Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000721-TA|BGIBMGA000721-PA|IPR011904|Acetate--CoA
ligase, IPR000873|AMP-dependent synthetase and ligase
         (714 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    24   4.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   4.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   4.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   9.6  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 176 LAERLSDAKAKLLVTADGAWRGERMYVYKRTCDDAIEKARTFFKH 220
           + E ++  +A L++ ADGA+   R Y+         E ++T+ +H
Sbjct: 151 ITEEITTHQADLIIEADGAYSTLRRYM---QLTPLFEYSQTYIQH 192


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 176 LAERLSDAKAKLLVTADGAWRGERMYVYKRTCDDAIEKARTFFKH 220
           + E ++  +A L++ ADGA+   R Y+         E ++T+ +H
Sbjct: 151 ITEEITTHQADLIIEADGAYSTLRRYM---QLTPLFEYSQTYIQH 192


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 176 LAERLSDAKAKLLVTADGAWRGERMYVYKRTCDDAIEKARTFFKH 220
           + E ++  +A L++ ADGA+   R Y+         E ++T+ +H
Sbjct: 151 ITEEITTHQADLIIEADGAYSTLRRYM---QLTPLFEYSQTYIQH 192


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 415 NPAAWLWYYTRIGKERCSIVDTF 437
           N  A+LWY+ +I +E     D F
Sbjct: 165 NKTAFLWYHIKIDREDEEARDDF 187


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,712
Number of Sequences: 317
Number of extensions: 8398
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 714
length of database: 114,650
effective HSP length: 62
effective length of query: 652
effective length of database: 94,996
effective search space: 61937392
effective search space used: 61937392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)