GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000718-TA|BGIBMGA000718-PA|undefined
         (82 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LTH1 Cluster: Predicted protein; n=1; Pichia stipitis...    33   1.1  
UniRef50_A7SEH9 Cluster: Predicted protein; n=2; Nematostella ve...    33   1.4  
UniRef50_Q48791 Cluster: Tetracycline resistance protein tetS (T...    31   4.4  
UniRef50_Q8RE47 Cluster: Serine protease, V8 family; n=1; Fusoba...    31   5.8  
UniRef50_A2END7 Cluster: Putative uncharacterized protein; n=1; ...    31   5.8  
UniRef50_A0C2S9 Cluster: Chromosome undetermined scaffold_145, w...    31   5.8  
UniRef50_A7SUX6 Cluster: Predicted protein; n=1; Nematostella ve...    30   7.7  
UniRef50_A2GLM4 Cluster: GP63-like; n=11; Trichomonas vaginalis ...    30   7.7  
UniRef50_A2G9N1 Cluster: Putative uncharacterized protein; n=2; ...    30   7.7  
UniRef50_A7E744 Cluster: Putative uncharacterized protein; n=1; ...    30   7.7  

>UniRef50_A3LTH1 Cluster: Predicted protein; n=1; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 706

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 47  RTPSPINSSSEYEDNPLNYKMKGNKTID-LPLKKSKG 82
           ++P PIN +SE E+ PLN  +KG   +D LP K   G
Sbjct: 129 QSPVPINVASEPENKPLNPILKGKSPVDSLPPKPQVG 165


>UniRef50_A7SEH9 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 984

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 44  PRVRTPSPINSSSEYEDNPLNYKMKGNKTIDLPLKKSK 81
           PR  +P P N+ +E ED PL  K KG   I L  K+ K
Sbjct: 281 PRRSSPVPENAPNEPEDTPLTTKRKGRFNIALYSKRRK 318


>UniRef50_Q48791 Cluster: Tetracycline resistance protein tetS
           (Tet(S)); n=345; root|Rep: Tetracycline resistance
           protein tetS (Tet(S)) - Listeria monocytogenes
          Length = 641

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 39  FKEYVPRVRTPSPINSSSEYEDNPLNYKMKGNKTI 73
           F+ YVP+       N +S+Y  N LN K+KGN+ I
Sbjct: 542 FEIYVPQEYLSRAYNDASKYCANILNTKLKGNEVI 576


>UniRef50_Q8RE47 Cluster: Serine protease, V8 family; n=1;
           Fusobacterium nucleatum subsp. nucleatum|Rep: Serine
           protease, V8 family - Fusobacterium nucleatum subsp.
           nucleatum
          Length = 579

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 38  VFKEYVPRVRTPSPINSSSEYEDNPLNYK-MKGNKTIDLPLKK 79
           + KE VP +  P   N +S  +D PL Y  +   K  ++PL K
Sbjct: 292 IIKEIVPDIELPKENNITSSVDDEPLGYNPLFLGKDYEIPLPK 334


>UniRef50_A2END7 Cluster: Putative uncharacterized protein; n=1;
          Trichomonas vaginalis G3|Rep: Putative uncharacterized
          protein - Trichomonas vaginalis G3
          Length = 527

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 32 YQATLKVFKEYVPRVRTPSPINSSSEYEDNPLNYKMKGN 70
          Y  T+K+FK+Y    R+   +N+S+E E N +   +K N
Sbjct: 6  YMETMKLFKDYNDTFRSIFRLNTSNEDEINKIYINIKSN 44


>UniRef50_A0C2S9 Cluster: Chromosome undetermined scaffold_145,
          whole genome shotgun sequence; n=4; Paramecium
          tetraurelia|Rep: Chromosome undetermined scaffold_145,
          whole genome shotgun sequence - Paramecium tetraurelia
          Length = 281

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 25 IKDIDRAYQATLKVFKEYVPRVRTPSPINS-SSEYEDNPLNYK 66
          IK  ++  + T+ V K+ +P +++PS INS   + +DNPL  K
Sbjct: 18 IKQEEQKLKKTVLVSKDSLPEIKSPSIINSLLLDVDDNPLYRK 60


>UniRef50_A7SUX6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 479

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 46  VRTPSPINSSSEYEDNPLNYKMKGNKTIDLPLKKSK 81
           + +P P N+ +E ED PL  K KG   I L  K+ K
Sbjct: 105 ISSPVPENAPNEPEDTPLTTKRKGRFNIALYSKRRK 140


>UniRef50_A2GLM4 Cluster: GP63-like; n=11; Trichomonas vaginalis
           G3|Rep: GP63-like - Trichomonas vaginalis G3
          Length = 713

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 3   SSELTLGVGLRYVNEDLRLLCHIKDIDRAYQATLKVFKEYVPRVRTPSPINSSSEYEDNP 62
           + +L +  G+RY+ +   +L + K +  A + TL   K Y+ R+ T  P N +  Y D  
Sbjct: 68  AGQLVVFQGVRYICKQEHILSYSKIL--AIKGTLNNVKSYLERLLTVIPFNYNINYVDFR 125

Query: 63  LNYKMKGN 70
             Y  + N
Sbjct: 126 SRYGYETN 133


>UniRef50_A2G9N1 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 462

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 15  VNEDLRLLCHIKDIDRAYQATLKVFKEYVPRVRTPSPINSSSEYEDNPLNYKMKGNKTID 74
           + +D+     +KD  + YQ T   F++Y   V  P+      E  +NPL  K +  KT +
Sbjct: 124 IRKDVLKKALVKDFTQLYQMTEGEFEKYFNDVYAPAMKKERIEKVENPLVNKEEKKKTFE 183


>UniRef50_A7E744 Cluster: Putative uncharacterized protein; n=1;
          Sclerotinia sclerotiorum 1980|Rep: Putative
          uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 132

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 29 DRAYQATLKVFKEYVPRVRT 48
          D AY  T +++KEY PR+RT
Sbjct: 53 DFAYPHTYRIYKEYTPRIRT 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.314    0.133    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,955,252
Number of Sequences: 1657284
Number of extensions: 3311483
Number of successful extensions: 6299
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6292
Number of HSP's gapped (non-prelim): 10
length of query: 82
length of database: 575,637,011
effective HSP length: 61
effective length of query: 21
effective length of database: 474,542,687
effective search space: 9965396427
effective search space used: 9965396427
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)