Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000723-TA|BGIBMGA000723-PA|IPR002109|Glutaredoxin,
IPR012336|Thioredoxin-like fold, IPR010987|Glutathione S-transferase,
C-terminal-like, IPR011767|Glutaredoxin active site
(313 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223520-1|BAD97240.1| 377|Homo sapiens prostaglandin E synthas... 276 6e-74
BC011613-1|AAH11613.1| 377|Homo sapiens prostaglandin E synthas... 276 8e-74
BC009456-1|AAH09456.1| 376|Homo sapiens Unknown (protein for IM... 276 8e-74
BC009397-1|AAH09397.2| 370|Homo sapiens PTGES2 protein protein. 276 8e-74
AL590708-1|CAI13821.1| 377|Homo sapiens prostaglandin E synthas... 276 8e-74
AK024100-1|BAB14826.1| 377|Homo sapiens protein ( Homo sapiens ... 276 8e-74
AL590708-2|CAI13822.1| 265|Homo sapiens prostaglandin E synthas... 162 2e-39
U90313-1|AAB70109.1| 241|Homo sapiens glutathione-S-transferase... 38 0.060
BX537431-1|CAD97673.1| 290|Homo sapiens hypothetical protein pr... 38 0.060
BC000127-1|AAH00127.1| 241|Homo sapiens glutathione S-transfera... 38 0.060
AY817669-1|AAV68046.1| 241|Homo sapiens glutathione S-transfera... 38 0.060
AL139341-5|CAI17224.1| 241|Homo sapiens glutathione S-transfera... 38 0.060
AF212303-1|AAF73376.1| 241|Homo sapiens glutathione transferase... 38 0.060
AL139341-7|CAI17226.1| 180|Homo sapiens glutathione S-transfera... 35 0.42
AL139341-6|CAI17225.1| 200|Homo sapiens glutathione S-transfera... 35 0.42
X51473-1|CAA35837.1| 212|Homo sapiens fibrinogen gamma chain (p... 31 6.9
BT007081-1|AAP35744.1| 437|Homo sapiens fibrinogen, gamma polyp... 31 6.9
BC021674-1|AAH21674.1| 437|Homo sapiens fibrinogen gamma chain ... 31 6.9
BC007044-1|AAH07044.1| 437|Homo sapiens fibrinogen gamma chain ... 31 6.9
AF350254-2|AAK19752.2| 453|Homo sapiens fibrinogen gamma chain,... 31 6.9
AF350254-1|AAK19751.2| 437|Homo sapiens fibrinogen gamma chain,... 31 6.9
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 30 9.1
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 30 9.1
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 30 9.1
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 30 9.1
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 30 9.1
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 30 9.1
>AK223520-1|BAD97240.1| 377|Homo sapiens prostaglandin E synthase 2
isoform 1 variant protein.
Length = 377
Score = 276 bits (677), Expect = 6e-74
Identities = 142/280 (50%), Positives = 187/280 (66%), Gaps = 8/280 (2%)
Query: 24 TSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVD 83
+S L L L+QY+TCPFC KVRA+LD + Y+VVEV+ V R IK+S Y+KVPI++A+
Sbjct: 97 SSRLQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEG 156
Query: 84 GGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNS 143
QQL DS+ IIS L+TYL+ + L EII +YP + VN+ GK +TE NKY++M N
Sbjct: 157 ESSQQLNDSSVIISALKTYLVSGQ-PLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNE 215
Query: 144 PLSND--NEKSAELEERKWRQWADTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFP 201
+ K A EE KWRQWAD LVH +SPNVYRTP EAL +F + + G+ F
Sbjct: 216 KEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGK----FG 271
Query: 202 GWECALMVYVGAAAMWMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAP 261
E A+ Y+GAAAM++I+KRLK RH + D+VR+ LY+AA++W AV+ K + F GG P
Sbjct: 272 AVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVS-KDRPFMGGQKP 330
Query: 262 NLADITVYGVLSSIEGCMAFKDLRNNTQIAKWYDDVKNAI 301
NLAD+ VYGVL +EG AF DL +T I WY V+ AI
Sbjct: 331 NLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAI 370
>BC011613-1|AAH11613.1| 377|Homo sapiens prostaglandin E synthase 2
protein.
