Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000728-TA|BGIBMGA000728-PA|IPR001594|Zinc finger,
DHHC-type
(275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 75 8e-14
03_03_0043 + 14016958-14017106,14017198-14017291,14018488-140185... 74 1e-13
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 73 3e-13
08_02_1395 - 26737972-26738418,26738505-26738738,26738887-267391... 73 3e-13
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 72 4e-13
11_05_0069 - 18814789-18815326,18815742-18816001,18816077-188166... 71 1e-12
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 71 1e-12
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 70 2e-12
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 67 2e-11
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 66 3e-11
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 64 9e-11
12_01_0934 - 9273325-9273807,9273898-9274062,9274155-9274235,927... 64 2e-10
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929... 63 2e-10
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 63 3e-10
05_04_0438 + 21244735-21244782,21245089-21245274,21245307-212453... 61 8e-10
07_03_1133 - 24199643-24200422,24200786-24200968,24201241-242013... 60 3e-09
04_04_0939 - 29530242-29531087,29531406-29531597,29531690-295317... 60 3e-09
03_02_0110 - 5678057-5678794,5679279-5679470,5679971-5680087,568... 47 2e-05
01_06_1317 - 36251231-36251341,36252514-36252609,36252879-362529... 46 4e-05
02_05_1239 + 35174901-35174903,35175001-35175102,35175180-351752... 44 2e-04
03_02_0535 + 9277995-9278049,9278140-9278274,9278722-9278788,927... 39 0.005
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 38 0.012
07_03_0311 + 16597023-16597220,16598100-16598222,16598410-165984... 34 0.14
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 33 0.33
07_01_1088 + 9995442-9997736 32 0.44
07_03_1720 + 29019578-29020172,29021208-29021383,29022993-29023058 32 0.58
12_01_0596 + 4867388-4867405,4869095-4869151,4869624-4869701,487... 30 2.3
11_06_0422 + 23338125-23339567 29 4.1
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 29 5.4
06_02_0281 + 13714460-13714599,13714796-13714862,13715915-13716220 29 5.4
01_01_1054 + 8330081-8330137,8330229-8330321,8330445-8330504,833... 28 7.1
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 28 9.4
07_01_0232 + 1701612-1701753,1701848-1703280 28 9.4
07_01_0228 + 1669033-1669171,1669268-1669655,1669807-1670569 28 9.4
04_04_1267 - 32257035-32257337,32257423-32257570,32257656-322578... 28 9.4
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 74.5 bits (175), Expect = 8e-14
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 31 ITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
IT C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+FY+++
Sbjct: 164 ITVKTKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFV 218
>03_03_0043 +
14016958-14017106,14017198-14017291,14018488-14018582,
14018658-14018825,14019091-14019163,14019236-14019288,
14019720-14019811,14020141-14020193,14020272-14020397,
14020710-14020955
Length = 382
Score = 74.1 bits (174), Expect = 1e-13
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVY 87
C C +P R HC +CDKC+ DHHC W+NNC+G N RYF ++V+
Sbjct: 162 CSTCKIARPARAKHCRICDKCVARFDHHCGWMNNCIGEKNTRYFVAFLVW 211
>01_01_1220 +
9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 72.9 bits (171), Expect = 3e-13
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+F+L++
Sbjct: 910 CDTCLLYRPPRASHCSICNNCVRKFDHHCPWVGQCIGLRNYRFFFLFI 957
>08_02_1395 -
26737972-26738418,26738505-26738738,26738887-26739183,
26739399-26739581,26739778-26739834,26739960-26740016,
26740228-26740322,26740714-26740765,26740821-26740910
Length = 503
Score = 72.5 bits (170), Expect = 3e-13
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+FY+++
Sbjct: 240 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFV 287
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 72.1 bits (169), Expect = 4e-13
