Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000727-TA|BGIBMGA000727-PA|IPR001841|Zinc finger,
RING-type, IPR003111|Peptidase S16, lon N-terminal
(371 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 176 3e-44
SB_57670| Best HMM Match : LON (HMM E-Value=6.8e-07) 134 8e-32
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 62 7e-10
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 46 7e-05
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 44 2e-04
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 44 3e-04
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 43 5e-04
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 43 5e-04
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 5e-04
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 43 5e-04
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 42 6e-04
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 42 8e-04
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 41 0.001
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 41 0.001
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 40 0.002
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 40 0.002
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 40 0.004
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 39 0.006
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.008
SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14) 39 0.008
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.008
SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048) 38 0.010
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 38 0.010
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 38 0.010
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 38 0.017
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 38 0.017
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 37 0.023
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.023
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.023
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 37 0.023
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 37 0.023
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 37 0.023
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 37 0.023
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 37 0.030
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 37 0.030
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 36 0.040
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 36 0.053
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 36 0.053
SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064) 36 0.053
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 36 0.053
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 36 0.053
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 36 0.070
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 36 0.070
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 36 0.070
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 36 0.070
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 36 0.070
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 36 0.070
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 36 0.070
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 36 0.070
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 35 0.093
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 35 0.093
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 35 0.093
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 35 0.093
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 35 0.093
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 35 0.093
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09) 35 0.12
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.12
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.12
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 35 0.12
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 35 0.12
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 35 0.12
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.12
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 34 0.16
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05) 34 0.16
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.21
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 34 0.21
SB_12595| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.21
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.21
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 34 0.21
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 34 0.21
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 33 0.28
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 33 0.37
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 33 0.49
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12) 33 0.49
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 33 0.49
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 33 0.49
SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028) 33 0.49