Length = 377
Score = 276 bits (676), Expect = 8e-74
Identities = 142/280 (50%), Positives = 186/280 (66%), Gaps = 8/280 (2%)
Query: 24 TSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVD 83
+S L L L+QY+TCPFC KVRA+LD + Y+VVEV+ V R IK+S Y+KVPI++A+
Sbjct: 97 SSRLQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEG 156
Query: 84 GGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNS 143
QQL DS+ IIS L+TYL+ + L EII +YP + VN+ GK +TE NKY++M N
Sbjct: 157 ESSQQLNDSSVIISALKTYLVSGQ-PLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNE 215
Query: 144 PLSND--NEKSAELEERKWRQWADTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFP 201
+ K A EE KWRQWAD LVH +SPNVYRTP EAL +F + + G+ F
Sbjct: 216 KEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGK----FG 271
Query: 202 GWECALMVYVGAAAMWMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAP 261
E A+ Y+GAAAM++I+KRLK RH + D+VR+ LY+AA++W AV K + F GG P
Sbjct: 272 AVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVG-KDRPFMGGQKP 330
Query: 262 NLADITVYGVLSSIEGCMAFKDLRNNTQIAKWYDDVKNAI 301
NLAD+ VYGVL +EG AF DL +T I WY V+ AI
Sbjct: 331 NLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAI 370
>BC009456-1|AAH09456.1| 376|Homo sapiens Unknown (protein for
IMAGE:3536456) protein.
Length = 376
Score = 276 bits (676), Expect = 8e-74
Identities = 142/280 (50%), Positives = 186/280 (66%), Gaps = 8/280 (2%)
Query: 24 TSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVD 83
+S L L L+QY+TCPFC KVRA+LD + Y+VVEV+ V R IK+S Y+KVPI++A+
Sbjct: 96 SSRLQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEG 155
Query: 84 GGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNS 143
QQL DS+ IIS L+TYL+ + L EII +YP + VN+ GK +TE NKY++M N
Sbjct: 156 ESSQQLNDSSVIISALKTYLVSGQ-PLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNE 214
Query: 144 PLSND--NEKSAELEERKWRQWADTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFP 201
+ K A EE KWRQWAD LVH +SPNVYRTP EAL +F + + G+ F
Sbjct: 215 KEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGK----FG 270
Query: 202 GWECALMVYVGAAAMWMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAP 261
E A+ Y+GAAAM++I+KRLK RH + D+VR+ LY+AA++W AV K + F GG P
Sbjct: 271 AVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVG-KDRPFMGGQKP 329
Query: 262 NLADITVYGVLSSIEGCMAFKDLRNNTQIAKWYDDVKNAI 301
NLAD+ VYGVL +EG AF DL +T I WY V+ AI
Sbjct: 330 NLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAI 369
>BC009397-1|AAH09397.2| 370|Homo sapiens PTGES2 protein protein.
Length = 370
Score = 276 bits (676), Expect = 8e-74
Identities = 142/280 (50%), Positives = 186/280 (66%), Gaps = 8/280 (2%)
Query: 24 TSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVD 83
+S L L L+QY+TCPFC KVRA+LD + Y+VVEV+ V R IK+S Y+KVPI++A+
Sbjct: 90 SSRLQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEG 149
Query: 84 GGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNS 143
QQL DS+ IIS L+TYL+ + L EII +YP + VN+ GK +TE NKY++M N
Sbjct: 150 ESSQQLNDSSVIISALKTYLVSGQ-PLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNE 208
Query: 144 PLSND--NEKSAELEERKWRQWADTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFP 201
+ K A EE KWRQWAD LVH +SPNVYRTP EAL +F + + G+ F
Sbjct: 209 KEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGK----FG 264
Query: 202 GWECALMVYVGAAAMWMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAP 261
E A+ Y+GAAAM++I+KRLK RH + D+VR+ LY+AA++W AV K + F GG P
Sbjct: 265 AVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVG-KDRPFMGGQKP 323
Query: 262 NLADITVYGVLSSIEGCMAFKDLRNNTQIAKWYDDVKNAI 301
NLAD+ VYGVL +EG AF DL +T I WY V+ AI
Sbjct: 324 NLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAI 363
>AL590708-1|CAI13821.1| 377|Homo sapiens prostaglandin E synthase 2
protein.
