Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000725-TA|BGIBMGA000725-PA|IPR001140|ABC transporter,
transmembrane region, IPR003439|ABC transporter related, IPR011527|ABC
transporter, transmembrane region, type 1, IPR003593|AAA ATPase
(1149 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 63 9e-12
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 63 9e-12
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 25 2.2
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 24 6.9
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 63.3 bits (147), Expect = 9e-12
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 324 PGESVALVGSSGCGKSTILQLLQRLYDPNQGSVKLDGRNLKTLNIGWLRSSLGVVGQEPV 383
PGE +A++GSSG GK+T+L L N L N ++ L S V Q+
Sbjct: 103 PGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDD- 161
Query: 384 LFRGT--IYDNIAIGYPEATSEDVYRVAEMAYAHEFIKNLPNG--YETVIGERGA--SLS 437
LF GT + +++ D+ MA E I +L T IG G +S
Sbjct: 162 LFIGTLTVKEHLIFQALLRMDRDISYSQRMARVEEVISDLALSKCQNTPIGILGRIKGIS 221
Query: 438 GGQKQRIAIARSLLREPAVLLLDEATSALDPHSEKQVQAAL-DRASVGRTTLTVSHRLST 496
GG+K+R++ A +L P ++ DE TS LD V L + A G+T + H+ S+
Sbjct: 222 GGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQPSS 281
Query: 497 IVNC--HRIICMDQGTIIEQGTHVELMKAKGFYHKL 530
V +++ M +G G+ E A+ F+ +L
Sbjct: 282 EVYSMFDKLLLMSEGRTAFLGSPEE---AETFFREL 314
Score = 49.6 bits (113), Expect = 1e-07
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 923 ILKGIDLHVEAGKTVALVGSSGCGKSTVLQLIQRFYDPTTGNIELDGVDITKSLTLNR-- 980
ILK + G+ +A++GSSG GK+T+L + F+ T+ N+ + G+ + ++
Sbjct: 93 ILKNVFGVAYPGELLAILGSSGAGKTTLLNTLT-FH--TSSNLTVSGLRCVNGIPVSSKT 149
Query: 981 LRKQLGVVQQEPILFDR-TLAENIAYGDNSRKPTMDEXXXXXXXXXXHNFIVS---LPKG 1036
L Q VQQ+ + T+ E++ + R MD ++S L K
Sbjct: 150 LASQSAYVQQDDLFIGTLTVKEHLIFQALLR---MDRDISYSQRMARVEEVISDLALSKC 206
Query: 1037 YET--NXXXXXXXXXXXXKQRVCIARALIRSPRLLLLDEATSALDANSERAVTEAL-DHA 1093
T K+R+ A ++ +P+L+ DE TS LD+ V + L + A
Sbjct: 207 QNTPIGILGRIKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMA 266
Query: 1094 AKGRTCITIAHRLTTIKDADIICVLDKGKIVEKGNHAEL 1132
G+T I H+ +++ + DK ++ +G A L
Sbjct: 267 MTGKTVICTIHQ----PSSEVYSMFDKLLLMSEGRTAFL 301
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 63.3 bits (147), Expect = 9e-12
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 324 PGESVALVGSSGCGKSTILQLLQRLYDPNQGSVKLDGRNLKTLNIGWLRSSLGVVGQEPV 383
PGE +A++GSSG GK+T+L L N L N ++ L S V Q+
Sbjct: 103 PGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDD- 161
Query: 384 LFRGT--IYDNIAIGYPEATSEDVYRVAEMAYAHEFIKNLPNG--YETVIGERGA--SLS 437
LF GT + +++ D+ MA E I +L T IG G +S
Sbjct: 162 LFIGTLTVKEHLIFQALLRMDRDISYSQRMARVEEVISDLALSKCQNTPIGILGRIKGIS 221
Query: 438 GGQKQRIAIARSLLREPAVLLLDEATSALDPHSEKQVQAAL-DRASVGRTTLTVSHRLST 496
GG+K+R++ A +L P ++ DE TS LD V L + A G+T + H+ S+
Sbjct: 222 GGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQPSS 281
Query: 497 IVNC--HRIICMDQGTIIEQGTHVELMKAKGFYHKL 530
V +++ M +G G+ E A+ F+ +L
Sbjct: 282 EVYSMFDKLLLMSEGRTAFLGSPEE---AETFFREL 314
Score = 49.6 bits (113), Expect = 1e-07
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 923 ILKGIDLHVEAGKTVALVGSSGCGKSTVLQLIQRFYDPTTGNIELDGVDITKSLTLNR-- 980
ILK + G+ +A++GSSG GK+T+L + F+ T+ N+ + G+ + ++
Sbjct: 93 ILKNVFGVAYPGELLAILGSSGAGKTTLLNTLT-FH--TSSNLTVSGLRCVNGIPVSSKT 149
Query: 981 LRKQLGVVQQEPILFDR-TLAENIAYGDNSRKPTMDEXXXXXXXXXXHNFIVS---LPKG 1036
L Q VQQ+ + T+ E++ + R MD ++S L K
Sbjct: 150 LASQSAYVQQDDLFIGTLTVKEHLIFQALLR---MDRDISYSQRMARVEEVISDLALSKC 206
Query: 1037 YET--NXXXXXXXXXXXXKQRVCIARALIRSPRLLLLDEATSALDANSERAVTEAL-DHA 1093
T K+R+ A ++ +P+L+ DE TS LD+ V + L + A
Sbjct: 207 QNTPIGILGRIKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMA 266
Query: 1094 AKGRTCITIAHRLTTIKDADIICVLDKGKIVEKGNHAEL 1132
G+T I H+ +++ + DK ++ +G A L
Sbjct: 267 MTGKTVICTIHQ----PSSEVYSMFDKLLLMSEGRTAFL 301
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 58 TWFDTDSDFNLASKMSENLMKLKEGMGEKL 87
++FD D D NLAS +++ L + K+ + E L
Sbjct: 511 SFFDEDQDRNLASDLAKILSQAKQEIPEWL 540
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.8 bits (49), Expect = 6.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 307 PSRSDIKILKGFSLHIKP 324
P SD++ + G+++H KP
Sbjct: 1418 PHESDVEPIHGYTIHYKP 1435
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.319 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,415
Number of Sequences: 317
Number of extensions: 8688
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 8
length of query: 1149
length of database: 114,650
effective HSP length: 64
effective length of query: 1085
effective length of database: 94,362
effective search space: 102382770
effective search space used: 102382770
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)
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