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 33 0.49
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 32 0.65
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 32 0.65
SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05) 32 0.65
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 32 0.65
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.86
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.86
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 32 0.86
SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08) 32 0.86
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 31 1.1
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 31 1.5
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_56038| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_17267| Best HMM Match : WSC (HMM E-Value=2e-12) 30 2.6
SB_37013| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 29 4.6
SB_26072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 29 4.6
SB_6012| Best HMM Match : UBA (HMM E-Value=4.8e-05) 29 4.6
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 29 6.1
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 29 6.1
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_1522| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_58016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_48253| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12) 29 6.1
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_25458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 29 6.1
SB_5186| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 29 8.0
SB_36807| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_8245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 29 8.0
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012) 29 8.0
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 29 8.0
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 176 bits (428), Expect = 3e-44
Identities = 96/260 (36%), Positives = 137/260 (52%), Gaps = 12/260 (4%)
Query: 54 RKEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLN-- 111
R+E+A + + C LCC +PVTTPCGH +CR C+ RS+D+ C +C L
Sbjct: 365 RQESAME-MTVEEFECTLCCRLFYNPVTTPCGHVFCRACLNRSLDHRPGCPICRSSLTQN 423
Query: 112 -----DFDLSTTGGTIFIRAMLA---SVGALRXXXXXXXNVMPIFICTVAYPSIPCPLFI 163
+ L T + L + L +P+F+CT+A+P IPCPL I
Sbjct: 424 VTVAIEMLLKTFFPKDYEDRKLQHEEDMAMLASIASNTSEEIPVFVCTLAFPLIPCPLHI 483
Query: 164 FDPRYRLMVRRVLESETRKFGMVACERNGGGSEYGTILQVCDCIHMEDGRSILSTVGVSR 223
F+PRYRLMVR+ +ES R+FGM + SE+GT+L+V + ++ DGRS + TVG R
Sbjct: 484 FEPRYRLMVRQCMESGARQFGMCMYDDEHDFSEFGTMLEVREVRYLPDGRSFVDTVGGRR 543
Query: 224 FRVLETGVRDGYDIARVQVITDLIPEDSIQICDLRVTAVHICYKALSWLNSMHETVYSEI 283
F+VL G+RDGY +ARV+ I D +P + DL+ + +A W NS+ V I
Sbjct: 544 FKVLSRGMRDGYSVARVEWIQD-VPVSEEHLPDLKEFHRAVYDQASRWFNSLPLLVRRRI 602
Query: 284 VSAFGNMPQMDETWWRTPDG 303
V +MP P G
Sbjct: 603 VQTVSDMPAWQNDTETLPHG 622
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 43 RRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK 102
+RLT F A K++ KS ++CV CC L+ P T PCGHT C C+ +S K
Sbjct: 78 KRLTD--FHARNKQSTLE-TKSRILSCVRCCGILLGPCTLPCGHTVCEKCLSKSQAK--K 132
Query: 103 CALCLRPLNDFDL 115
C C + FDL
Sbjct: 133 CVDCGEDYSSFDL 145
>SB_57670| Best HMM Match : LON (HMM E-Value=6.8e-07)
Length = 224
Score = 134 bits (325), Expect = 8e-32
Identities = 69/205 (33%), Positives = 118/205 (57%), Gaps = 2/205 (0%)
Query: 145 MPIFICTVAYPSIPCPLFIFDPRYRLMVRRVLESETRKFGMVAC--ERNGGGSEYGTILQ 202
+PIFICT+A+P++ CPL IF+PRYRLM+RR +ES +R+FGM + + + +GT+L+
Sbjct: 9 IPIFICTLAFPTVQCPLHIFEPRYRLMIRRCVESGSRRFGMCTAGDDPSKPFATFGTMLK 68
Query: 203 VCDCIHMEDGRSILSTVGVSRFRVLETGVRDGYDIARVQVITDLIPEDSIQICDLRVTAV 262
+ D +++DGRSI++T+G RF V ++DGY +A+V+ + D + ED + +++ +
Sbjct: 69 IKDVQYLQDGRSIINTIGTRRFSVQSYNMKDGYYVAKVKWVKDDVEEDVEEKAEIQKATL 128
Query: 263 HICYKALSWLNSMHETVYSEIVSAFGNMPQMDETWWRTPDGXXXXXXXXXXXXXRTEIKV 322
W NS++E I A G MP D DG + + K+
Sbjct: 129 TGFAMLQLWFNSLNEEQQKCITDAIGPMPNCDPNMHVQQDGPEWVWWSLAALPLQDKPKL 188
Query: 323 LILSTRCLMKRLTAVSRTLEAIDQI 347
+IL+ + ++RL ++ R L + Q+
Sbjct: 189 IILAMKSTIERLRSIQRFLMLMIQM 213
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 62.1 bits (144), Expect = 7e-10
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 55 KEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPL 110
+ AS+ + D C LC + L++PVT+ CGH++CR C+ RS+D+ ++C C PL
Sbjct: 316 RSPASNTEQLDDFECKLCFNLLLEPVTSLCGHSFCRDCLYRSLDHRVECPCCRAPL 371
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
+S C LC VDPVT CGHTYC C++
Sbjct: 16 RSRFFECGLCGDFYVDPVTILCGHTYCLACIK 47
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 45.6 bits (103), Expect = 7e-05
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVERSM-DYNIKCALC 106
D C +C LV+PV PC H +C+ C +++ + N++C +C
Sbjct: 34 DFTCPICLQLLVEPVVLPCEHEFCKMCFTQNVQEANLQCPMC 75
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 44.0 bits (99), Expect = 2e-04
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 65 SDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCAL 105
