Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000724-TA|BGIBMGA000724-PA|IPR003439|ABC transporter
related, IPR011527|ABC transporter, transmembrane region, type 1,
IPR005829|Sugar transporter superfamily, IPR003593|AAA ATPase,
IPR001140|ABC transporter, transmembrane region
(1258 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 61 2e-10
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 61 2e-10
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 61 2e-10
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 27 3.1
AJ439060-5|CAD27756.1| 245|Anopheles gambiae putative deoxynucl... 27 4.1
AF488801-1|AAO49462.1| 246|Anopheles gambiae multisubstrate deo... 27 4.1
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 5.4
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 26 7.2
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 61.3 bits (142), Expect = 2e-10
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 13/243 (5%)
Query: 407 PEVKVLKGFSIHVKPGECVALVGSSGCGKSTVLQLLQRLYDP--QAGSVXXXXXXXXXXX 464
P +LK + K GE +A++GSSG GK+T+L L P +
Sbjct: 111 PRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVN 170
Query: 465 XSWLRSSLGVVGQEPVLFRG-TIYDNIAIGSPEATREEIQRVAEIAYAHDFISLLP--NG 521
LR+ V Q+ + T +++ + ++ + + + L
Sbjct: 171 AEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKC 230
Query: 522 YDTVIGERGA--SLSGGQKQRIAIARSLLREPAVLLLDEATSALDPHSERQV-QAALDRA 578
DT+IG G LSGG+++R+A A L +P +LL DE TS LD V Q A
Sbjct: 231 ADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMA 290
Query: 579 SVGRTTITVSHRLSTIVNA--DRIICMDQGVIVEQGTHEDLMKAKGFYHKLVTTGNENKE 636
G+T I H+ S+ + D+I+ + +G + G+ ++ F+ +L N
Sbjct: 291 MKGKTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSP---YQSAEFFSQLGIPCPPNYN 347
Query: 637 PAD 639
PAD
Sbjct: 348 PAD 350
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 1077 PSQRVLKGIDLKMEAGKTIALVGSSGCGKSTILQLFQRFYDPDSGFIELDNRDIRSALTI 1136
P + +LK + ++G+ +A++GSSG GK+T+L F P +++ +R+ +
Sbjct: 111 PRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNAL-AFRSPPG--VKISPNAVRALNGV 167
Query: 1137 P----RLRRQLGVVQQEPVLL 1153
P +LR + VQQ+ + +
Sbjct: 168 PVNAEQLRARCAYVQQDDLFI 188
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 61.3 bits (142), Expect = 2e-10
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 13/243 (5%)
Query: 407 PEVKVLKGFSIHVKPGECVALVGSSGCGKSTVLQLLQRLYDP--QAGSVXXXXXXXXXXX 464
P +LK + K GE +A++GSSG GK+T+L L P +
Sbjct: 111 PRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVN 170
Query: 465 XSWLRSSLGVVGQEPVLFRG-TIYDNIAIGSPEATREEIQRVAEIAYAHDFISLLP--NG 521
LR+ V Q+ + T +++ + ++ + + + L
Sbjct: 171 AEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKC 230
Query: 522 YDTVIGERGA--SLSGGQKQRIAIARSLLREPAVLLLDEATSALDPHSERQV-QAALDRA 578
DT+IG G LSGG+++R+A A L +P +LL DE TS LD V Q A
Sbjct: 231 ADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMA 290
Query: 579 SVGRTTITVSHRLSTIVNA--DRIICMDQGVIVEQGTHEDLMKAKGFYHKLVTTGNENKE 636
G+T I H+ S+ + D+I+ + +G + G+ ++ F+ +L N
Sbjct: 291 MKGKTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSP---YQSAEFFSQLGIPCPPNYN 347
Query: 637 PAD 639
PAD
Sbjct: 348 PAD 350
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 1077 PSQRVLKGIDLKMEAGKTIALVGSSGCGKSTILQLFQRFYDPDSGFIELDNRDIRSALTI 1136
P + +LK + ++G+ +A++GSSG GK+T+L F P +++ +R+ +
Sbjct: 111 PRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNAL-AFRSPPG--VKISPNAVRALNGV 167
