-14
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 73 6e-14
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 72 1e-13
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 48 1e-06
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 28 1.3
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 26 5.1
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 25 8.9
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 25 8.9
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 77.4 bits (182), Expect = 2e-15
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYM 88
C+KC K R+HHCS C+KCIL MDHHC W NCVG+ N ++F+L Y+
Sbjct: 99 CEKCQEYKCDRSHHCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFLECFYL 149
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 72.9 bits (171), Expect = 4e-14
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C KC KPPR++HC C +CI DHHCPW NCVG N R F L++
Sbjct: 402 CLKCFQVKPPRSYHCGACKRCINRYDHHCPWTGNCVGARNHRTFLLFV 449
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 72.5 bits (170), Expect = 6e-14
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMV 86
C C KP R+ HC +C+ C+ DHHC W+NNCVG NARYF+L+++
Sbjct: 160 CSTCKFEKPARSKHCRLCNICVEKFDHHCIWINNCVGLNNARYFFLFLL 208
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 71.7 bits (168), Expect = 1e-13
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVIV 97
C C +PPR HC +CD C+ +DHHC WLN C+G N RY++++++ +V ++
Sbjct: 184 CHTCHLYRPPRASHCHLCDNCVEYLDHHCIWLNTCIGRRNYRYYFIFLLSVVLSALYLTG 243
Query: 98 AG 99
G
Sbjct: 244 LG 245
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 48.4 bits (110), Expect = 1e-06
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 34 AASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVT 93
A +C C P R+HH V +CI DH+C ++ V + N ++FY ++ Y +
Sbjct: 111 APRMCGTCKCWLPDRSHHSRVSMRCIRKFDHYCSFVGKDVCFSNQKFFYQFLFYGFSAAC 170
Query: 94 FVIVA 98
V+++
Sbjct: 171 MVLIS 175
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 84 YMVYMVAGVTFVIVAGIDLGYQV--LWVNDTGGIIPNNDPDLIGHPLRMNQS 133
Y++Y+ G T I++GI LG V L+ N+ I+ P+L G PL+ Q+
Sbjct: 35 YILYICFGTTSYILSGIILGAYVNSLFHNNHSVILNIKHPEL-GEPLKPYQT 85
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 208 SIESHINMRIRKSQPNF-KNPYDFGKKKNWRLFLGL 242
S+ S +N I Q F KNPYD KK + + L L
Sbjct: 206 SLLSDVNRMIVTEQARFIKNPYDNMAKKRFEILLQL 241
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 116 IPNNDPDLIGHPLRMNQSGILVPVKVIDEYDSEHFPRE 153
I N + G + N SG+L+ +++D+Y + P++
Sbjct: 267 IRNAGKFVFGENMDRNSSGLLLSDELLDQYSISNIPKD 304
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 8.9
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 197 SHGRNISRG-ETSIESHINMRIRKSQPNFKNPYDFGKKKNWRLFLGLIQGRTF-LRHVLL 254
S G + +RG + S S + R + + K+ D ++ + GL+Q R++ L
Sbjct: 22 SGGSSFTRGLKNSTLSSTSSRKSSDEKSRKSSEDKRSPQSTVVQPGLLQVTIIEARNLKL 81
Query: 255 PSSHKPAGTGLS 266
PS H PA G+S
Sbjct: 82 PSGHVPANYGVS 93
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.140 0.460
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,433,535
Number of Sequences: 5004
Number of extensions: 62235
Number of successful extensions: 153
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 144
Number of HSP's gapped (non-prelim): 12
length of query: 275
length of database: 2,362,478
effective HSP length: 72
effective length of query: 203
effective length of database: 2,002,190
effective search space: 406444570
effective search space used: 406444570
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 53 (25.4 bits)
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