SD+ C LC DP C HTYCR C+E ++++ +C +
Sbjct: 13 SDVTCSLCLGQYQDPRVLACLHTYCRHCLESLVEHSKECTV 53
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 44.0 bits (99), Expect = 2e-04
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 65 SDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCAL 105
SD+ C LC DP C HTYCR C+E ++++ +C +
Sbjct: 22 SDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTV 62
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 43.6 bits (98), Expect = 3e-04
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALC 106
C C + + DP PC H+ C+TC+E+ ++ +KC +C
Sbjct: 19 CPACSNVIKDPRILPCLHSICKTCLEKQLNGCLKCPVC 56
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 42.7 bits (96), Expect = 5e-04
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 65 SDINCVLCCSTLVDPVTTPCGHTYCRTC----VERSMDYNIKCALC 106
SD+ C LC DP C HTYCR C VE S + + C C
Sbjct: 13 SDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQC 58
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 42.7 bits (96), Expect = 5e-04
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCAL 105
D+ C LC DP C HTYCR C+E ++++ +C +
Sbjct: 13 DVTCCLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTV 52
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 42.7 bits (96), Expect = 5e-04
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 SSDINCVLCCSTLVDPVTTPCGHTYCRTCVER 95
S D C +C + DP+ T CGH+YC+ C+++
Sbjct: 25 SDDSMCAICHIVVKDPILTSCGHSYCKCCIQK 56
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 42.7 bits (96), Expect = 5e-04
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 65 SDINCVLCCSTLVDPVTTPCGHTYCRTC----VERSMDYNIKCALC 106
SD+ C LC DP C HTYCR C VE S + + C C
Sbjct: 13 SDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQC 58
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 42.3 bits (95), Expect = 6e-04
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
D+ C+LC DP PC HTYC+ C+E
Sbjct: 13 DVTCLLCLDIFTDPRLLPCLHTYCKKCLE 41
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 41.9 bits (94), Expect = 8e-04
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 68 NCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLN 111
+C +C PV PCGH +C C++ + KCA+C +P++
Sbjct: 70 DCPVCLQQASYPVRLPCGHMFCFLCIKGVALRSRKCAICRQPIS 113
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 67 INCVLCCSTLVDPVTT-PCGHTYCRTCVERSMDYNIKCALC 106
I CVLC LVD T C H++CR C+ R ++ + +C +C
Sbjct: 46 IICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 86
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLNDFDL 115
D C +C L DP+ T CGH +C C+ + N C L L DL
Sbjct: 54 DFKCGICFGVLEDPLVTTCGHVFCSQCLVHWIAENGTCPLTCEQLAIDDL 103
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 67 INCVLCCSTLVDPVTT-PCGHTYCRTCVERSMDYNIKCALC 106
I CVLC LVD T C H++CR C+ R ++ + +C +C
Sbjct: 14 IICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 54
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALC 106
C++C T +PV T C H +C C + N KC +C
Sbjct: 245 CIMCRKTFKNPVVTKCLHYFCEACALQHYKKNSKCFVC 282
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK----CALC 106
++ C +C DP PC HT+CR C+E +++ K C LC
Sbjct: 12 EVTCAICIEHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLC 56
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 39.5 bits (88), Expect = 0.004
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCV----ERSMDYNIKCALC 106
D+ C LC DP C HTYCR C+ E S +I C C
Sbjct: 13 DVTCCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQGDSISCPQC 57
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 64 SSDINCVLCCSTLVDPVTTPCGHTYCRTCV 93
S + C LC DPV T CGHT+C+ C+
Sbjct: 189 SPKLFCPLCRRVFKDPVITSCGHTFCQACI 218
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 55 KEAASSWLKSSDINCVLCCSTLVDPVTTP---CGHTYCRTCVERSMDYNIKCALCLRPL- 110
+ AA + +C +C T CGH YC C+ R ++ N C +C +P
Sbjct: 248 RNAAKGKKRYESKSCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRKPTS 307
Query: 111 -NDFDLST 117
ND +L +
Sbjct: 308 RNDDELGS 315
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 39.1 bits (87), Expect = 0.006
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALC 106
C +CC+ + PC H CR+C+ R + N +C C
Sbjct: 430 CPICCAMRISVRFLPCRHVSCRSCITRHLMNNKECFFC 467
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 38.7 bits (86), Expect = 0.008
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 24 QARVLLTQAIAVLIQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVT-T 82
+ V+ T + L++ R GR++ R R K+ + I CVLC LVD T
Sbjct: 1330 RGEVVETGSPTELLERRAGRKMLR---RMALKDL------NPHIICVLCGGYLVDATTIV 1380
Query: 83 PCGHTYCRTCVERSMDYNIKCALC 106
C H++CR+C+ + + C +C
Sbjct: 1381 ECLHSFCRSCIVSWLQASYHCPVC 1404
>SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)
Length = 1071
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMD-----YNIKCALC 106
I C C T+ DPV PC + CR+C ++S +N+ C LC
Sbjct: 117 ITCPSCKETMNDPVLLPCLDSICRSCCQKSAQKHGNMWNVLCRLC 161
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 38.7 bits (86), Expect = 0.008
