BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000726-TA|BGIBMGA000726-PA|undefined (264 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 31 0.73 SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 31 0.97 SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97 SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) 31 1.3 SB_8707| Best HMM Match : zf-AD (HMM E-Value=0.15) 31 1.3 SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_13308| Best HMM Match : MFS_1 (HMM E-Value=0.0008) 30 1.7 SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38) 30 1.7 SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 30 2.2 SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 30 2.2 SB_38972| Best HMM Match : PIP5K (HMM E-Value=0) 29 3.0 SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6) 29 3.0 SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33) 29 3.0 SB_44903| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9 SB_44450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9 SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45) 29 3.9 SB_25755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 28 6.8 SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5) 28 6.8 SB_25895| Best HMM Match : Transposase_5 (HMM E-Value=0.05) 28 6.8 SB_23672| Best HMM Match : PHD (HMM E-Value=0.00049) 28 6.8 SB_14989| Best HMM Match : UPF0181 (HMM E-Value=0.11) 28 6.8 SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_8536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_8533| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_47082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0 SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 28 9.0 SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 28 9.0 >SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) Length = 1531 Score = 31.5 bits (68), Expect = 0.73 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 144 LPKPEKQPD-LQDENFKMDTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGSEQELSAPP 202 LPKP+ + +Q + + S+HS + SSS +S+ G + S T S+ + Sbjct: 146 LPKPDSYNEKVQSPDRSSEGGSDSSHSQSDSSSSSSSSDGESGSDSDSSTTSKTTKTTSA 205 Query: 203 ICLRSV 208 +C++S+ Sbjct: 206 LCVQSL 211 >SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) Length = 521 Score = 31.1 bits (67), Expect = 0.97 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Query: 75 SDSNMLNSFQINNFDD-DEPSWDPPDMPPTHSYETPQQHVVTSTIVSGQFEIDESQAALA 133 SDS+ +S + DD DEP DP + P S + P Q + T + G Q A+ Sbjct: 83 SDSSSSSSSSEDEKDDKDEPDHDPGNDPDNVSDKLPDQALKTIGVEPGNKHEGSIQPAIE 142 Query: 134 HHSAMDHCGFLPKPEKQPDLQDE-NFKMDTDDQSAHSYTLDSSS 176 ++ G PE+ +L K D + + T+D + Sbjct: 143 GKKDIEFTGVSFTPEQVDELAAAITTKEDVTSITLRNATIDDEA 186 >SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 660 Score = 31.1 bits (67), Expect = 0.97 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 7/116 (6%) Query: 71 EEDSSDSNMLNSFQINNFDDDEPSWDPPDMPPTHS---YETPQQHVVTSTIVSGQ---FE 124 E D D N + F D +P DP M T S ETP+ T T + E Sbjct: 35 ERDFFDLNPSYPLKFERFGDADPKKDPEFMKHTQSTITTETPETQSTTDTPETQSTITTE 94 Query: 125 IDESQAALAHHSAMDHCGFLPKPEKQPDLQDENFKMDTDDQSAHSYTLDSSSENST 180 E+Q+ +++ P D +D DT D +SYT D+ + T Sbjct: 95 TPETQSTTDTRDPVNNRD-TRDPINNRDTRDPVNNTDTRDPVNNSYTRDTVNNTDT 149 >SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) Length = 1235 Score = 30.7 bits (66), Expect = 1.3 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 