Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000723-TA|BGIBMGA000723-PA|IPR002109|Glutaredoxin,
IPR012336|Thioredoxin-like fold, IPR010987|Glutathione S-transferase,
C-terminal-like, IPR011767|Glutaredoxin active site
         (313 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 73  KKVPIVLAKVDGGYQQLLDSTAIISILETYLLDKKSQLT 111
           +K P++LA    GY++++D    +  L T +LD  S +T
Sbjct: 796 QKPPLILAAAISGYKEVIDVAYDLPALGT-VLDFMSVMT 833



 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 217 WMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADI 266
           W+  + +K   + ++ ++   +  A  WTI ++    R  GG  P L  +
Sbjct: 938 WVGFEDIKSVRDKAEYIKTKGFGGAVAWTIDLDDFSNRCCGGSFPLLRSL 987


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)

Query: 266 ITVYGVLSSIEGCMAFKDL 284
           +T+YG+LS ++   + KD+
Sbjct: 301 LTIYGLLSQLQAGFSTKDI 319


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)

Query: 22  SDTSNLSLVLFQYRTCPFCCK 42
           S T NL LVL  Y    F CK
Sbjct: 206 SGTENLDLVLPIYSQLVFMCK 226


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.134    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,343
Number of Sequences: 317
Number of extensions: 3062
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 313
length of database: 114,650
effective HSP length: 57
effective length of query: 256
effective length of database: 96,581
effective search space: 24724736
effective search space used: 24724736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)