Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000717-TA|BGIBMGA000717-PA|IPR002181|Fibrinogen,
alpha/beta/gamma chain, C-terminal globular
(497 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 33 0.069
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 33 0.12
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.28
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 31 0.37
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 31 0.37
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 29 1.5
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 2.0
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 28 2.6
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 28 3.4
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 27 4.5
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 6.0
SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4 |Schiz... 27 6.0
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 6.0
SPAC16E8.10c |||mitochondrial ribosomal protein subunit S7|Schiz... 27 6.0
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 27 7.9
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 27 7.9
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 27 7.9
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 27 7.9
SPBC14C8.10 |mrpl24||mitochondrial ribosomal protein subunit L28... 27 7.9
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 7.9
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 27 7.9
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 33.5 bits (73), Expect = 0.069
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 339 YRISTLGTYYGTAGDS-LSYHAGQKFSTFDVDNDEWKDGSCAQEHGGAWWYKEC-DKSNL 396
++ + + Y ++ S L + AG +V D W DG C+++ G W+ C D S +
Sbjct: 3 FQTTAISDYENSSNPSFLKFSAGDTIIVIEVLEDGWCDGICSEKRG--WFPTSCIDSSKI 60
Query: 397 NGKYSTTTEENK 408
+S+ N+
Sbjct: 61 QNFFSSFHSSNE 72
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 190 VESILTVISEVKNRQYTKPLARSERVDRSERYPTDCFEIQMQGFNVSGIYKIKPDDMDSF 249
++ + ++ VKNR KP A + +D + Y D IQ+ F VS ++ PD ++ F
Sbjct: 349 LDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDLLEEF 408
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.5 bits (68), Expect = 0.28
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 14/207 (6%)
Query: 21 EVNRDKRGRRKNNHEDKTLWKEEYEKELTDAMLSSRRRDNVTRVPQSPGIGDNEAVIEKL 80
++ D+ ++ +HE T K YE +L D S RD + Q + E K
Sbjct: 1510 KIQVDESTIQELDHEI-TASKNNYEGKLNDK--DSIIRDLSENIEQLNNLLAEEKSAVKR 1566
Query: 81 METITSSE--KYFKKVESIDFRLNRLDIEIHEKTNSIAKQLGEIMKAVNSDAYGDKFETI 138
+ T SE ++ ++ +++ ++++ E+ +A E+ A N
Sbjct: 1567 LSTEKESEILQFNSRLADLEYHKSQVESELGRSKLKLASTTEELQLAENERLSLTTRMLD 1626
Query: 139 LETIKSDVSQIKYSLQMTPRSNNAGTEYQTDPSLDTKLSVLESNTKSILSGVESILTVIS 198
L+ D+S IK SL + +T SL+ ++ L+ K + VES+ V++
Sbjct: 1627 LQNQVKDLSNIKDSLS---------EDLRTLRSLEDSVASLQKECKIKSNTVESLQDVLT 1677
Query: 199 EVKNRQYTKPLARSERVDRSERYPTDC 225
V+ R S VD+ R C
Sbjct: 1678 SVQARNAELEDEVSRSVDKIRRRDDRC 1704
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 31.1 bits (67), Expect = 0.37
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 81 METITSSEKYFKKVESIDFRLNRLDIEIHEKTNSIAKQLGEIMKAVNSDAYGDKFETILE 140
++ ++ + + +++E+++ RL +LD E AK E AV KF+
Sbjct: 1018 LDQMSPNLRAIERLETVETRLAKLDEEF-AAARKAAKNAKERFNAVKQKRL-QKFQAAFS 1075
Query: 141 TIKSDVSQIKYSLQMTPRSNNAGTEYQTDPSLD 173
I + I L +P GT Y T LD
Sbjct: 1076 HISEQIDPIYKELTKSPAFPLGGTAYLTLDDLD 1108