Length = 377
Score = 276 bits (676), Expect = 8e-74
Identities = 142/280 (50%), Positives = 186/280 (66%), Gaps = 8/280 (2%)
Query: 24 TSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVD 83
+S L L L+QY+TCPFC KVRA+LD + Y+VVEV+ V R IK+S Y+KVPI++A+
Sbjct: 97 SSRLQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEG 156
Query: 84 GGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNS 143
QQL DS+ IIS L+TYL+ + L EII +YP + VN+ GK +TE NKY++M N
Sbjct: 157 ESSQQLNDSSVIISALKTYLVSGQ-PLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNE 215
Query: 144 PLSND--NEKSAELEERKWRQWADTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFP 201
+ K A EE KWRQWAD LVH +SPNVYRTP EAL +F + + G+ F
Sbjct: 216 KEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGK----FG 271
Query: 202 GWECALMVYVGAAAMWMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAP 261
E A+ Y+GAAAM++I+KRLK RH + D+VR+ LY+AA++W AV K + F GG P
Sbjct: 272 AVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVG-KDRPFMGGQKP 330
Query: 262 NLADITVYGVLSSIEGCMAFKDLRNNTQIAKWYDDVKNAI 301
NLAD+ VYGVL +EG AF DL +T I WY V+ AI
Sbjct: 331 NLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAI 370
>AK024100-1|BAB14826.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ14038 fis, clone HEMBA1005206. ).
Length = 377
Score = 276 bits (676), Expect = 8e-74
Identities = 142/280 (50%), Positives = 186/280 (66%), Gaps = 8/280 (2%)
Query: 24 TSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVD 83
+S L L L+QY+TCPFC KVRA+LD + Y+VVEV+ V R IK+S Y+KVPI++A+
Sbjct: 97 SSRLQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEG 156
Query: 84 GGYQQLLDSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNS 143
QQL DS+ IIS L+TYL+ + L EII +YP + VN+ GK +TE NKY++M N
Sbjct: 157 ESSQQLNDSSVIISALKTYLVSGQ-PLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNE 215
Query: 144 PLSND--NEKSAELEERKWRQWADTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFP 201
+ K A EE KWRQWAD LVH +SPNVYRTP EAL +F + + G+ F
Sbjct: 216 KEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGK----FG 271
Query: 202 GWECALMVYVGAAAMWMIAKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAP 261
E A+ Y+GAAAM++I+KRLK RH + D+VR+ LY+AA++W AV K + F GG P
Sbjct: 272 AVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVG-KDRPFMGGQKP 330
Query: 262 NLADITVYGVLSSIEGCMAFKDLRNNTQIAKWYDDVKNAI 301
NLAD+ VYGVL +EG AF DL +T I WY V+ AI
Sbjct: 331 NLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAI 370
>AL590708-2|CAI13822.1| 265|Homo sapiens prostaglandin E synthase 2
protein.
Length = 265
Score = 162 bits (393), Expect = 2e-39
Identities = 89/185 (48%), Positives = 119/185 (64%), Gaps = 7/185 (3%)
Query: 47 LDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVDGGYQQLLDSTAIISILETYLLDK 106
L A + +VVEV+ V R IK+S Y+KVPI++A+ QQL DS+ IIS L+TYL+
Sbjct: 85 LHAERSAAQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSG 144
Query: 107 KSQLTEIIKFYPVSQFVNDAGKNITEITNKYFIMHNSPLSND--NEKSAELEERKWRQWA 164
+ L EII +YP + VN+ GK +TE NKY++M N + K A EE KWRQWA
Sbjct: 145 QP-LEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNEKEAQQVYGGKEARTEEMKWRQWA 203
Query: 165 DTVLVHTLSPNVYRTPGEALETFKWFEQAGRWKESFPGWECALMVYVGAAAMWMIAKRLK 224
D LVH +SPNVYRTP EAL +F + + G+ F E A+ Y+GAAAM++I+KRLK
Sbjct: 204 DDWLVHLISPNVYRTPTEALASFDYIVREGK----FGAVEGAVAKYMGAAAMYLISKRLK 259
Query: 225 KRHNI 229
RH +
Sbjct: 260 SRHRL 264
>U90313-1|AAB70109.1| 241|Homo sapiens glutathione-S-transferase
homolog protein.
Length = 241
Score = 37.5 bits (83), Expect = 0.060
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 28 SLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGY 86
S+ ++ R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V +
Sbjct: 23 SIRIYSMRFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQ 79
Query: 87 QQLLDSTAI 95
QL+ +AI
Sbjct: 80 GQLIYESAI 88
>BX537431-1|CAD97673.1| 290|Homo sapiens hypothetical protein
protein.