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+FY+++
Sbjct: 125 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGRRNYRFFYMFV 172
>11_05_0069 -
18814789-18815326,18815742-18816001,18816077-18816631,
18816907-18817062
Length = 502
Score = 70.9 bits (166), Expect = 1e-12
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCSVC+ C+ DHHCPW+ C+G N R+F++++
Sbjct: 200 CHTCLLYRPPRCSHCSVCNNCVDRFDHHCPWVGQCIGKRNYRFFFMFI 247
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 70.5 bits (165), Expect = 1e-12
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+F++++
Sbjct: 162 CHTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGKRNYRFFFMFV 209
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 70.1 bits (164), Expect = 2e-12
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 35 ASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMV-----YMV 89
+ +C C +P R+ HCS CD+C+ DHHCPW++NC+G N F+++++ ++
Sbjct: 363 SQLCITCKIVRPVRSKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWEFFMFLILEVSAMII 422
Query: 90 AGVTFVI 96
GVT VI
Sbjct: 423 TGVTAVI 429
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 168 TAHPWKRKAVLFMAIICVSVLFALGTLTVSHGRNISRGETSIESHINMR---IRKSQPNF 224
T HPW V+ ++ + + F + TLTV ISR T+ E MR +R F
Sbjct: 450 TNHPW----VVSFVVMDLFLFFGVITLTVVQASQISRNLTTNEMANAMRYSYLRGPGGRF 505
Query: 225 KNPYDFGKKKNWRLFL 240
+NP+D G +KN FL
Sbjct: 506 RNPFDHGVRKNCSDFL 521
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 66.9 bits (156), Expect = 2e-11
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 35 ASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMV 89
+ +C C +P R+ HCS CD+C+ DHHCPW++NC+G N F++++ V
Sbjct: 398 SQLCITCKIVRPVRSKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWEFFMFITLEV 452
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 182 IICVSVLFALGTLTVSHGRNISRGETSIESHINMR---IRKSQPNFKNPYDFGKKKNWRL 238
I+ + + F + L V I++ T+ E +MR +R F+NP+D G +KN
Sbjct: 495 IMDLFLFFGVAVLAVVQASQIAKNITTNEMANSMRYSYLRGPGGRFRNPFDHGARKNCSE 554
Query: 239 FL 240
FL
Sbjct: 555 FL 556
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 25 LGKGAMITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLY 84
L A + +C C +P R+ HC C C+ DHHCPW++NCVG N F+
Sbjct: 361 LNSSAWTGNWSQLCPTCKIIRPMRSKHCPTCKHCVEQFDHHCPWISNCVGRRNKWDFF-- 418
Query: 85 MVYMVAGVTFVIVAGIDLGYQVLW 108
V++ G T + G +G+ LW
Sbjct: 419 -VFLCMGTTTAFL-GAAIGFHRLW 440
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 64.5 bits (150), Expect = 9e-11
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 32 TEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVG 74
T C+ C+ +PPR+ HCS+C+ C+ DHHCPW+ C+G
Sbjct: 151 TVKVKFCETCLRYRPPRSSHCSICNNCVEKFDHHCPWVGQCIG 193
>12_01_0934 -
9273325-9273807,9273898-9274062,9274155-9274235,
9274347-9274475,9274590-9274661,9274758-9274826,
9275143-9275514,9275590-9275703,9275729-9275848
Length = 534
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 36 SICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFV 95
S C C R+ HC CD+C+ DHHC WLNNC+G N F L M +++ + V
Sbjct: 194 SYCPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASFILLMFFVL--LMLV 251
Query: 96 IVAGIDLGYQVLWVNDTGGI 115
I G + V D+ G+
Sbjct: 252 IEGGTAIAIFVRCFTDSKGL 271
>10_05_0114 +
9294747-9294788,9294883-9294996,9295066-9295173,
9295774-9296145,9296584-9296652,9296754-9296825,
9297070-9297198,9297690-9297770,9298622-9298807,
9299135-9299860
Length = 632
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/71 (38%), Positives = 35/71 (49%)
Query: 30 MITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMV 89
M E C C + HC VCDKC+ DHHC WLNNC+G N + F++ M V
Sbjct: 198 MSEEGMFFCSLCEVEVLQHSKHCRVCDKCVDGFDHHCRWLNNCIGKRNYKRFFILMASAV 257
Query: 90 AGVTFVIVAGI 100
+ + GI
Sbjct: 258 LLLIMQWLVGI 268
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 38 CKKC-ISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVI 96
C C + +PPRT HC CDKC+L DHHC WL C+ N F+ Y+ + +
Sbjct: 133 CSYCRLIQEPPRTKHCHDCDKCVLQFDHHCVWLGTCIAKRNYCRFWWYIFEQTVLTVWTV 192