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 31.1 bits (67), Expect = 0.37
Identities = 20/88 (22%), Positives = 39/88 (44%)
Query: 24 RDKRGRRKNNHEDKTLWKEEYEKELTDAMLSSRRRDNVTRVPQSPGIGDNEAVIEKLMET 83
RD+ + E++ L KE+ E+E+ R + +P P D A +
Sbjct: 277 RDRERQAFARAEEERLAKEKEEREIVQKKKKQYRAWLASNLPPEPSSEDEPARLSIRFPD 336
Query: 84 ITSSEKYFKKVESIDFRLNRLDIEIHEK 111
+ + + FKK ++++ N +D + EK
Sbjct: 337 GSRAVRRFKKDDTVESVYNYVDYMLFEK 364
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 29.1 bits (62), Expect = 1.5
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 111 KTNSIAKQLGEIMKAVNSDAYGDKFETILETIKSDVSQIKYSLQMTPRSNNAGTEYQTDP 170
+T I QL +I++ G K E I IK + +I +++ S A + D
Sbjct: 18 ETGLIIPQLKDILRVFGLRLSGTKAELITR-IKQLIERI--AIENNTTSWEA-LKKAIDG 73
Query: 171 SLDTKLSVLESNTKSILSGVESILTVISEVKNRQYTKPLA 210
+ + + +L+ NT I S I S NR Y++P A
Sbjct: 74 DVTSAVCILKYNTYQIYSAAAPIAPPSSASGNRSYSRPFA 113
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 59 DNVTRVPQSPGIGDNEAVIEKLMETITSSEKYFK 92
+NVT P++ G ++E L+E++TS+ Y K
Sbjct: 56 ENVTTWPENEGFRIEGTLLESLVESVTSASNYPK 89
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 28.3 bits (60), Expect = 2.6
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 261 GWTVFQN-RFDGSQDFYKGWSDYVNGFGNLAGEFWLGLEKVSFLTNQKLYELRIELEAQN 319
G+T Q ++ S Y WS V G G G WL + + + LT+Q L +++ +
Sbjct: 324 GYTAEQGCQWGTSSGDYGNWSPLVFGAGMTDGTTWLSISQ-NPLTSQ-LANYNVKIVGAD 381
Query: 320 GPEVFASYSVFTVGPEEEGYRISTLGTYYGT 350
G V + VF G + G T+G G+
Sbjct: 382 GASV-SGTCVFENGAFQNGGSGCTVGITSGS 411
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 186 ILSGVESILTVISEVKNRQYTKPLA 210
+LSG ES T++ E KN P+A
Sbjct: 259 VLSGFESCATIVEEAKNASKAAPIA 283
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 27.5 bits (58), Expect = 4.5
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 159 SNNAGTEYQTDPSLDTKLSVLESNTKSILSGVESILTVI---SEVKNRQYTKPLARSERV 215
S++ G ++ + L SN+++ L+ S + E + R+ TK + R E
Sbjct: 318 SDDDGDDFSNSKIEQSNLEKPPSNSENGLTMSRSDYLALLRNKEEEIRRMTKLILRLESN 377
Query: 216 DRSERYPTDCFEIQMQGFNVSGIYKIKPDDMDSFYVLCDLST 257
+ R PT ++++ V+ + +D+F + DLS+
Sbjct: 378 KKPYRSPTSAADMKLPSVPVAAVDNKSKTHLDTFEKVVDLSS 419
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 134 KFETILETIKSDVSQIKYSLQMTPRSNNAGTEYQTDPSLDTKLSVLESNTKSILSGVESI 193
+ E+ L+T K +V +K ++ +D +LD++L + N I + +E
Sbjct: 262 EMESSLQTSKQEVLILKEKIKKIEDERMRQMSVSSDRTLDSQLQTVNENITRISTSIELK 321
Query: 194 LTVISE 199
T + E
Sbjct: 322 NTALEE 327
>SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 6.0
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 74 EAVIEKLMETITSSEKYFKKVESIDFRLNRLDIEIHEKTNSIAKQLGEIMKAVNSDAYGD 133
+ ++++ I S Y V FRL D+ + KT+ L I+ A D+ +
Sbjct: 9 KGALKEIQAFIRSRTSY--DVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEAN 66
Query: 134 KFETILETIKSDVSQIKYSLQ 154
KF +L T+ V+ IKY Q
Sbjct: 67 KFAGLL-TMADFVNVIKYYYQ 86
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 6.0
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 389 KECDKSNLNGKYSTTTEENKGQSIYWISFKVPNYPLSKTKMMIRPLPAKRPTDFIDNSRK 448
K D++ + S ++ N G S Y PLS T+ RP+ + S
Sbjct: 429 KRFDETLARQERSQPSQRNGGSSTYESQDYREAAPLSPTEEESRPITRDELMKKLARSED 488
Query: 449 ISDGSKK---KPLPEKQSR 464
ISD S K +P P +SR
Sbjct: 489 ISDNSSKLVSEPEPPIRSR 507
>SPAC16E8.10c |||mitochondrial ribosomal protein subunit
S7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 85 TSSEKYFKKVESIDFRLN-RLDIEIHEKTNSIAKQLGEIMKAVNSDAYGDKFETILETIK 143