Length = 290
Score = 37.5 bits (83), Expect = 0.060
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 28 SLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGY 86
S+ ++ R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V +
Sbjct: 72 SIRIYSMRFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQ 128
Query: 87 QQLLDSTAI 95
QL+ +AI
Sbjct: 129 GQLIYESAI 137
>BC000127-1|AAH00127.1| 241|Homo sapiens glutathione
S-transferase omega 1 protein.
Length = 241
Score = 37.5 bits (83), Expect = 0.060
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 28 SLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGY 86
S+ ++ R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V +
Sbjct: 23 SIRIYSMRFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQ 79
Query: 87 QQLLDSTAI 95
QL+ +AI
Sbjct: 80 GQLIYESAI 88
>AY817669-1|AAV68046.1| 241|Homo sapiens glutathione
S-transferase omega 1-1 protein.
Length = 241
Score = 37.5 bits (83), Expect = 0.060
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 28 SLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGY 86
S+ ++ R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V +
Sbjct: 23 SIRIYSMRFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQ 79
Query: 87 QQLLDSTAI 95
QL+ +AI
Sbjct: 80 GQLIYESAI 88
>AL139341-5|CAI17224.1| 241|Homo sapiens glutathione
S-transferase omega 1 protein.
Length = 241
Score = 37.5 bits (83), Expect = 0.060
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 28 SLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGY 86
S+ ++ R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V +
Sbjct: 23 SIRIYSMRFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQ 79
Query: 87 QQLLDSTAI 95
QL+ +AI
Sbjct: 80 GQLIYESAI 88
>AF212303-1|AAF73376.1| 241|Homo sapiens glutathione transferase
omega protein.
Length = 241
Score = 37.5 bits (83), Expect = 0.060
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 28 SLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGY 86
S+ ++ R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V +
Sbjct: 23 SIRIYSMRFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQ 79
Query: 87 QQLLDSTAI 95
QL+ +AI
Sbjct: 80 GQLIYESAI 88
>AL139341-7|CAI17226.1| 180|Homo sapiens glutathione
S-transferase omega 1 protein.
Length = 180
Score = 34.7 bits (76), Expect = 0.42
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 35 RTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGYQQLLDST 93
R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V + QL+ +
Sbjct: 2 RFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQGQLIYES 58
Query: 94 AI 95
AI
Sbjct: 59 AI 60
>AL139341-6|CAI17225.1| 200|Homo sapiens glutathione
S-transferase omega 1 protein.
Length = 200
Score = 34.7 bits (76), Expect = 0.42
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 35 RTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKV-DGGYQQLLDST 93
R CPF + R L A+GI +EV+ ++ L+ +W +KK P L V + QL+ +
Sbjct: 2 RFCPFAERTRLVLKAKGIRHEVININ--LKNKPEWF-FKKNPFGLVPVLENSQGQLIYES 58
Query: 94 AI 95
AI
Sbjct: 59 AI 60
>X51473-1|CAA35837.1| 212|Homo sapiens fibrinogen gamma chain
(partial) (212 AA) protein.
Length = 212
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 DSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAG-KNITEITNKYFIMHNSPLSNDN 149
D ++ ++++ L + L EI+K Y S +D+ + + EI N +N + N
Sbjct: 23 DESSKPNMIDAATLKSRKMLEEIMK-YEASILTHDSSIRYLQEIYNS----NNQKIVNLK 77
Query: 150 EKSAELEERKWRQWADTVLVHTLS 173
EK A+LE + DTV +H ++
Sbjct: 78 EKVAQLEAQCQEPCKDTVQIHDIT 101
>BT007081-1|AAP35744.1| 437|Homo sapiens fibrinogen, gamma
polypeptide protein.
Length = 437
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 DSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAG-KNITEITNKYFIMHNSPLSNDN 149
D ++ ++++ L + L EI+K Y S +D+ + + EI N +N + N
Sbjct: 97 DESSKPNMIDAATLKSRKMLEEIMK-YEASILTHDSSIRYLQEIYNS----NNQKIVNLK 151
Query: 150 EKSAELEERKWRQWADTVLVHTLS 173
EK A+LE + DTV +H ++
Sbjct: 152 EKVAQLEAQCQEPCKDTVQIHDIT 175
>BC021674-1|AAH21674.1| 437|Homo sapiens fibrinogen gamma chain
protein.