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K+ + +C +C L P+++ C H+ C C E + D K C +C L D
Sbjct: 19 KNEEFHCAICLDVLEKPLSSKCQHSCCSDCWESAFDLGEKHPACPICQETLAD 71
>SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048)
Length = 233
Score = 38.3 bits (85), Expect = 0.010
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 23 RQARVLLTQAIAVLIQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLV-DPVT 81
+ +++L + ++ +++ +L L + + K ++ +CC LV PVT
Sbjct: 58 KASQILSDEQKGLIAEDKENVKLWEELLTDTTLDYTAFHQKVEELFACVCCQDLVLYPVT 117
Query: 82 TPCGHTYCRTCVERSMDYNI-KCALC 106
T C H C+ C++RS + C C
Sbjct: 118 TKCLHNICKGCLQRSFKAEVFTCPYC 143
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 38.3 bits (85), Expect = 0.010
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 69 CVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYNIKCALCLRP 109
C +C T+ P T CGHT+CR C+ + + C C P
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTCRDP 719
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 38.3 bits (85), Expect = 0.010
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 69 CVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYNIKCALCLRP 109
C +C T+ P T CGHT+CR C+ + + C C P
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTCRDP 794
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVER---SMDYNIKCALC 106
++ C +C +P PC HT+C+ C+E+ S N+ C C
Sbjct: 19 ELTCSVCLEQFREPKMLPCFHTFCKECLEKTKQSFRGNLLCPTC 62
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 37.5 bits (83), Expect = 0.017
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK 102
C +C L V TPCGH++C C+E M+ ++
Sbjct: 18 CGICAEVLERAVLTPCGHSFCGVCLETWMNAKLE 51
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 37.1 bits (82), Expect = 0.023
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 43 RRLTRVLFRAVRKEAASSWLKSSDIN----CVLCCSTLVDPVT-TPCGHTYCRTCV---- 93
R F A KE LK SD+N C LC L+ P T T C HT+C++C+
Sbjct: 37 RNAENPFFAASNKERT---LKLSDLNPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYL 93
Query: 94 ERSMDYNI-KCALCLRPLNDFDL 115
+ S D C + N FDL
Sbjct: 94 QDSEDNTCPSCNTVIHETNPFDL 116
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 37.1 bits (82), Expect = 0.023
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMD--YNIK-CALC 106
C +C L P+ TPC H +C C+ +D YN C +C
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVC 200
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 37.1 bits (82), Expect = 0.023
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 65 SDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLND 112
S+ C C + P+ T CGH C C + ++ C LC + + +
Sbjct: 14 SEFLCSYCRKVYLHPLVTGCGHVLCTKCYNKRSKKHLGCPLCGKSMGE 61
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 37.1 bits (82), Expect = 0.023
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 45 LTRVLFRAVRKEAASSWLKSSD-INCVLCCSTLVDPVTTPCGHTYCRTCVE 94
+ R+L + + A S+ + D + C LC DP PC H++CR C+E
Sbjct: 110 MDRILSFFLEEMATSASRRLEDEVTCSLCIEHFNDPRVLPCLHSFCRHCLE 160
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 37.1 bits (82), Expect = 0.023
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMD--YNIK-CALC 106
C +C L P+ TPC H +C C+ +D YN C +C
Sbjct: 34 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVC 74
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 37.1 bits (82), Expect = 0.023
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMD--YNIK-CALC 106
C +C L P+ TPC H +C C+ +D YN C +C
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVC 200
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 37.1 bits (82), Expect = 0.023
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMD--YNIK-CALC 106
C +C L P+ TPC H +C C+ +D YN C +C
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVC 200
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 36.7 bits (81), Expect = 0.030
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 52 AVRKEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
A +E S + C +C + L D PC HTYCR C+E
Sbjct: 128 ATHRETGSQDDIRQQLACGICHALLRDARVLPCLHTYCRRCIE 170
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 36.7 bits (81), Expect = 0.030
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C L DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHLNDPRVLPCLHSFCRHCLE 40
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 36.3 bits (80), Expect = 0.040
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVE 94
C +C L + +TT CGH++C +C+E
Sbjct: 18 CNICVGVLENAITTICGHSFCESCLE 43
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 36.3 bits (80), Expect = 0.040
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 56 EAASSWLKSSDINCVLCCSTLVDP-VTTPCGHTYCRTCVERSMDYN----IKCALCLR 108
E+ S + S ++ C +C L +P T C H C+ C++R M +N I+C C R
Sbjct: 4 ESHLSQVFSEELTCPVCLEELKEPKCLTSCAHNVCKPCLDR-MTFNGEKEIRCPTCRR 60
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 36.3 bits (80), Expect = 0.040
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 55 KEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLNDFD 114