TS+EKY +K+E I+ R N + D + ++ QL + ++ SD + + E +E
Sbjct: 38 TSNEKYNEKIEDINERSNPQWD---NAGLENLLNQLQDSVEQSASDDFMGELEKKIEVEN 94
Query: 144 SDVSQIKYSLQMTPRSNNAG---TEYQTDPSLDTKLSVLESNTKSILSGVESILTVISEV 200
+ + +L +P S+ G +Q D ++ ++++ + K + + T +S +
Sbjct: 95 EEPPLMGTNLWPSPSSSIVGLIDRPFQVDSTVQHLVNLIMRDGKK-AKAEKIVATALSII 153
Query: 201 KNRQYTKPL 209
+ P+
Sbjct: 154 QKETGENPI 162
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 211 RSERVDRSERYPTDCFEIQMQGFNVSGIY-KIKPDDMDSFYVLCDLSTAGGGWTVFQNRF 269
R ++R T C +I+ + + ++ KI P+ ++ +L TA GGW F +
Sbjct: 381 RELALNRMRDLGTKCRDIRAREVGMQEVHHKIHPEQVE---LLRRDYTANGGWETFLSYE 437
Query: 270 DGSQDFYKG 278
D QD G
Sbjct: 438 DPKQDILIG 446
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 26.6 bits (56), Expect = 7.9
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 71 GDNEAVIEKLMETITSSEKYFKKVESIDFRLNRLDIEIHEKTNSIAKQLGEIMKAVNSDA 130
G++++ ++KL + + F K R N + ++ Q+ + + A NSDA
Sbjct: 520 GNHQSFLQKLNNQLPTKHSQFYKKS----RFNDGSFMVKHYALDVSYQVHDFL-AKNSDA 574
Query: 131 YGDKFETILETIKSDVSQIKYSLQMTPRSNNAGTEYQTDPSLDTKLSVLESNTKSILSGV 190
D+F ++L+ K++ I Y L + ++ + ++ K L S KS LS
Sbjct: 575 IPDEFISLLQNSKNEF--ITYLLDFYMQLVSSQNKNPRKTAISRK-PTLSSMFKSSLS-- 629
Query: 191 ESILTVISEVKNRQYTKPLARSE 213
++T +S N Y + + +E
Sbjct: 630 -QLMTTVSST-NVHYIRCIKPNE 650
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 424 LSKTKMMIRPLPAKRPTDFIDNSRKISDGSKKKPLPEKQSRVKDMKTKYDVKHNHPMYRY 483
L ++ M++ AK FI + SK KPL + R K + KYD + + RY
Sbjct: 100 LFRSSYMVQLQQAKNLRKFIVAPLDLFRDSKVKPLLQLNDRFKAEQAKYDAE----VLRY 155
Query: 484 DEHTHS 489
HS
Sbjct: 156 SSLGHS 161
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 7.9
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 389 KECDKSNLNGKYSTTTEENKGQSIYWISFKVPNYP---LSKTKMMIRPLPAKRPTDFI-- 443
K D + + +TE++KG+ Y ++P+ LS K I+ K+ D+
Sbjct: 384 KISDDDSPSNAEGASTEDSKGEVSY-SQIELPSLDSSNLSSKKSTIQSKHTKQAEDYDLF 442
Query: 444 -----DNSRKISDGSKKKPLPEKQSRVK 466
NS+ SD S K+PLP R K
Sbjct: 443 VGRTRSNSKTSSDQSIKRPLPRVVQRQK 470
>SPBC14C8.10 |mrpl24||mitochondrial ribosomal protein subunit
L28|Schizosaccharomyces pombe|chr 2|||Manual
Length = 176
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 70 IGDNEAVIEKLMETITSSEKYFKKVESIDFRLNR 103
+G ++EKL + ++Y +KV+ + +LNR
Sbjct: 121 LGAKNPILEKLPSDSGAQKRYLEKVKDVVLKLNR 154
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 163 GTEYQTDPSLDTKLSVLESNTKSILSGVESILTVISEVKNRQYTKPLARSERVDRSERYP 222
G+ D LD+ S S+T+ + ++S+ TV+ + K+ + + + ++ RYP
Sbjct: 4 GSSKHADSKLDSYPSFSRSDTQGSIKSLKSLKTVLGKGKDSNHDRRTS-TDTTHSRHRYP 62
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 390 ECDKSNLNGKYSTTT--EENKGQSIYWISFKVPNYPLSKTKMMIRP 433
E D S + G+ TT +E+ +YW + +PN KT + RP
Sbjct: 29 ERDLSGILGQIVTTNTLQEHGIPQVYWFNENIPNDIEKKTIYLCRP 74
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,399,470
Number of Sequences: 5004
Number of extensions: 108994
Number of successful extensions: 272
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 263
Number of HSP's gapped (non-prelim): 22
length of query: 497
length of database: 2,362,478
effective HSP length: 76
effective length of query: 421
effective length of database: 1,982,174
effective search space: 834495254
effective search space used: 834495254
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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