Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000728-TA|BGIBMGA000728-PA|IPR001594|Zinc finger,
DHHC-type
(275 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein ... 89 3e-18
At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein ... 84 9e-17
At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein ... 83 2e-16
At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein ... 83 3e-16
At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein ... 81 8e-16
At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein ... 75 4e-14
At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein ... 75 4e-14
At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein ... 73 2e-13
At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein ... 73 2e-13
At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein ... 73 3e-13
At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein ... 73 3e-13
At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein ... 71 8e-13
At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein ... 71 1e-12
At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein ... 70 1e-12
At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein ... 69 5e-12
At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein ... 66 2e-11
At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein ... 65 4e-11
At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein ... 64 7e-11
At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein ... 63 2e-10
At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein ... 61 9e-10
At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein ... 61 9e-10
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ... 60 2e-09
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ... 59 4e-09
At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein ... 58 8e-09
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 56 3e-08
At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein ... 56 3e-08
At5g08090.1 68418.m00943 hypothetical protein 31 0.84
At4g11550.1 68417.m01852 DC1 domain-containing protein contains ... 31 0.84
At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin; g... 29 2.6
At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin; g... 29 2.6
At5g45730.1 68418.m05622 DC1 domain-containing protein contains ... 29 4.5
At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-... 28 7.8
>At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 286
Score = 89.0 bits (211), Expect = 3e-18
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVIV 97
C+KC KPPR HHC VC +C+L MDHHC W+NNCVG+ N + F++++VY V + +V
Sbjct: 99 CQKCSHFKPPRAHHCRVCKRCVLRMDHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLV 158
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 156 LTVPPFTEAQRITAHPWKRKAVLFMAIICVSVLFALGTLTVSHGRNISRGETSIESHINM 215
LTV P E + + ++ R + A + + + ALG L H I + +T+IE H +
Sbjct: 164 LTVEPQDEEEEMGSY--LRTIYVISAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGV 221
Query: 216 RI----RKSQPNFKNPYDFGKKKNWRLFLGLIQGRTFLRHVLLPSSHKPAGTGLSWHTVH 271
R K +K+PYD G +N L LI G L + S H G+G+ + T
Sbjct: 222 RAMWLAEKGGQVYKHPYDIGAYEN----LTLILGPNILSWLCPTSRH--IGSGVRFRTAF 275
Query: 272 NTI 274
++I
Sbjct: 276 DSI 278
>At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 302
Score = 84.2 bits (199), Expect = 9e-17
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVIV 97
C+KC KPPR+HHCSVC +CIL MDHHC W+ NCVG N + F L++ Y T V V
Sbjct: 118 CRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAV 177
Query: 98 A 98
+
Sbjct: 178 S 178
>At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 284
Score = 83.0 bits (196), Expect = 2e-16
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 31 ITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVY 87
+TE C KC + KP RTHHC VC +C+L MDHHC W+NNCVGY N + F++ + Y
Sbjct: 101 VTETRK-CDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGYANYKAFFILVFY 156
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 177 VLFMAIICVSVLFALGTLTVSHGRNISRGETSIESHINMRI----RKSQPNFKNPYDFGK 232
++ I + + LGTL H I+ T+IE + + R RKS ++++ +D G
Sbjct: 189 IVSCGIFMIGLSITLGTLLCWHIYLITHNMTTIEHYDSKRASWLARKSGQSYRHQFDVGF 248
Query: 233 KKNWRLFLG 241
KN LG
Sbjct: 249 YKNLTSVLG 257
>At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 307
Score = 82.6 bits (195), Expect = 3e-16
Identities = 31/58 (53%), Positives = 38/58 (65%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFV 95
C+KC KP R HHCSVC +C+L MDHHC W+ NCVG N +YF L++ Y T V
Sbjct: 129 CRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLV 186
>At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529 DHHC zinc finger domain
Length = 345
Score = 81.0 bits (191), Expect = 8e-16
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 25 LGKGAMITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLY 84
+G GA+ + C C PK PRTHHC C C+L+MDHHCP++ NCVG N +YF +
Sbjct: 139 VGNGAL--NNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIAF 196