+ + W C +C T DP PC H++C+ CV + + +C DF
Sbjct: 391 RHGTTFWCIKMSTICGVCRETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDCQADFQ 450
Query: 115 LS 116
+S
Sbjct: 451 MS 452
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 36.3 bits (80), Expect = 0.040
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C LC DP PC H++CR C+E
Sbjct: 12 EVTCSLCIEHFNDPRVLPCFHSFCRHCLE 40
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 35.9 bits (79), Expect = 0.053
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C LC DP PC H++CR C+E
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLE 40
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 35.9 bits (79), Expect = 0.053
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 59 SSWLKSSDIN--CVLCCSTLVDPVTTPCGHTYCRTCVERSM---DYNIKCALC 106
S + S++N C LC +P PC HT+C+ C+E + + + C C
Sbjct: 133 SPMMPGSNVNLFCPLCHEMFANPRLLPCLHTFCKRCLENLVPPRSHTLSCPSC 185
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 35.9 bits (79), Expect = 0.053
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 66 DINCVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYNIKCALC 106
D C +C + ++ PV P CGH+ C +C ER N KC C
Sbjct: 53 DFICNVCGTVMLVPVVMPNCGHSCCSSCAER---VNRKCPEC 91
>SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 349
Score = 35.9 bits (79), Expect = 0.053
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 66 DINCVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYNIKCALC 106
D C +C + ++ PV P CGH+ C +C ER N KC C
Sbjct: 53 DFICNVCGTVMLVPVVMPNCGHSCCSSCAER---VNRKCPEC 91
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 35.9 bits (79), Expect = 0.053
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C LC DP PC H++CR C+E
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLE 40
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 35.9 bits (79), Expect = 0.053
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSM 97
C +C L +P+ T CGH C +C E S+
Sbjct: 34 CTICKHVLQEPLQTTCGHRICESCFELSL 62
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 35.9 bits (79), Expect = 0.053
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYN---IKCALCLRPLNDFDL 115
C +C L DP T C H +C C+ ++ +C +C P+N +L
Sbjct: 65 CPICLDPLDDPSITRCAHVFCTGCLTDVIENEGLAPRCPMCRAPVNQNEL 114
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVRCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 11 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 39
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 35.5 bits (78), Expect = 0.070
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCV 93
C +C L +P+ PC H+YC CV
Sbjct: 18 CCICRDVLEEPLMAPCEHSYCSACV 42
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 35.1 bits (77), Expect = 0.093
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 35.1 bits (77), Expect = 0.093
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 162 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLAD 214
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 35.1 bits (77), Expect = 0.093
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 35.1 bits (77), Expect = 0.093
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 17 EVTCSICIEHFDDPRVLPCLHSFCRHCLE 45
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 35.1 bits (77), Expect = 0.093
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 64 SSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALC 106
+++ C +C T D V + CGH +C C+ R ++ ++C
Sbjct: 58 NANFECNICLDTARDAVISMCGHLFCWPCLHRWLETRPNRSMC 100
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 70 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLAD 122
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 310 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLAD 362
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 636 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLAD 688
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 168 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLAD 220
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 313 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLAD 365
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 35.1 bits (77), Expect = 0.093
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 35.1 bits (77), Expect = 0.093
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++CR C+E
Sbjct: 11 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 39
>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
Length = 474
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 65 SDINCVLCCSTLVDPVTTPCGHTY-CRTCVERSMDYNIKCALC 106
+D+ C +C V+ PCGH Y C+TC ++ Y C LC
Sbjct: 402 NDLTCQICMDAEVNTAFCPCGHVYCCQTCAS-NLYY---CPLC 440
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIK---CALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + K C +C L D
Sbjct: 166 KKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGGKHPACPICQETLAD 218
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 34.7 bits (76), Expect = 0.12
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALC 106
