Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000722-TA|BGIBMGA000722-PA|IPR002994|Surfeit locus 1
(257 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_54034| Best HMM Match : Tctex-1 (HMM E-Value=7.5) 29 5.0
SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12) 29 5.0
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 28 6.6
SB_6004| Best HMM Match : zf-B_box (HMM E-Value=4.5) 28 8.7
SB_37228| Best HMM Match : DUF1048 (HMM E-Value=1.4) 28 8.7
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 33.5 bits (73), Expect = 0.17
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 14/114 (12%)
Query: 136 GWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDLDQMSAHI 195
GW+ +N+ P S ++ E+T +T + F NPE G + +A
Sbjct: 79 GWV-ENVTPSGFT--SCVETSAEITSTRAVTLQWMAFA--GNPENGLAGTAVVPLFTAGT 133
Query: 196 GCLPI------WLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYSLFAFTS 243
C+ + WL KGIP +GW +P T VTL N T YS T+
Sbjct: 134 ECVDVDFIGVDWLALKGIP---SGWAVPIGTSVTLPNTEDLTASTSYSFCKVTT 184
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 204 AKGIPDPPTGWPIPNQTRVTLRNEHFSYIVT 234
A G PDP W NQ TL +++ S+I+T
Sbjct: 372 ATGFPDPNYTWYRNNQVLTTLTSDNGSFIIT 402
>SB_54034| Best HMM Match : Tctex-1 (HMM E-Value=7.5)
Length = 255
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 207 IPDPPTGWPIPNQTRVTLRN-------EHFSYIVT 234
+ + PTGW IP ++ VTL N EH+SY T
Sbjct: 180 LEEVPTGWDIPYESVVTLPNLSPPKSTEHYSYCQT 214
>SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12)
Length = 697
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 17 KWILLMIPVTSFTLGSWQVYRWQWK 41
KW L P+T F W + WQW+
Sbjct: 576 KW--LYFPITPFAANGWVWFGWQWR 598
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 207 IPDPPTGWPIPNQTRVTLRN-------EHFSYIVT 234
+ + PTGW IP ++ VTL N EH+SY T
Sbjct: 64 LEEVPTGWDIPYESVVTLPNLSPPKSTEHYSYCQT 98
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 7/32 (21%)
Query: 207 IPDPPTGWPIPNQTRVTLRN-------EHFSY 231
+ + PTGW IP ++ VTL N EH+SY
Sbjct: 602 LEEVPTGWDIPYESVVTLPNLSPPKSTEHYSY 633
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 12 PTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEKMEY 71
P ++ +L++ + ++ +GSW+ + KLGL + N P+D + EY
Sbjct: 953 PWDVSDDSMLLVGIYNYGMGSWEAIKADTKLGLSTKILPPGNL----KPQDKHLQTRAEY 1008
Query: 72 LPVKVKGEFLHE 83
L +K+ + +H+
Sbjct: 1009 L-IKLLKQVVHD 1019
>SB_6004| Best HMM Match : zf-B_box (HMM E-Value=4.5)
Length = 279
Score = 27.9 bits (59), Expect = 8.7
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 59 MPKDFSELEKMEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLV 118
+P + L K YLP K E L +I G L ++S R+ + D ++ + W
Sbjct: 118 LPLITARLRKNPYLPRK---EELKISDI--GVSRLSMKASWIKRLRT--QDEREEESWKR 170
Query: 119 ITPFKLADTGEVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPF 172
I F L GE IL + + + L P + PS + + + + L EK + F
Sbjct: 171 IPIFLLQSVGETILFDCDFDVKTL-PLNPKLPSFYRDVLRIWQELELYEKASVF 223
>SB_37228| Best HMM Match : DUF1048 (HMM E-Value=1.4)
Length = 964
Score = 27.9 bits (59), Expect = 8.7
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 89 GPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTGEVILINRGWIHQNLRPKEKR 148
G L EE + + + L++D + G+ ++L TG ++ +R NL KR
Sbjct: 268 GDHRLAEEGPVPSPI-DLMADQAERLGYRCHRVYRLTPTGLMVCEDR-----NL----KR 317
Query: 149 EPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDLDQMSAHIGCLPIWLDAKGIP 208
S V + + RA + K + + +D +++ + LP W K +
Sbjct: 318 LVSATNDIVNTNSMFYSVKWRA--LDKQVANALTGYRKDWRELANRVKKLPEWNRFKWLS 375
Query: 209 DPPTGWPIPNQTRVT 223
WP+P TR++
Sbjct: 376 MKSGKWPVPEPTRIS 390
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.139 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,237,587
Number of Sequences: 59808
Number of extensions: 398015
Number of successful extensions: 618
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 615
Number of HSP's gapped (non-prelim): 9
length of query: 257
length of database: 16,821,457
effective HSP length: 81
effective length of query: 176
effective length of database: 11,977,009
effective search space: 2107953584
effective search space used: 2107953584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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