Query: 85 MVYMVAGVTFVIV 97
++ V ++ V
Sbjct: 197 LISAVISTSYAAV 209
>At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 316
Score = 75.4 bits (177), Expect = 4e-14
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVY 87
C C PKP R+ HCS+C++C+ DHHC W+NNC+G N +YF ++++
Sbjct: 162 CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLW 211
>At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 397
Score = 75.4 bits (177), Expect = 4e-14
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVY 87
C C PKP R+ HCS+C++C+ DHHC W+NNC+G N +YF ++++
Sbjct: 162 CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLW 211
>At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 476
Score = 73.3 bits (172), Expect = 2e-13
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 31 ITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMV 86
IT C C+ +PPR HCS+C+ C+ DHHCPWL C+G N R+++++++
Sbjct: 153 ITVKIKYCDTCMLYRPPRASHCSICNNCVEKFDHHCPWLGQCIGLRNYRFYFMFVL 208
>At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 477
Score = 72.9 bits (171), Expect = 2e-13
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 32 TEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
T C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+F++++
Sbjct: 142 TVKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMFI 195
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 180 MAIICVSVLFALGTLTVSHGRNISRGETSIESHINMRIRKSQPNFKNPYDFGKKKN-WRL 238
+ + C ++ +G LT+ H I +T+ E N R R + +NPY+ G N W +
Sbjct: 237 LIVYCFITVWFVGGLTIFHSYLICTNQTTYE---NFRYRYDKK--ENPYNKGILGNIWEI 291
Query: 239 FLGLI 243
FL I
Sbjct: 292 FLSKI 296
>At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 374
Score = 72.5 bits (170), Expect = 3e-13
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N RYF++++
Sbjct: 138 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFV 185
>At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 443
Score = 72.5 bits (170), Expect = 3e-13
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 31 ITEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
IT C C+ +PPR HCS+C+ C+ DHHCPW+ C+G N R+F++++
Sbjct: 144 ITFKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGMRNYRFFFMFV 198
>At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 262
Score = 70.9 bits (166), Expect = 8e-13
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 10/60 (16%)
Query: 38 CKKCISPKPPRTHHCSVC----------DKCILNMDHHCPWLNNCVGYYNARYFYLYMVY 87
C KC + KPPR HHCSVC +C+L MDHHC W+ NCVG N ++F L++ Y
Sbjct: 48 CTKCRNVKPPRCHHCSVCKAKSDLFILCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFY 107
>At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain;
low similarity to SP:Q96GR4 Zinc finger DHHC domain
containing protein 12 (Zinc finger protein 400) {Homo
sapiens}
Length = 288
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 35 ASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTF 94
+ +C C +P R+ HC C +C+ DHHCPW++NCVG N RYF +V+++ G
Sbjct: 114 SQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKKNKRYF---LVFVIMGALT 170
Query: 95 VIVAGIDLGYQVLW 108
V G Q LW
Sbjct: 171 SFVGG-TTAVQRLW 183
>At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein /
ankyrin repeat family protein similar to patsas protein
[Drosophila melanogaster] GI:6002770; contains Pfam
profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc
finger domain
Length = 592
Score = 70.1 bits (164), Expect = 1e-12
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 37 ICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFVI 96
+C C +P R HCS CD+C+ DHHCPW++NCVG N F+L+++ V + +I
Sbjct: 344 LCATCKIIRPLRAKHCSTCDRCVEQFDHHCPWVSNCVGKKNKWEFFLFLLLEV--LAMLI 401
Query: 97 VAGIDL 102
G+ L
Sbjct: 402 TGGVTL 407
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 187 VLFALGTLTVSHGRNISRGETSIESHINMR---IRKSQPNFKNPYDFGKKKNWRLFL 240
+ F++ LTV ISR T+ E +R +R F+NPYD G ++N FL
Sbjct: 444 LFFSVAVLTVIQASQISRNITTNEMANALRYSYLRGPGGRFRNPYDLGCRRNCSDFL 500
>At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 410
Score = 68.5 bits (160), Expect = 5e-12
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW+ C+ N R+F++++
Sbjct: 149 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIAQRNYRFFFMFV 196
>At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 386
Score = 66.5 bits (155), Expect = 2e-11
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 32 TEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
T C C+ +PPR HCS+C+ C+ DHHCPW+ C+ N YF ++
Sbjct: 131 TVKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIALRNYPYFICFI 184
>At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 340
Score = 65.3 bits (152), Expect = 4e-11
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C +PPRT HC CD+C+L DHHC WL C+G N F+ Y+
Sbjct: 164 CGYCHVEQPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNHSKFWWYI 211
>At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 339
Score = 64.5 bits (150), Expect = 7e-11