Query: 97 VAGID---LGYQVLWVNDTGGII 116
I LG V W GI+
Sbjct: 193 AFYIQFFYLGIVVSWWKFAIGIV 215
>05_04_0438 +
21244735-21244782,21245089-21245274,21245307-21245384,
21245385-21245678,21246137-21246262,21246935-21247168,
21247534-21248061
Length = 497
Score = 61.3 bits (142), Expect = 8e-10
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVG 74
C C+ +PPR HCS+C+ C+ DHHCPW+ C+G
Sbjct: 165 CDTCMIYRPPRCSHCSICNNCVERFDHHCPWVGQCIG 201
>07_03_1133 -
24199643-24200422,24200786-24200968,24201241-24201321,
24201439-24201567,24201814-24201885,24201970-24202038,
24202130-24202513,24203813-24203926,24204033-24204074
Length = 617
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 33 EAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
E C C + HC VCDKC+ DHHC WLNNC+G N F++ M
Sbjct: 169 EGMFFCSLCEVEVLKYSKHCRVCDKCVDGFDHHCRWLNNCIGKRNYMRFFILM 221
>04_04_0939 -
29530242-29531087,29531406-29531597,29531690-29531770,
29532300-29532428,29532579-29532650,29532761-29532829,
29533809-29533891,29534101-29534203,29534289-29534402,
29536230-29536274
Length = 577
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 33 EAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGV 92
E A C C + + HC CDKC+ DHHC WLNNCVG N F M +A +
Sbjct: 104 EEALFCTLCNAEVRKNSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYVTFLCLMAVSLAWL 163
Query: 93 TFVIVAGIDLGYQVLWVNDTGGI 115
+ +G+ + V D I
Sbjct: 164 --AVESGVGIAVFVRCFTDKAAI 184
>03_02_0110 -
5678057-5678794,5679279-5679470,5679971-5680087,
5680331-5680402,5680444-5680569,5681086-5681445,
5681944-5682057,5682158-5682199
Length = 586
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 23/97 (23%)
Query: 30 MITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHC-------------------PWLN 70
M E C C + + HC VCDKC+ DHHC WLN
Sbjct: 158 MSEEGMFFCSLCEAEVLKNSKHCRVCDKCVDGFDHHCRVRYTSFVFPNGYTLSPLNNWLN 217
Query: 71 NCVGYYNARYFYLYMVYMV----AGVTFVIVAGIDLG 103
NC+G N + F+L M V +G +I+ +D G
Sbjct: 218 NCIGKRNYKGFFLLMTSAVLLWLSGALVLILCIVDRG 254
>01_06_1317 -
36251231-36251341,36252514-36252609,36252879-36252956,
36253037-36253138,36254509-36254784
Length = 220
Score = 45.6 bits (103), Expect = 4e-05
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 59 ILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVIV 97
I DHHC W+NNCVG+ N + F ++++Y V + +V
Sbjct: 89 IKRKDHHCIWINNCVGHENYKIFLVFVLYAVVASLYSLV 127
>02_05_1239 +
35174901-35174903,35175001-35175102,35175180-35175248,
35176466-35176561,35176724-35176813
Length = 119
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 62 MDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVIV 97
MDHHC W+NNCVGY N + F + ++ G + V
Sbjct: 1 MDHHCVWINNCVGYANYKSFIICVLNATIGSLYSFV 36
>03_02_0535 +
9277995-9278049,9278140-9278274,9278722-9278788,
9278948-9279044,9279156-9279252,9279640-9279680,
9280314-9280379,9281776-9281848,9282390-9282502,
9282916-9283089
Length = 305
Score = 38.7 bits (86), Expect = 0.005
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 47 PRTHHCSVCDKCILNMDHHCPWLNNCV 73
PR HC+ C + DHHCP NC+
Sbjct: 124 PRVRHCNCCKANVRGYDHHCPAFGNCI 150
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 33 EAASICKKCISPKPPRTHHCSVCDKCILNMDHHC 66
E A C C + + HC CDKC+ DHHC
Sbjct: 148 EEALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHC 181
>07_03_0311 +
16597023-16597220,16598100-16598222,16598410-16598448,
16599063-16599288,16599456-16599466
Length = 198
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 34 AASICKKCISPKPPRTHHCSV 54
A C +C + KPPR HHCSV
Sbjct: 175 AQKYCSRCQNGKPPRCHHCSV 195
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHC-PW 68
C +C +P+PP C+VC L M HC PW
Sbjct: 1835 CDRCKNPQPPPDLKCAVCG---LQMHRHCSPW 1863
>07_01_1088 + 9995442-9997736
Length = 764
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 34 AASICKKCISPKPPRTHHCSVCDKCILNMDHHCP-WLNNCVGYYNA---RYFYLYMVYMV 89
A +C ISP R H ++C + +++ CP W + + NA R YM Y++
Sbjct: 502 ATDLCFYHISPSHGREHATTMCIERSSGLNNRCPTWCEKSIHHKNAVQCREMSNYMTYLL 561
Query: 90 AGVTFVIVAGIDLGYQVLWVNDTGGIIPNNDPDL 123
