Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000726-TA|BGIBMGA000726-PA|undefined
         (264 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    29   0.047
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.11 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.4  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   5.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   7.2  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   7.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 28.7 bits (61), Expect = 0.047
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 176 SENSTPKFDGGNVTSGTGSEQELSAPPICLRSVLESRRCGQV---VKQITNKVVRHARFN 232
           S  S+    GG   SG+G+ Q    P   + +VL  + C Q    +K+++N +V+++ + 
Sbjct: 515 SWRSSDDAKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVCDQAFSSLKELSNHMVKNSHYK 574

Query: 233 K 233
           +
Sbjct: 575 E 575


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 144 LPKPEKQPDLQDENFKMDTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGSEQELSAPP 202
           +P PE QP    E+      +Q   S T        TP  + GN + G  +++ +   P
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTP--ESGNESDGVCTKEGIVRDP 452


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 89  DDDEPSWDPPDMPPTHSYETPQQH---VVTSTIVSGQFEID-ESQAALAHHS 136
           DD EPS+D    P   +  TP Q+   +V    VS  F ID ESQ  L + S
Sbjct: 97  DDYEPSFDLFYYPSRQTLYTPVQYFKDLVAEAYVS-PFRIDNESQELLKYPS 147


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 88  FDDDEPSWDPPDMPPTHSYETPQQH 112
           F DD  S D P +   +  E PQQH
Sbjct: 211 FGDDGKSEDVPVISLKNENELPQQH 235


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 210 ESRRCGQVVKQITNKVVRHARFNKVLREQDL 240
           E  +C +  K+   KV+RH   NK    Q+L
Sbjct: 70  ECAKCNEKHKEGVRKVIRHLIKNKPSWWQEL 100


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 95  WDPPDMPPTHSYETPQ 110
           + P   PPT+ Y  PQ
Sbjct: 434 YQPSQAPPTYDYGIPQ 449


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 95  WDPPDMPPTHSYETPQ 110
           + P   PPT+ Y  PQ
Sbjct: 434 YQPSQAPPTYDYGIPQ 449


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 6/40 (15%)

Query: 202 PICLRSVLESRRCGQVVKQITNKVVRHARFNKVLREQDLW 241
           P  L+S  +  +C +  K++T KV+     NK    Q +W
Sbjct: 63  PDALKS--DCAKCSEKQKEMTKKVIHFLSHNK----QQMW 96


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 213 RCGQVVKQITNKVVRH 228
           +C Q  K+   KV+RH
Sbjct: 76  KCNQKQKETAEKVIRH 91


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 65  QEALNLEEDSSDSNMLNSFQINNFDDDEPSWD 96
           ++A + E+D  D    +S   +  DDDE + D
Sbjct: 176 EDANSDEQDDGDDGQGSSTNNDEDDDDEETGD 207


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 65  QEALNLEEDSSDSNMLNSFQINNFDDDEPSWD 96
           ++A + E+D  D    +S   +  DDDE + D
Sbjct: 176 EDANSDEQDDGDDGQGSSTNNDEDDDDEETGD 207


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 65  QEALNLEEDSSDSNMLNSFQINNFDDDEPSWD 96
           ++A + E+D  D    +S   +  DDDE + D
Sbjct: 176 EDANSDEQDDGDDGQGSSTNNDEDDDDEETGD 207


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 5  PSAVMDSAFGAYSRVGVDVHIQDERILPIHPDSP 38
          P A      G    +G    +Q +R+ P H  SP
Sbjct: 56 PYAAPAPGHGLQPTMGDYTQLQPQRLAPTHLQSP 89


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.130    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,004
Number of Sequences: 317
Number of extensions: 2908
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 13
length of query: 264
length of database: 114,650
effective HSP length: 56
effective length of query: 208
effective length of database: 96,898
effective search space: 20154784
effective search space used: 20154784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)