C +C T +P PC H++C+ C+++S+ + +C
Sbjct: 17 CGICQETYNNPKVLPCLHSFCQNCLDKSIRSQERVLVC 54
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMD------YNIKCALCLR--PLND 112
C C + +P PC HT+C C+ + N+ C CLR PL D
Sbjct: 15 CPKCMNAYENPKVLPCLHTFCSQCLSEELHRDCEGRLNVTCPKCLRDFPLRD 66
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/83 (19%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 27 VLLTQAIAVLIQNRNGRRLTRV-LFRAVRKEAASSWLKS--SDINCVLCCSTLVDPVTTP 83
V Q + L++ ++ L ++ + + +EA S ++ + +C++C + T
Sbjct: 326 VTSVQELQSLMEKKDRELLKQMEVTKKAEEEARKSVVEEMEDEFSCIVCQELFIRATTLT 385
Query: 84 CGHTYCRTCVERSMDYNIKCALC 106
C H++C C++ + C +C
Sbjct: 386 CSHSFCEYCLQSWLRKRNTCPIC 408
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 34.7 bits (76), Expect = 0.12
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 62 LKSSDINCVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYNIKCALC 106
++ +I+C +C +P+ P CGH+ C C++ N LC
Sbjct: 16 VQREEISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLC 61
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 54 RKEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCVE----RSMDYNIKCALC 106
R + ++ ++ C +C +P T C H CR C+E R I+C LC
Sbjct: 6 RNRTTAMAVQLDELLCPICLDEFKEPKTLSCMHDLCRKCLEDMAARESSRVIRCPLC 62
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 34.3 bits (75), Expect = 0.16
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 69 CVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYN----IKCALC 106
C +C V+P + P C H CR C+E+ N ++C +C
Sbjct: 22 CPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPIC 64
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 34.3 bits (75), Expect = 0.16
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 64 SSDINCVLCCSTLVDPVTTPCGHTYCRTCVE---RSMDYNIKCALC 106
S +NC LC + P PC H++C C+E D C C
Sbjct: 15 SKHLNCSLCHRLIRGPKLLPCLHSFCLACLEDLVTENDVGFNCPQC 60
>SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)
Length = 96
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 64 SSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLNDFDLSTTGGTI 122
S+ + C +C DP PC HT C C+E + N C P+++ +L G I
Sbjct: 17 SNSLVCPICEEEYDDPKRLPCMHTICLGCLESMVPKNALIMKC--PIDEQELPMPMGGI 73
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 69 CVLCCSTLVDPVTT-PCGHTYCRTCVERSMDYNIKCALCLRPLND 112
C+ C L PV PCGH C C + + + +C C+ LN+
Sbjct: 431 CLDCEGLLWYPVQIKPCGHRVCTKCYTKLLSSSARCPGCMDELNE 475
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDY-NIKCALCLRPLND 112
C +C D PCGH C C+E+ + C C P+ D
Sbjct: 185 CKICAENNKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCRSPIKD 229
>SB_12595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 42 GRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPCGHTYCRTCV 93
G + R+ F V + + C C L D V T CGH YC +C+
Sbjct: 34 GTNILRIDFAMVGYKYTDKDTIEASHRCSKCGFILKDAVQTDCGHRYCLSCI 85
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDY-NIKCALCLRPLND 112
C +C D PCGH C C+E+ + C C P+ D
Sbjct: 381 CKICAENNKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCRSPMKD 425
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 54 RKEAASSWLKSSDINCVLCCSTLVDPVTTP-CGHTYCRTCVE----RSMDYNIKCALC 106
+ E S + + + +C +C ++P + P C H CR C+E S I+C +C
Sbjct: 8 KAEKTLSGVINDECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVC 65
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTC---VERSMDYNIKCALCL 107
+I C C DP PC H+ C+ C +E++ + I C +CL
Sbjct: 18 EIWCRYCNGIFEDPRLLPCLHSLCKKCLKDIEQAQEGAIACPVCL 62
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 33.5 bits (73), Expect = 0.28
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 66 DINCVLCCSTLVDPVTT-PCGHTYCRTCVE 94
D C +C DPV T CGH +C +C+E
Sbjct: 39 DYQCPICQLPFRDPVQTRDCGHRFCESCLE 68
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 33.5 bits (73), Expect = 0.28
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 64 SSDINCVLCCSTLVDPVT-TPCGHTYCRTCVERSMDYN---IKCALC 106
+ ++ C +C DP T T C H++C+ C+ + + I C LC
Sbjct: 63 NDELRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLC 109
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 33.1 bits (72), Expect = 0.37
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCV 93
++ C +C DP PC HT+C C+
Sbjct: 13 EVECPICLERFKDPRVLPCLHTFCYECL 40
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 33.1 bits (72), Expect = 0.37
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCV 93
++ C +C DP PC HT+C C+
Sbjct: 13 EVECPICLERFKDPRVLPCLHTFCYECL 40
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 32.7 bits (71), Expect = 0.49
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCVE 94
++ C +C DP PC H++C C+E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCLHCLE 40
>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
Length = 379
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMD-----YNIKCALC 106
I C C T+ PV PC + CR+C +++ + + C LC
Sbjct: 25 ITCPSCKETMNGPVLLPCLDSICRSCCQKTAQKHGDTWTVPCRLC 69
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 65 SDINCVLCCSTLVDPVTTP-CGHTYCRTCVER-SMDYNIKCALC 106