1/113 (0%) Query: 99 DMPPTHSYETPQQHVVTSTIVSGQFEIDESQAALAHHSAMDHCGFLPKPEKQPDLQDENF 158 D P + ET + VT D S L + D F L+ Sbjct: 404 DKPTSLQVETSKTTSVTEKQPKTAHPADSSLQHLLYPEPADTQSFHSPSAADVTLESVLI 463 Query: 159 KMDTDDQSAHSYTLDSSSEN-STPKFDGGNVTSGTGSEQELSAPPICLRSVLE 210 ++ T AH + LDS+ N P GN + T + + + PP ++L+ Sbjct: 464 EVGTPTSEAHGHPLDSTVSNVMYPTPGAGNTPTATEATRNNATPPTDKDTILQ 516 >SB_8707| Best HMM Match : zf-AD (HMM E-Value=0.15) Length = 605 Score = 30.7 bits (66), Expect = 1.3 Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 8/111 (7%) Query: 96 DPPDMPPTHSYETPQQHVVTSTIVSGQFEIDESQAALAHHSAMDHCGFL----PKPEKQP 151 D PD+ P H + + +SG++ +++ H + + C + P +++ Sbjct: 46 DSPDVHPIHVCSRCRSKANKAAYLSGEYPVEDCVVWKPHSDSCEVCSTVKHGRPAKKRKA 105 Query: 152 DLQDENFKMDTDDQSAHSYTLDS----SSENSTPKFDGGNVTSGTGSEQEL 198 D Q + + + D HS ++ EN +F GG G + + + Sbjct: 106 DCQKGDVEREGSDTGEHSDHIERVYCIEIENLEERFCGGQGGDGERTHENI 156 >SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 294 Score = 30.3 bits (65), Expect = 1.7 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 9/119 (7%) Query: 71 EEDSSDSNMLNSFQINNFDDDEPSWDPPDMPPTHS---YETPQQHVVTSTIVSGQ---FE 124 E D D N + F D +P DP M T S ETP+ T T + E Sbjct: 35 ERDFFDLNPSYPLKFERFGDADPKKDPEFMKHTQSTITTETPETQSTTDTPETQSTITTE 94 Query: 125 IDESQAALAHHSAMDHCGFLPKPEKQPDLQDENFKMDTDDQSAHSYTLD--SSSENSTP 181 E+Q+ +++ P D +D DT D +SYT D ++++N P Sbjct: 95 TPETQSTTDTRDPVNNRD-TRDPINNRDTRDPVNNTDTRDPVNNSYTRDTVNNTDNRDP 152 >SB_13308| Best HMM Match : MFS_1 (HMM E-Value=0.0008) Length = 700 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 91 DEPSWDPPDMPPTHSYETPQQHVVTSTIVSGQFEIDESQA 130 +EP DP MP S +T Q +VT +SG++E + SQA Sbjct: 131 EEPVTDPLGMPYEGSPQTGVQKLVTGQFLSGRYE-NNSQA 169 >SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38) Length = 622 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 61 SRTTQEALNLEEDSSDSNMLNSFQINNFDDDEPSWDPPDMPPTHSYETPQQHVVTSTIVS 120 S Q ++L +D+ + + N+ + E SW D+PP + YE P V + + Sbjct: 51 SHDDQGHISLTDDAKKNTWREHY--NHLLNVEFSWSHEDLPPAYPYEGPPILVTSEMVAR 108 Query: 121 GQFEIDESQAA 131 ++ + +AA Sbjct: 109 AVCKMKQGKAA 119 >SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) Length = 654 Score = 29.9 bits (64), Expect = 2.2 Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 217 VVKQITNKVVRHARFNKVLREQDLWCIDCKLMPVLPVTGKCGHTRCTK 264 +VK++T+ R+ + + + L C+ C + + P T CGHT C K Sbjct: 76 LVKRLTDFHARNKQSTLETKSRILSCVRCCGILLGPCTLPCGHTVCEK 123 >SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) Length = 535 Score = 29.9 bits (64), Expect = 2.2 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Query: 148 EKQPDLQDENFKMDTDDQSAHSYTLDSSSENSTPK-------FDGGNVTSGTGSEQELSA 200 E+QP ++D + HS L S ++ T + D NVTS + ++Q S Sbjct: 21 ERQPSIEDRQRGDHVKKKRKHSQDLQSHKDSKTEERKSAFASSDSWNVTSNSSNQQNSSP 80 Query: 201 PP 202 PP Sbjct: 81 PP 82 >SB_38972| Best HMM Match : PIP5K (HMM E-Value=0) Length = 426 Score = 29.5 bits (63), Expect = 3.0 Identities = 13/31 (41%), Positives = 19/31 (61%) Query: 4 IPSAVMDSAFGAYSRVGVDVHIQDERILPIH 34 +P +M F AYS+V VD H+ ++ LP H Sbjct: 60 VPVMLMPDDFKAYSKVRVDNHLFNKENLPSH 90 >SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6) Length = 163 Score = 29.5 bits (63), Expect = 3.