+++ G N+ G++ +P L
Sbjct: 562 FVNPEMLMPGTRRNLFTDAYNELKGVVKEKNPPL 595
>07_03_1720 + 29019578-29020172,29021208-29021383,29022993-29023058
Length = 278
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 85 MVYMVAGVTFVIVAG-IDL----GYQVLWVNDTGGIIPNNDPDLIGHPLRMNQSGILV 137
M + GV + G IDL G V+ V+ TG ++P N+ ++ H L+M +S LV
Sbjct: 201 MTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLV 258
>12_01_0596 +
4867388-4867405,4869095-4869151,4869624-4869701,
4870467-4870549,4870775-4870874,4871384-4871659,
4872198-4872258,4872365-4872465
Length = 257
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 221 QPNFKNPYDFGKKKNWRLFLGLIQGRTFLRHV--LLPSSHKPAGTG 264
Q F+N +FGK+ R F+ + R+FL H L+ K GTG
Sbjct: 173 QSRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTG 218
>11_06_0422 + 23338125-23339567
Length = 480
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 193 TLTVSHGRNISR-GETSIESHINMRIRKSQPNFKNPYDFGKKKNWRLFLGLIQGRTFLRH 251
T+ V R+++R G E HI M PN +P + +K +L + R L +
Sbjct: 413 TVAVKRMRDMNRVGRAEFEEHIRMLGELRHPNVLSPVGYHYRKEEKLIVSEFMPRGSLLY 472
Query: 252 VL 253
VL
Sbjct: 473 VL 474
>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 33 EAASICKKCISPKPPRTH-HCSVCDKCILNMDH 64
E ++C++ + +P H HC V + C+LNM H
Sbjct: 1677 EVLTLCEQSLQMEPDSVHRHCDVLN-CLLNMCH 1708
>06_02_0281 + 13714460-13714599,13714796-13714862,13715915-13716220
Length = 170
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 200 RNISRGETSIESHINMRIRKSQPNFKNP 227
+N S+ +I+ HINM I+ PN + P
Sbjct: 123 QNTSKNIKNIQEHINMNIKNILPNHREP 150
>01_01_1054 +
8330081-8330137,8330229-8330321,8330445-8330504,
8330703-8330975,8331107-8331181,8331269-8331325,
8331409-8331549,8331656-8331706,8331795-8331944,
8331974-8332057,8332171-8332273,8332451-8332527,
8333469-8333704,8334000-8334078,8335123-8335218,
8335735-8335828,8336325-8336423,8336663-8337453
Length = 871
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 123 LIGHPLRMNQSGILVPVKVIDEYDSEHFPREHDLTVPPFTEAQ--RITAHPWKRKAVLFM 180
++G PL +SG+ V++I + E P +TE + +I AHPW + L +
Sbjct: 249 MLGQPLFPGESGVDQLVEIIKVLGTPT-REEIKCMNPNYTEFKFPQIKAHPWHKVQSLSI 307
Query: 181 AIICVSVL 188
+++ +S +
Sbjct: 308 SVVILSAI 315
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 68 WLNNCVGYYNARYFYLYMVYMVAGVTFVIVAGIDLGYQVLWV 109
WLNNCVG N ++ ++ M+ + ++ + I +G VL V
Sbjct: 186 WLNNCVGRKN---YFTFLALMITSLLWLAIE-IGVGIAVLVV 223
>07_01_0232 + 1701612-1701753,1701848-1703280
Length = 524
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 163 EAQRITAHPWKRKAVLFMAIICVSVLFALGTLTVSHGRNISRGETSIESHI 213
E Q + HP+ + F+ + CV+ LG + + +S G TS+++ +
Sbjct: 9 EIQELIHHPYDGRVTSFVVLSCVTA--CLGGILFGYDIGVSGGVTSMDAFL 57
>07_01_0228 + 1669033-1669171,1669268-1669655,1669807-1670569
Length = 429
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 163 EAQRITAHPWKRKAVLFMAIICVSVLFALGTLTVSHGRNISRGETSIESHI 213
E Q + HP+ + F+ + CV+ LG + + +S G TS+++ +
Sbjct: 8 EIQELIHHPYDGRVTSFVVLSCVTA--CLGGILFGYDIGVSGGVTSMDAFL 56
>04_04_1267 -
32257035-32257337,32257423-32257570,32257656-32257893,
32257994-32258351,32258791-32258969,32259071-32259175,
32259539-32260871
Length = 887
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 162 TEAQRITAHPWKRKAVLFMAIICVSVLFA-LGTLTVSHGRNISRGETSIESH 212
T + T + + R + F ++C A + + T+S+GRN++ G+T + ++
Sbjct: 8 TVMEAATTNIFYRPVIFFSVLLCFQYRAAGVASDTLSNGRNLTDGDTLVSAN 59
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.325 0.140 0.460
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,189,023
Number of Sequences: 37544
Number of extensions: 396655
Number of successful extensions: 1058
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1016
Number of HSP's gapped (non-prelim): 46
length of query: 275
length of database: 14,793,348
effective HSP length: 81
effective length of query: 194
effective length of database: 11,752,284
effective search space: 2279943096
effective search space used: 2279943096
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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