Query: 1137 P----RLRRQLGVVQQEPVLL 1153
P +LR + VQQ+ + +
Sbjct: 168 PVNAEQLRARCAYVQQDDLFI 188
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 61.3 bits (142), Expect = 2e-10
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 13/243 (5%)
Query: 407 PEVKVLKGFSIHVKPGECVALVGSSGCGKSTVLQLLQRLYDP--QAGSVXXXXXXXXXXX 464
P +LK + K GE +A++GSSG GK+T+L L P +
Sbjct: 89 PRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVN 148
Query: 465 XSWLRSSLGVVGQEPVLFRG-TIYDNIAIGSPEATREEIQRVAEIAYAHDFISLLP--NG 521
LR+ V Q+ + T +++ + ++ + + + L
Sbjct: 149 AEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKC 208
Query: 522 YDTVIGERGA--SLSGGQKQRIAIARSLLREPAVLLLDEATSALDPHSERQV-QAALDRA 578
DT+IG G LSGG+++R+A A L +P +LL DE TS LD V Q A
Sbjct: 209 ADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMA 268
Query: 579 SVGRTTITVSHRLSTIVNA--DRIICMDQGVIVEQGTHEDLMKAKGFYHKLVTTGNENKE 636
G+T I H+ S+ + D+I+ + +G + G+ ++ F+ +L N
Sbjct: 269 MKGKTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSP---YQSAEFFSQLGIPCPPNYN 325
Query: 637 PAD 639
PAD
Sbjct: 326 PAD 328
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 1077 PSQRVLKGIDLKMEAGKTIALVGSSGCGKSTILQLFQRFYDPDSGFIELDNRDIRSALTI 1136
P + +LK + ++G+ +A++GSSG GK+T+L F P +++ +R+ +
Sbjct: 89 PRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNAL-AFRSPPG--VKISPNAVRALNGV 145
Query: 1137 P----RLRRQLGVVQQEPVLL 1153
P +LR + VQQ+ + +
Sbjct: 146 PVNAEQLRARCAYVQQDDLFI 166
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 70 HDRLSSYLPLTATFGGGKRLVN 91
H RLSS LPL++ GG +VN
Sbjct: 253 HARLSSSLPLSSVIGGPPGMVN 274
>AJ439060-5|CAD27756.1| 245|Anopheles gambiae putative
deoxynucleoside kinase protein.
Length = 245
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1094 TIALVGSSGCGKSTILQLFQRFYD 1117
T+ + G+ G GK+T L FQ+F D
Sbjct: 18 TVFVEGNIGSGKTTFLNHFQKFND 41
>AF488801-1|AAO49462.1| 246|Anopheles gambiae multisubstrate
deoxyribonucleoside kinaseprotein.
Length = 246
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1094 TIALVGSSGCGKSTILQLFQRFYD 1117
T+ + G+ G GK+T L FQ+F D
Sbjct: 18 TVFVEGNIGSGKTTFLNHFQKFND 41
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 26.2 bits (55), Expect = 5.4
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 531 ASLSGGQKQRIAIARSLLR---EPA-VLLLDEATSALDPHSERQVQAALDRASVGRTTIT 586
++LSGG+K A+A +PA +LDE +ALD + +V + + + TI
Sbjct: 1126 SNLSGGEKTIAALALLFAIHSFQPAPFFVLDEIDAALDNTNIGKVASYIREKTTNLQTIV 1185
Query: 587 VSHRLSTIVNADRII 601
+S + +AD +I
Sbjct: 1186 ISLKEEFYCHADVLI 1200
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 141 IRTLFLRSVLRQDMSWYDTD--SEFNLASKMSE-NLMSIKEG 179
+RT F + +L ++SW +TD +E N+ + +E N SI G
Sbjct: 290 VRTNFQKKLLMVELSWMNTDAQTEINMFLRATEMNPSSINLG 331
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.322 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,147,885
Number of Sequences: 2123
Number of extensions: 44953
Number of successful extensions: 81
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 68
Number of HSP's gapped (non-prelim): 15
length of query: 1258
length of database: 516,269
effective HSP length: 72
effective length of query: 1186
effective length of database: 363,413
effective search space: 431007818
effective search space used: 431007818
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)
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