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Query: 47 QSITLSLPFRLQLHSRTTQEALNLEEDSSDSNMLNSFQINNFDDDEPSWDPPD 99 ++ L +PF S TT N ++S++N N+ NN DDD+ D D Sbjct: 82 RTAALRVPFFYLQTSTTTTTTNNNNNNNSNNNNNNNNNNNNNDDDDDDDDDDD 134 >SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33) Length = 2822 Score = 29.5 bits (63), Expect = 3.0 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 25 IQDERILPIHPDSPIMPLALAHQSITLS----LPFRLQLHSRTTQEALNLEEDSSDSNML 80 +QD R++ I P + L + + +S LP SR ++NLE+ SN Sbjct: 2390 LQDNRLVDIPLSIPFLKLMCSGGNAIMSRFTILPSGSGSSSRLRHHSMNLEDSICSSNWR 2449 Query: 81 NSFQINNFDDDEPS 94 +S N + D PS Sbjct: 2450 SSIDDNTNELDRPS 2463 >SB_44903| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1281 Score = 29.5 bits (63), Expect = 3.0 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Query: 126 DESQAALAHHSAMDHCGFLPKPEKQPDLQDENFKMDTDDQSAHSYTLDSSSENSTPKFDG 185 D Q ++ H D + E++P QD N + T D + S T DS+ E T + Sbjct: 1078 DLEQESVTHER--DQVFVMQGTEQEPVTQDSNQEPVTQDLNQESVTQDSTQEPVTQDSNQ 1135 Query: 186 GNVTSGTGSE---QELSAPPICLRSVLES 211 +VT + E Q+ + P+ S ES Sbjct: 1136 ESVTQDSTQEPVTQDSTQEPVTQDSNQES 1164 >SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 806 Score = 29.1 bits (62), Expect = 3.9 Identities = 15/46 (32%), Positives = 24/46 (52%) Query: 152 DLQDENFKMDTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGSEQE 197 D D++ + D DD + S+S+N PK GN T+ G E++ Sbjct: 761 DDDDDDDEDDGDDDDKNKKKKASASKNLPPKAPEGNKTNAKGIEEK 806 >SB_44450| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 346 Score = 29.1 bits (62), Expect = 3.9 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Query: 69 NLEEDSSDSNMLNSFQINNFDDDEPSWDPPDMPPTH 104 N E D SD++ML+ D+DE + D P P H Sbjct: 132 NYESDDSDTSMLSDLN-GESDEDEVNRDAPTPPSPH 166 >SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45) Length = 709 Score = 29.1 bits (62), Expect = 3.9 Identities = 10/25 (40%), Positives = 19/25 (76%) Query: 200 APPICLRSVLESRRCGQVVKQITNK 224 AP C+ + ++S+R G++V+Q+ NK Sbjct: 255 APASCINTYVKSKRTGKMVRQVHNK 279 >SB_25755| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 310 Score = 28.7 bits (61), Expect = 5.2 Identities = 16/48 (33%), Positives = 23/48 (47%) Query: 152 DLQDENFKMDTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGSEQELS 199 +L D + + D DD++ + S ST K G + S SE ELS Sbjct: 12 ELMDSDSESDQDDKTNKMWATPVSRLKSTSKMSFGTLDSDYESEDELS 59 >SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1906 Score = 28.7 bits (61), Expect = 5.2 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 145 PKPEKQPDLQDENFKMDTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGSEQELSAPP 202 P P P L D+ +++ +++ TL+ SSE ST + D TS Q PP Sbjct: 247 PLPSSPPPL-DKELEINVKNRT----TLEKSSEKSTKQHDSTQTTSSKHQHQPSPPPP 299 >SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) Length = 885 Score = 28.3 bits (60), Expect = 6.8 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 169 SYTLDSSSENSTPKFDGGNVTS--GTGSEQELSAPPICLRSVL 209 S L S+ S+P+ + GNV S +EQELS P R L Sbjct: 538 SAILSQGSQGSSPRSEDGNVESEIALAAEQELSEPSYIERKPL 580 >SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5) Length = 398 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Query: 79 MLNSFQINNFDDDEPSW-DPPDMPPTHSYE 107 ++N F+++++ DE + PP +PP YE Sbjct: 342 LVNGFELSSYGSDEDDFTPPPPLPPGDGYE 371 >SB_25895| Best HMM Match : Transposase_5 (HMM E-Value=0.05) Length = 590 Score = 28.3 bits (60), Expect = 6.8 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 14 GAYSRVGVDVHIQDERILPIHPDSPIMPLALAHQSITLSLPFRLQLHSRTTQEALN 69 G + V VD ++D + I D+ ++ L+ A+Q + LP + +LH RT L+ Sbjct: 59 