S++ C +C + L D V P CG +YC C+ ++ +C C
Sbjct: 55 SELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTC 98
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMD-----YNIKCALC 106
I C C T+ PV PC + CR+C +++ + + C LC
Sbjct: 25 ITCPSCKETMNGPVLLPCLDSICRSCCQKTAQKHGDTWTVPCRLC 69
>SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028)
Length = 116
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 65 SDINCVLCCSTLVDPVTTP-CGHTYCRTCVER-SMDYNIKCALC 106
S++ C +C + L D V P CG +YC C+ ++ +C C
Sbjct: 55 SELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTC 98
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 36 LIQNRNGRRLTRVLFRAVRKEAASSWLKSS--DINCVLCCSTLVDPVTTPCGHTYCRTCV 93
++ N++ R+ + +++K+A + L + +L + +PV P H +C C+
Sbjct: 68 VLANQHHLRVHKCRDVSLKKDAIKTMLNHQCPTKSAILDLEKVKEPVVCPNQHVFCSPCL 127
Query: 94 ERSMDYNIKCALCLRPLN 111
+ + N C C P+N
Sbjct: 128 DLWLRTNRYCPTCRTPIN 145
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 32.3 bits (70), Expect = 0.65
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDY---NIKCALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + + C +C L D
Sbjct: 112 KKEEFHCAICLDVLGKPLSSKCQHSCCSDCWKSAFELGETHPACPICHETLAD 164
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 67 INCVLCCSTLVDPV-TTPCGHTYCRTCVERSMDYNIKCALCL 107
++C +C +VDP + C H CR C+ + N C CL
Sbjct: 39 LSCRVCRGLVVDPFGSQSCLHYVCRGCLRKKRALNPGCRWCL 80
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 67 INCVLCCSTLVDPV-TTPCGHTYCRTCVERSMDYNIKCALCL 107
++C +C +VDP + C H CR C+ + N C CL
Sbjct: 39 LSCRVCRGLVVDPFGSQSCLHYVCRGCLRKKRALNPGCRWCL 80
>SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05)
Length = 509
Score = 32.3 bits (70), Expect = 0.65
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 69 CVLCCSTL----VDPVTTPCGHTYCRTCVERSMDYNIK 102
C++C L V PV PCGH C C ER ++ I+
Sbjct: 206 CMICSDDLTGADVLPVALPCGHEACCLCWERYLNVKIR 243
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 32.3 bits (70), Expect = 0.65
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 63 KSSDINCVLCCSTLVDPVTTPCGHTYCRTCVERSMDY---NIKCALCLRPLND 112
K + +C +C L P+++ C H+ C C + + + + C +C L D
Sbjct: 112 KKEEFHCAICLDVLGKPLSSKCQHSCCSDCWKSAFELGETHPACPICHETLAD 164
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 31.9 bits (69), Expect = 0.86
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYN------IKCALCL 107
C LC L +P C H YC+ C++ + +KC CL
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETNEAGEKSKILKCPCCL 58
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 31.9 bits (69), Expect = 0.86
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTC---VERSMDYN--IKCALC 106
+ C C + +P TPC H++C C + RS Y I C C
Sbjct: 14 LTCRQCSNVFKNPRITPCLHSFCAECLNEIARSRPYQAYIACPTC 58
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 31.9 bits (69), Expect = 0.86
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVE 94
C +C P PC HTYC CV+
Sbjct: 659 CPICSRPFKSPKILPCLHTYCSDCVK 684
>SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08)
Length = 230
Score = 31.9 bits (69), Expect = 0.86
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCV 93
+I C +C + D V P GH +CR+CV
Sbjct: 16 NIICPICQFIIEDAVCCPQGHIFCRSCV 43
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 69 CVLCCSTLVDPVTTP-CGHTYCRTCVERSMDYN----IKCALC 106
C +C +P + P C H CR C+E+ N ++C +C
Sbjct: 22 CPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPIC 64
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 31.1 bits (67), Expect = 1.5
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 7 AAPHLAHIAASSESYARQARVLLTQAIAVLIQNRNGRRLTRVLFRAVR--KEAASSWLKS 64
A PH AA ESY ++ L +A I + LTR + + A S ++
Sbjct: 230 APPHATPQAAWEESYQQENYETLLN-LAEQIGEAKPKGLTRAEIDQLPTYRVTAESKKQN 288
Query: 65 SDINCVLCCSTLVDPV---TTPCGHTYCRTCVER 95
D CV+C + T PC H Y C+++
Sbjct: 289 DDARCVVCLVDFEEKQLVRTLPCLHEYHTRCIDK 322
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTC-----VERSMDYNIKCALCLRP 109
+NC C +P C HT+C+ C + + +I C LC +P
Sbjct: 14 LNCRACHKVFTEPKILDCLHTFCQKCLGTHDILGAGTNSIVCPLCRKP 61
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 66 DINCVLCCSTLVDPVTTPCGHTYCRTCV-ERSMDY 99
+ C LC T +P C HT+C C+ E+S ++
Sbjct: 95 EAECSLCHKTPSEPKILKCFHTFCNECLTEKSAEF 129
>SB_56038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTP 83
+ NRNG TR+L +AV+ A S +DI+ ++CC+TL+ P
Sbjct: 10 LPNRNGS--TRLLRKAVKNPKAPS----TDISELICCTTLLQGYPNP 50
>SB_17267| Best HMM Match : WSC (HMM E-Value=2e-12)
Length = 255
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 226 VLETGVRDGYDIA-RVQVITDLIPEDS 251
+ +TGVR Y++ V VITD +PEDS
Sbjct: 80 LFDTGVRRSYNLRDEVNVITDRVPEDS 106
>SB_37013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPC 84
+ NR G TR+L +AV+ A+S +DI+ +CC+TL+ PC
Sbjct: 10 LPNRYGS--TRLLRKAVKNPKAAS----TDISERICCTTLLQGYPNPC 51
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 56 EAASSWLKSSDINCVLCCSTLVDPVTTPCGHT-YCRTCVERSMDYNIKCALCLRPLNDFD 114
E S +S+ C++C + V PC H C +C R KC LC + + +
Sbjct: 675 ETPPSQQRSTHGTCIVCQNLPVTRALLPCRHACVCGSCFSR---LESKCPLCRQVIRSYF 731
Query: 115 LS 116
L+
