GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000718-TA|BGIBMGA000718-PA|undefined
         (82 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050336-1|AAH50336.1| 1553|Homo sapiens FRYL protein protein.         27   7.2  
AK128543-1|BAC87492.1| 1433|Homo sapiens protein ( Homo sapiens ...    27   7.2  

>BC050336-1|AAH50336.1| 1553|Homo sapiens FRYL protein protein.
          Length = 1553

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 15   VNEDLRLLCHIKDID--RAYQATLKVFKEYVPRVRTPSPINSSSEYEDNPLNYKMKGNKT 72
            VN +  LL ++K +        T+++ +E V  ++   P++S   + DNP  Y++  +  
Sbjct: 1413 VNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYK 1472

Query: 73   I 73
            I
Sbjct: 1473 I 1473


>AK128543-1|BAC87492.1| 1433|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46702 fis, clone TRACH3014183. ).
          Length = 1433

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 15  VNEDLRLLCHIKDID--RAYQATLKVFKEYVPRVRTPSPINSSSEYEDNPLNYKMKGNKT 72
           VN +  LL ++K +        T+++ +E V  ++   P++S   + DNP  Y++  +  
Sbjct: 244 VNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYK 303

Query: 73  I 73
           I
Sbjct: 304 I 304


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.133    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,524,916
Number of Sequences: 224733
Number of extensions: 406729
Number of successful extensions: 658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 658
Number of HSP's gapped (non-prelim): 2
length of query: 82
length of database: 73,234,838
effective HSP length: 60
effective length of query: 22
effective length of database: 59,750,858
effective search space: 1314518876
effective search space used: 1314518876
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)