GGRNNVRVDDEMRD-CLNDIINDNCLLTLSRANQELRRRLPLKPRLHDRTVARTLD 113 >SB_23672| Best HMM Match : PHD (HMM E-Value=0.00049) Length = 370 Score = 28.3 bits (60), Expect = 6.8 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 56 RLQLHSRTTQEALNLEEDSS--DSNMLNSFQI--NNFDDDEPSWDPPDMPPTHSYETPQQ 111 R++L +T L+ED D+ +N+ + NN D DE + MP H+ TP Sbjct: 31 RVKLRIKTELHQFELKEDDEEDDTTGVNAGGLIRNNADVDEGMEEDSQMPLDHTDNTPVT 90 Query: 112 H 112 H Sbjct: 91 H 91 >SB_14989| Best HMM Match : UPF0181 (HMM E-Value=0.11) Length = 446 Score = 28.3 bits (60), Expect = 6.8 Identities = 13/38 (34%), Positives = 23/38 (60%) Query: 59 LHSRTTQEALNLEEDSSDSNMLNSFQINNFDDDEPSWD 96 L S+ T +ALNL ++ S+ ++F ++N+ D P D Sbjct: 119 LTSQATTQALNLASKATGSSQDHTFFVSNYCPDNPGPD 156 >SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2149 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Query: 79 MLNSFQINNFDDDEPSW-DPPDMPPTHSYE 107 ++N F+++++ DE + PP +PP YE Sbjct: 2093 LVNGFELSSYGSDEDDFTPPPPLPPGDGYE 2122 >SB_8536| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1029 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 161 DTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGS 194 + D ++ H++ + +E + FD GN T+G+ S Sbjct: 201 EIDSENGHTFKPPTLTETNQASFDSGNATTGSES 234 >SB_8533| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 335 Score = 28.3 bits (60), Expect = 6.8 Identities = 20/83 (24%), Positives = 35/83 (42%) Query: 42 LALAHQSITLSLPFRLQLHSRTTQEALNLEEDSSDSNMLNSFQINNFDDDEPSWDPPDMP 101 +A A QS +L + N E + S N ++ N+ D E +W P P Sbjct: 211 IAPATQSAETALSTQSTDQCTNRSVKFNTNESNRISATRNGWRDNSSMDVEQAWGQPRDP 270 Query: 102 PTHSYETPQQHVVTSTIVSGQFE 124 P S +P + + + +SG+ + Sbjct: 271 PKASCLSPLRRRLKAKQISGKLD 293 >SB_47082| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 908 Score = 27.9 bits (59), Expect = 9.0 Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 148 EKQPDLQDENFKMDTDDQSAHSYTLDSSSENSTPKFDGGNVTSGTGS 194 EK+ D + E K+ + Y+ S++ +STP N+ TGS Sbjct: 277 EKEADQEKELPKVPVGKTLTNGYSAHSNAFHSTPDLQNCNLVKNTGS 323 >SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) Length = 176 Score = 27.9 bits (59), Expect = 9.0 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 145 PKPEKQPDLQDENFKMDTDD--QSAHSYTLDSSSENSTPKFDGGNVTSGTGSEQE 197 P P+ +PD+Q++ D DD + D +++ D + G+GSE + Sbjct: 91 PHPKDEPDIQEQPENEDDDDGGEEDDGDDFDDDNDDGNGAEDDEDHEDGSGSESD 145 >SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) Length = 399 Score = 27.9 bits (59), Expect = 9.0 Identities = 21/73 (28%), Positives = 25/73 (34%) Query: 109 PQQHVVTSTIVSGQFEIDESQAALAHHSAMDHCGFLPKPEKQPDLQDENFKMDTDDQSAH 168 P Q VV + G + SQ HH A D PKP+ L N +A Sbjct: 322 PGQPVVCNQETEGVYRRTRSQLRPHHHFAPDESLNAPKPDVPTPLDIPNAATHAIGPTAT 381 Query: 169 SYTLDSSSENSTP 181 YT S P Sbjct: 382 GYTTRSGRPVRAP 394 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.315 0.130 0.392 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,894,383 Number of Sequences: 59808 Number of extensions: 423021 Number of successful extensions: 1328 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1300 Number of HSP's gapped (non-prelim): 39 length of query: 264 length of database: 16,821,457 effective HSP length: 81 effective length of query: 183 effective length of database: 11,977,009 effective search space: 2191792647 effective search space used: 2191792647 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 59 (27.9 bits)
- SilkBase 1999-2023 -