Sbjct: 732 LT 733
>SB_26072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 30 TQAIAVLIQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTP 83
T+ I ++ NR G TR+L +AV+ A S +DI+ +CC+TL+ P
Sbjct: 30 TETIHTVLPNRYGS--TRLLRKAVKNPKAPS----TDISERICCTTLLQGYPNP 77
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 8/39 (20%)
Query: 62 LKSSDINCVLC--CSTLVD-----PVTT-PCGHTYCRTC 92
L + D++ LC C TL+ PV PCGHT+C+ C
Sbjct: 225 LDAEDMSTHLCPLCQTLMSGSRHTPVALIPCGHTFCQMC 263
>SB_6012| Best HMM Match : UBA (HMM E-Value=4.8e-05)
Length = 140
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 157 IPCPLFIFDPRYRLMVRRVLESETRKFGMV--ACERNGGGSEYGTILQVCDCIHMEDG 212
+ CP F +DP ++ ++L+ T ++ + GG S G L C+ +G
Sbjct: 78 VECPTFCYDPERSMLYSQILKLPTHLILVIDSVTQAGGGNSGGGLCLFCCEVASSSEG 135
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMD-YNIKCALC 106
+ C C + D + T C H +C C++ D KC C
Sbjct: 104 LTCPCCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKC 144
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMD-YNIKCALC 106
+ C C + D + T C H +C C++ D KC C
Sbjct: 352 LTCPCCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKC 392
>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALC 106
+ C +C ++ V PCGH C C + +M+ C +C
Sbjct: 144 LRCKVCMDEQINAVLIPCGHMVC--CEQCAMNLE-ACPVC 180
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 62 LKSSDINCVLCCSTLVDPVT-TPCGHTYCRTCVERSMDYNIKCALCLRP 109
L S C LC +P + CG+ +C C+ R + + C + P
Sbjct: 1194 LPSHPAQCPLCAKVRTNPTALSTCGYVFCYPCIYRYLGQHGCCPVTHLP 1242
>SB_1522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPC 84
+ NR G TR+L +AV+ A S +DI+ +CC+TL+ PC
Sbjct: 37 LPNRYGS--TRLLRKAVKNPKAPS----TDISERICCTTLLQGYPNPC 78
>SB_58016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPC 84
+ NR G TR+L +AV+ A S +DI+ +CC+TL+ PC
Sbjct: 36 LPNRYGS--TRLLRKAVKNPKAPS----TDISERICCTTLLQGYPNPC 77
>SB_48253| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
Length = 156
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 79 PVTTP-CGHTYCRTCVERSMDYNIKCALC 106
PV P CGH+ C TC +R N KC C
Sbjct: 40 PVVMPNCGHSCCSTCAKR---VNRKCPEC 65
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 67 INCVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLNDFDL 115
+ C C +P PC H +C C++++ C P D++L
Sbjct: 16 LTCSACKGFYKNPKRLPCLHAFCCHCLKKTQRGTKLCERMRCPTCDYEL 64
>SB_25458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTP 83
I NR G TR+L +AV+ A +S+DI+ +CC+TL+ TP
Sbjct: 37 IPNRYGS--TRLLRKAVKNPKA----QSTDISERICCTTLLQGYPTP 77
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/54 (24%), Positives = 20/54 (37%)
Query: 69 CVLCCSTLVDPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLNDFDLSTTGGTI 122
C +C PV T C +C C+ + C+ C L D+ G +
Sbjct: 332 CSICMGVPSTPVVTQCDQIFCSGCITAWLRNAGACSSCRSVLEVSDIDPLKGPL 385
>SB_5186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPC 84
+ NR G TR+L +AV+ A S +DI+ +CC+TL+ PC
Sbjct: 37 LPNRYGS--TRLLRKAVKNPKAPS----TDISERICCTTLLQGYPNPC 78
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 59 SSWLKSSDINCVLCCSTLV---DPVTTPCGHTYCRTCVERSMDYNIKCALCLRPLNDFDL 115
+S + + CV+C D PC H + + CV+ + N C LC+ + + D
Sbjct: 204 ASHVTEKNPKCVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLSNFTCPLCMLNIVERDN 263
Query: 116 S 116
S
Sbjct: 264 S 264
>SB_36807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPC 84
+ NR G TR+L +AV+ A S +DI+ +CC+TL+ PC
Sbjct: 10 LPNRYGS--TRLLRKAVKTPKAPS----TDISERICCTTLLQGYPNPC 51
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 66 DINCVLCCSTLVDPVTTP-CGHTYCRTCVE 94
+ C +C DP+ CGH +C++C++
Sbjct: 23 EYECPICQLAFRDPIQIEECGHRFCQSCLQ 52
>SB_8245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 37 IQNRNGRRLTRVLFRAVRKEAASSWLKSSDINCVLCCSTLVDPVTTP 83
+ NR+G TR+L +AV+ ASS +DI+ +CC+TL+ P
Sbjct: 10 LPNRHGS--TRLLRKAVKNPKASS----TDISERICCTTLLQGYPNP 50
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 79 PVTTPCGHTYCRTCV---ERSMDYNIKCALC 106
P+ CGHTYC +C+ R + C C
Sbjct: 405 PLLLECGHTYCDSCIIKLSRLQKTQVACPEC 435
>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
Length = 450
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 67 INCVLCCSTLVD----PVTTPCGHTYCRTCVER 95
+ C +C D P++ CGHT C+ C+ +
Sbjct: 12 LTCPICYHEFEDRQRGPISLACGHTICKACLSQ 44
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 51 RAVRKEAASSWLKSSDINCVLCCSTLVDPVTTPCGH 86
R K+ + +S D +C +C L+D V CGH
Sbjct: 267 RNCEKQKVENVSESLDESCKVCMDNLIDCVLLECGH 302
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.137 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,448,543
Number of Sequences: 59808
Number of extensions: 434302
Number of successful extensions: 3387
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 3256
Number of HSP's gapped (non-prelim): 164
length of query: 371
length of database: 16,821,457
effective HSP length: 83
effective length of query: 288
effective length of database: 11,857,393
effective search space: 3414929184
effective search space used: 3414929184
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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