GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000722-TA|BGIBMGA000722-PA|IPR002994|Surfeit locus 1
         (257 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35093-1|CAA84476.1|  300|Homo sapiens SURF-1 protein.                231   2e-60
BC071658-1|AAH71658.1|  300|Homo sapiens surfeit 1 protein.           231   2e-60
BC028314-1|AAH28314.1|  300|Homo sapiens surfeit 1 protein.           231   2e-60
AL158826-12|CAI12837.1|  300|Homo sapiens surfeit 1 protein.          231   2e-60
AL158826-11|CAI12836.1|  270|Homo sapiens surfeit 1 protein.          209   8e-54

>Z35093-1|CAA84476.1|  300|Homo sapiens SURF-1 protein.
          Length = 300

 Score =  231 bits (564), Expect = 2e-60
 Identities = 115/247 (46%), Positives = 157/247 (63%), Gaps = 3/247 (1%)

Query: 9   KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 68
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 69  MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTG 128
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREA-REGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 129 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDL 188
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+NNPE+  W YRDL
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDL 232

Query: 189 DQMSAHIGCLPIWLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYSLFAFTSIMWHR 248
           + M+   G  PI++DA      P G PI  QTRVTLRNEH  YIVTWY L A TS +W +
Sbjct: 233 EAMARITGAEPIFIDANFQSTVP-GGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFK 291

Query: 249 FFIRKLP 255
            F+R  P
Sbjct: 292 KFLRGTP 298


>BC071658-1|AAH71658.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score =  231 bits (564), Expect = 2e-60
 Identities = 115/247 (46%), Positives = 157/247 (63%), Gaps = 3/247 (1%)

Query: 9   KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 68
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 69  MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTG 128
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREA-REGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 129 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDL 188
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+NNPE+  W YRDL
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDL 232

Query: 189 DQMSAHIGCLPIWLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYSLFAFTSIMWHR 248
           + M+   G  PI++DA      P G PI  QTRVTLRNEH  YIVTWY L A TS +W +
Sbjct: 233 EAMARITGAEPIFIDANFQSTVP-GGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFK 291

Query: 249 FFIRKLP 255
            F+R  P
Sbjct: 292 KFLRGTP 298


>BC028314-1|AAH28314.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score =  231 bits (564), Expect = 2e-60
 Identities = 115/247 (46%), Positives = 157/247 (63%), Gaps = 3/247 (1%)

Query: 9   KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 68
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 69  MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTG 128
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREA-REGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 129 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDL 188
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+NNPE+  W YRDL
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDL 232

Query: 189 DQMSAHIGCLPIWLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYSLFAFTSIMWHR 248
           + M+   G  PI++DA      P G PI  QTRVTLRNEH  YIVTWY L A TS +W +
Sbjct: 233 EAMARITGAEPIFIDANFQSTVP-GGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFK 291

Query: 249 FFIRKLP 255
            F+R  P
Sbjct: 292 KFLRGTP 298


>AL158826-12|CAI12837.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score =  231 bits (564), Expect = 2e-60
 Identities = 115/247 (46%), Positives = 157/247 (63%), Gaps = 3/247 (1%)

Query: 9   KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 68
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 69  MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTG 128
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREA-REGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 129 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDL 188
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+NNPE+  W YRDL
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDL 232

Query: 189 DQMSAHIGCLPIWLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYSLFAFTSIMWHR 248
           + M+   G  PI++DA      P G PI  QTRVTLRNEH  YIVTWY L A TS +W +
Sbjct: 233 EAMARITGAEPIFIDANFQSTVP-GGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFK 291

Query: 249 FFIRKLP 255
            F+R  P
Sbjct: 292 KFLRGTP 298


>AL158826-11|CAI12836.1|  270|Homo sapiens surfeit 1 protein.
          Length = 270

 Score =  209 bits (510), Expect = 8e-54
 Identities = 111/247 (44%), Positives = 151/247 (61%), Gaps = 15/247 (6%)

Query: 9   KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 68
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 37  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 96

Query: 69  MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTG 128
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 97  LEYRPVKVRGCFDHSKELYMMPRTMVDPVR-EAREGGLISSSTQS-GAYVVTPFHCTDLG 154

Query: 129 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDL 188
                      + + P E R+   I+G V+L G+VRLTE R PF+P+NNPE+  W YRDL
Sbjct: 155 -----------KKVNP-ETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDL 202

Query: 189 DQMSAHIGCLPIWLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYSLFAFTSIMWHR 248
           + M+   G  PI++DA      P G PI  QTRVTLRNEH  YIVTWY L A TS +W +
Sbjct: 203 EAMARITGAEPIFIDANFQSTVP-GGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFK 261

Query: 249 FFIRKLP 255
            F+R  P
Sbjct: 262 KFLRGTP 268


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.139    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,359,744
Number of Sequences: 224733
Number of extensions: 1933767
Number of successful extensions: 2975
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2960
Number of HSP's gapped (non-prelim): 5
length of query: 257
length of database: 73,234,838
effective HSP length: 88
effective length of query: 169
effective length of database: 53,458,334
effective search space: 9034458446
effective search space used: 9034458446
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)