Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000724-TA|BGIBMGA000724-PA|IPR003439|ABC transporter
related, IPR011527|ABC transporter, transmembrane region, type 1,
IPR005829|Sugar transporter superfamily, IPR003593|AAA ATPase,
IPR001140|ABC transporter, transmembrane region
(1258 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 72 3e-14
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 72 3e-14
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 27 1.1
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 24 5.7
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 24 5.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 9.9
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 9.9
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 71.7 bits (168), Expect = 3e-14
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 421 PGECVALVGSSGCGKSTVLQLLQRLYDPQAGSVXXXXXXXXXXXXSWLRSSLGVVGQEPV 480
PGE +A++GSSG GK+T+L L + +V S +S Q+
Sbjct: 103 PGELLAILGSSGAGKTTLLNTLT-FHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDD 161
Query: 481 LFRGT--IYDNIAIGSPEATREEIQRVAEIAYAHDFIS--LLPNGYDTVIGERGA--SLS 534
LF GT + +++ + +I +A + IS L +T IG G +S
Sbjct: 162 LFIGTLTVKEHLIFQALLRMDRDISYSQRMARVEEVISDLALSKCQNTPIGILGRIKGIS 221
Query: 535 GGQKQRIAIARSLLREPAVLLLDEATSALDPHSERQVQAAL-DRASVGRTTITVSHRLST 593
GG+K+R++ A +L P ++ DE TS LD V L + A G+T I H+ S+
Sbjct: 222 GGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQPSS 281
Query: 594 IVNA--DRIICMDQGVIVEQGTHEDLMKAKGFYHKLVTTGNENKEPAD 639
V + D+++ M +G G+ E+ A+ F+ +L N PAD
Sbjct: 282 EVYSMFDKLLLMSEGRTAFLGSPEE---AETFFRELEAPCPRNYNPAD 326
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 1079 QRVLKGIDLKMEAGKTIALVGSSGCGKSTIL 1109
+ +LK + G+ +A++GSSG GK+T+L
Sbjct: 91 KHILKNVFGVAYPGELLAILGSSGAGKTTLL 121
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 71.7 bits (168), Expect = 3e-14
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 421 PGECVALVGSSGCGKSTVLQLLQRLYDPQAGSVXXXXXXXXXXXXSWLRSSLGVVGQEPV 480
PGE +A++GSSG GK+T+L L + +V S +S Q+
Sbjct: 103 PGELLAILGSSGAGKTTLLNTLT-FHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDD 161
Query: 481 LFRGT--IYDNIAIGSPEATREEIQRVAEIAYAHDFIS--LLPNGYDTVIGERGA--SLS 534
LF GT + +++ + +I +A + IS L +T IG G +S
Sbjct: 162 LFIGTLTVKEHLIFQALLRMDRDISYSQRMARVEEVISDLALSKCQNTPIGILGRIKGIS 221
Query: 535 GGQKQRIAIARSLLREPAVLLLDEATSALDPHSERQVQAAL-DRASVGRTTITVSHRLST 593
GG+K+R++ A +L P ++ DE TS LD V L + A G+T I H+ S+
Sbjct: 222 GGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQPSS 281
Query: 594 IVNA--DRIICMDQGVIVEQGTHEDLMKAKGFYHKLVTTGNENKEPAD 639
V + D+++ M +G G+ E+ A+ F+ +L N PAD
Sbjct: 282 EVYSMFDKLLLMSEGRTAFLGSPEE---AETFFRELEAPCPRNYNPAD 326
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 1079 QRVLKGIDLKMEAGKTIALVGSSGCGKSTIL 1109
+ +LK + G+ +A++GSSG GK+T+L
Sbjct: 91 KHILKNVFGVAYPGELLAILGSSGAGKTTLL 121
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 26.6 bits (56), Expect = 1.1
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 627 LVTTGNENKEPADIEPLIEEADGDGDNIEPTVPSRLDVRRR--SSKKVLRHHSIKKDHPD 684
+++ GNEN P D + + + I S LD R+ SS ++ S K P
Sbjct: 25 VLSVGNENPPPEDTPLSFKNIESHLNAISQITNSTLDPGRKSPSSPRISSPSSTKSGSPG 84
Query: 685 WLT 687
+LT
Sbjct: 85 FLT 87
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 24.2 bits (50), Expect = 5.7
Identities = 18/83 (21%), Positives = 33/83 (39%)
Query: 945 LQKFQDALKTACVAVAYKTRWRGLVYGLGVYIPFMAYCSATVYGAVLVAYGEMEYKLVLL 1004
+++ A ++ V V YK + ++ L + +A + T+ YG Y L ++
Sbjct: 121 IEEVDVAFRSLAVWVPYKHLYVNILIHLSGLVTIVATLTVTIIFFASYQYGTKTYSLFIV 180
Query: 1005 VNEAIMYGAYMLGQSLVYAPSLN 1027
I+ L L Y LN
Sbjct: 181 FMTVILPYFINLLMELQYCHYLN 203
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 24.2 bits (50), Expect = 5.7
Identities = 18/83 (21%), Positives = 33/83 (39%)
Query: 945 LQKFQDALKTACVAVAYKTRWRGLVYGLGVYIPFMAYCSATVYGAVLVAYGEMEYKLVLL 1004
+++ A ++ V V YK + ++ L + +A + T+ YG Y L ++
Sbjct: 121 IEEVDVAFRSLAVWVPYKHLYVNILIHLSGLVTIVATLTVTIIFFASYQYGTKTYSLFIV 180
Query: 1005 VNEAIMYGAYMLGQSLVYAPSLN 1027
I+ L L Y LN
Sbjct: 181 FMTVILPYFINLLMELQYCHYLN 203
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.4 bits (48), Expect = 9.9
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 959 VAYKTRWRGLVYGLGVYIP---FMAYCSATVYGAVLVAYGEMEYK 1000
V Y T W GLG Y+P C+ VYG ++ + + K
Sbjct: 1401 VCYFTNWAWYRKGLGKYLPEDIDPDLCTHIVYGFAVLDFENLIVK 1445
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.4 bits (48), Expect = 9.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 155 SWYDTDSEFNLASKMSENLMSIKEGMGEKL 184
S++D D + NLAS +++ L K+ + E L
Sbjct: 511 SFFDEDQDRNLASDLAKILSQAKQEIPEWL 540
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.322 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,878
Number of Sequences: 317
Number of extensions: 10067
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 11
length of query: 1258
length of database: 114,650
effective HSP length: 65
effective length of query: 1193
effective length of database: 94,045
effective search space: 112195685
effective search space used: 112195685
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)
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