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 32 TEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVG---YYNARYFY 82
T C C+ +PPR HCS+C+ C+ DHHCPW+ C+ Y N RY Y
Sbjct: 167 TIKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIARTTYENFRYRY 220
>At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 338
Score = 63.3 bits (147), Expect = 2e-10
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 32 TEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
T C C +PPR HCS+C+ C+ DHHCPW+ C+ N +F ++
Sbjct: 138 TVKVKFCDTCQLYRPPRAFHCSICNNCVQRFDHHCPWVGQCIALRNYPFFVCFL 191
>At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMV 86
C C + HC VCDKC+ DHHC WLNNC+G N R F+ MV
Sbjct: 165 CSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLMV 213
>At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMV 86
C C + HC VCDKC+ DHHC WLNNC+G N R F+ MV
Sbjct: 165 CSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLMV 213
>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 499
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 36 SICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGVTFV 95
S C C + HC C++C+ DHHC WLNNCVG N F L MV+++ + +
Sbjct: 149 SYCSLCDLEVKRSSKHCRTCNRCVEGFDHHCRWLNNCVGKKNYTTFILLMVFVL--LMLI 206
Query: 96 IVAGIDLGYQVLWVNDTGGI 115
I G L V D G+
Sbjct: 207 IEGGTALAVFVRCFVDKKGM 226
>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 565
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 33 EAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGV 92
E A C C + + HC C KC+ DHHC WLNNCVG N Y+ V ++A
Sbjct: 141 EEALFCSLCNAEVRMFSKHCRSCGKCVDGFDHHCRWLNNCVGQKN----YISFVCLMAAS 196
Query: 93 TFVIVAGIDLGYQV 106
F ++A +G V
Sbjct: 197 FFWLIAEFGVGVTV 210
>At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 718
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 33 EAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAGV 92
E A C C + + HC CDKC+ DHHC WLNNCVG N Y + V+ +
Sbjct: 171 EEALFCTLCNAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCVGRKN--YMTFISLMAVSLL 228
Query: 93 TFVIVAGIDLGYQV-LWVN 110
+I AG+ + V ++VN
Sbjct: 229 WLLIEAGVGIAVIVRVFVN 247
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 56.0 bits (129), Expect = 3e-08
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYM 85
C C+ +PPR HCS+C+ C+ DHHCPW N RYF++++
Sbjct: 138 CDTCMLYRPPRCSHCSICNNCVERFDHHCPW-------RNYRYFFMFV 178
>At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 706
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 32 TEAASICKKCISPKPPRTHHCSVCDKCILNMDHHCPWLNNCVGYYNARYFYLYMVYMVAG 91
+E A C C + HC CDKC+ DHHC WLNNCVG N + ++ M A
Sbjct: 168 SEEALFCTLCNCEVRKFSKHCRSCDKCVDCFDHHCKWLNNCVGRKN---YVTFVSLMSAS 224
Query: 92 VTFVIV 97
+ ++I+
Sbjct: 225 LLWLII 230
>At5g08090.1 68418.m00943 hypothetical protein
Length = 322
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 79 RYFYLYMVYM---VAGVTFVIVAGIDLGYQVLWVNDTGGII 116
RY YLY +Y+ VA + F+IVA ++ V W++ G++
Sbjct: 92 RYVYLYSIYITSSVAYILFLIVAEVEDNVSVDWISHMLGLL 132
>At4g11550.1 68417.m01852 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 668
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 50 HHCSVCDKCILNMDHHCPWLNNCVGYYNARY 80
H C +CDK I+++ +HC + V Y A+Y
Sbjct: 80 HICDICDKRIVDLCYHCEICDFNVDLYCAKY 110
>At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 190
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 87 YMVAGVTFVIVAGIDLGYQVLWV-NDTGGIIPNNDPDLIGHPLRMNQSG 134
++V G T + G+ +LW+ G+ P N+P G P + +Q G
Sbjct: 62 FLVGGATAAVALGVTAFALILWLFKHRIGVKPKNNPAPKGAPTKADQPG 110
>At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 244
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 87 YMVAGVTFVIVAGIDLGYQVLWV-NDTGGIIPNNDPDLIGHPLRMNQSG 134
++V G T + G+ +LW+ G+ P N+P G P + +Q G
Sbjct: 62 FLVGGATAAVALGVTAFALILWLFKHRIGVKPKNNPAPKGAPTKADQPG 110
>At5g45730.1 68418.m05622 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 519
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 38 CKKCISPKPPRTHHCSVCDKCILNMDHHCPWLN 70
C+ C SP +HCS+C+ ++D C WLN
Sbjct: 90 CQFCRSPLVDLMYHCSICN---FSVDLRC-WLN 118
>At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-2)
identical to GI:16269
Length = 359
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 52 CSVCDKCILNMDHHCPWLNNCVG--YYNARYFY-LYMVYMVAGVTFVI 96
C CD C M+++CP G YY+ Y Y +MV FVI
Sbjct: 99 CGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVI 146
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.325 0.140 0.460
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,437,793
Number of Sequences: 28952
Number of extensions: 325832
Number of successful extensions: 967
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 918
Number of HSP's gapped (non-prelim): 45
length of query: 275
length of database: 12,070,560
effective HSP length: 80
effective length of query: 195
effective length of database: 9,754,400
effective search space: 1902108000
effective search space used: 1902108000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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