Length = 437
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 DSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAG-KNITEITNKYFIMHNSPLSNDN 149
D ++ ++++ L + L EI+K Y S +D+ + + EI N +N + N
Sbjct: 97 DESSKPNMIDAATLKSRKMLEEIMK-YEASILTHDSSIRYLQEIYNS----NNQKIVNLK 151
Query: 150 EKSAELEERKWRQWADTVLVHTLS 173
EK A+LE + DTV +H ++
Sbjct: 152 EKVAQLEAQCQEPCKDTVQIHDIT 175
>BC007044-1|AAH07044.1| 437|Homo sapiens fibrinogen gamma chain
protein.
Length = 437
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 DSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAG-KNITEITNKYFIMHNSPLSNDN 149
D ++ ++++ L + L EI+K Y S +D+ + + EI N +N + N
Sbjct: 97 DESSKPNMIDAATLKSRKMLEEIMK-YEASILTHDSSIRYLQEIYNS----NNQKIVNLK 151
Query: 150 EKSAELEERKWRQWADTVLVHTLS 173
EK A+LE + DTV +H ++
Sbjct: 152 EKVAQLEAQCQEPCKDTVQIHDIT 175
>AF350254-2|AAK19752.2| 453|Homo sapiens fibrinogen gamma chain,
isoform gamma-B precursor protein.
Length = 453
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 DSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAG-KNITEITNKYFIMHNSPLSNDN 149
D ++ ++++ L + L EI+K Y S +D+ + + EI N +N + N
Sbjct: 97 DESSKPNMIDAATLKSRKMLEEIMK-YEASILTHDSSIRYLQEIYNS----NNQKIVNLK 151
Query: 150 EKSAELEERKWRQWADTVLVHTLS 173
EK A+LE + DTV +H ++
Sbjct: 152 EKVAQLEAQCQEPCKDTVQIHDIT 175
>AF350254-1|AAK19751.2| 437|Homo sapiens fibrinogen gamma chain,
isoform gamma-A precursor protein.
Length = 437
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 DSTAIISILETYLLDKKSQLTEIIKFYPVSQFVNDAG-KNITEITNKYFIMHNSPLSNDN 149
D ++ ++++ L + L EI+K Y S +D+ + + EI N +N + N
Sbjct: 97 DESSKPNMIDAATLKSRKMLEEIMK-YEASILTHDSSIRYLQEIYNS----NNQKIVNLK 151
Query: 150 EKSAELEERKWRQWADTVLVHTLS 173
EK A+LE + DTV +H ++
Sbjct: 152 EKVAQLEAQCQEPCKDTVQIHDIT 175
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 220 AKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADITVYGVLSSIEGCM 279
A R +R +I D + + + +AVN KG + GG AP++A +T S I GC+
Sbjct: 4300 ALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSIYIGG-APDVATLTGGRFSSGITGCV 4358
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 220 AKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADITVYGVLSSIEGCM 279
A R +R +I D + + + +AVN KG + GG AP++A +T S I GC+
Sbjct: 4298 ALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGG-APDVATLTGGRFSSGITGCV 4356
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 (perlecan) protein.
Length = 4391
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 220 AKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADITVYGVLSSIEGCM 279
A R +R +I D + + + +AVN KG + GG AP++A +T S I GC+
Sbjct: 4298 ALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGG-APDVATLTGGRFSSGITGCV 4356
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 (perlecan) protein.
Length = 4391
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 220 AKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADITVYGVLSSIEGCM 279
A R +R +I D + + + +AVN KG + GG AP++A +T S I GC+
Sbjct: 4298 ALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGG-APDVATLTGGRFSSGITGCV 4356
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 220 AKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADITVYGVLSSIEGCM 279
A R +R +I D + + + +AVN KG + GG AP++A +T S I GC+
Sbjct: 4277 ALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGG-APDVATLTGGRFSSGITGCV 4335
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 220 AKRLKKRHNISDDVRQSLYDAANEWTIAVNKKGKRFFGGDAPNLADITVYGVLSSIEGCM 279
A R +R +I D + + + +AVN KG + GG AP++A +T S I GC+
Sbjct: 2238 ALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGNVYIGG-APDVATLTGGRFSSGITGCV 2296
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.134 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,404,328
Number of Sequences: 224733
Number of extensions: 1712919
Number of successful extensions: 3085
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3045
Number of HSP's gapped (non-prelim): 27
length of query: 313
length of database: 73,234,838
effective HSP length: 90
effective length of query: 223
effective length of database: 53,008,868
effective search space: 11820977564
effective search space used: 11820977564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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