Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000716-TA|BGIBMGA000716-PA|IPR001628|Nuclear hormone
receptor, DNA-binding, IPR000536|Nuclear hormone receptor,
ligand-binding, IPR001723|Steroid hormone receptor, IPR000324|Vitamin
D receptor, IPR008946|Nuclear receptor, ligand-binding
(542 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 114 2e-27
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 114 2e-27
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 99 5e-23
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 99 5e-23
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 64 4e-12
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 49 9e-08
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 45 1e-06
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 27 0.30
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 3.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 6.4
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 114 bits (274), Expect = 2e-27
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 95 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCR 154
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E++C IDK QR RC +CR
Sbjct: 107 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCR 166
Query: 155 FQKCLDVGMKLEAVRADRMR 174
+QKCL +GMK EAV+ +R R
Sbjct: 167 YQKCLAMGMKREAVQEERQR 186
Score = 91.9 bits (218), Expect = 1e-20
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Query: 349 MCKVLDQNLFSQVDWARNTVFFKYLKVDDQMKLLQDSWSVMLVLDHLHQRMHNGLPDETT 408
+C ++ LF V WA++ F L ++DQ+ LL+ W+ +L+ H+ + + D
Sbjct: 234 ICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSID--VKDGIV 291
Query: 409 LHNGQKFDXXXXXXXXVPSLADH-FNELQNKLAELKFDVPDYICVKFMLLLNPEVRGIVN 467
L G V ++ D +EL +K+ E+K D + C++ ++L NPEVRG+ +
Sbjct: 292 LATGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNPEVRGLKS 351
Query: 468 VKCVREGYQTVQAALLDYTLTCYPTIQDKFGKLVMVVPEIHALAARGEEHLYQRHCAGQA 527
++ V + + AL Y +P +F KL++ +P I ++ + E+L+ G
Sbjct: 352 IQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDV 411
Query: 528 PTQTLLMEMLHAK 540
P L+EML ++
Sbjct: 412 PIDDFLVEMLESR 424
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 114 bits (274), Expect = 2e-27
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 95 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCR 154
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E++C IDK QR RC +CR
Sbjct: 107 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCR 166
Query: 155 FQKCLDVGMKLEAVRADRMR 174
+QKCL +GMK EAV+ +R R
Sbjct: 167 YQKCLAMGMKREAVQEERQR 186
Score = 91.9 bits (218), Expect = 1e-20
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Query: 349 MCKVLDQNLFSQVDWARNTVFFKYLKVDDQMKLLQDSWSVMLVLDHLHQRMHNGLPDETT 408
+C ++ LF V WA++ F L ++DQ+ LL+ W+ +L+ H+ + + D
Sbjct: 234 ICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSID--VKDGIV 291
Query: 409 LHNGQKFDXXXXXXXXVPSLADH-FNELQNKLAELKFDVPDYICVKFMLLLNPEVRGIVN 467
L G V ++ D +EL +K+ E+K D + C++ ++L NPEVRG+ +
Sbjct: 292 LATGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNPEVRGLKS 351
Query: 468 VKCVREGYQTVQAALLDYTLTCYPTIQDKFGKLVMVVPEIHALAARGEEHLYQRHCAGQA 527
++ V + + AL Y +P +F KL++ +P I ++ + E+L+ G
Sbjct: 352 IQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDV 411
Query: 528 PTQTLLMEMLHAK 540
P L+EML ++
Sbjct: 412 PIDDFLVEMLESR 424
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 99 bits (238), Expect = 5e-23
Identities = 41/74 (55%), Positives = 49/74 (66%)
Query: 95 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCR 154
EELC VCGD+ SGYHY LTCE CKGFF+R++ VY C C ID R++C CR
Sbjct: 184 EELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECR 243
Query: 155 FQKCLDVGMKLEAV 168
+KCL VGM+ E V
Sbjct: 244 LKKCLTVGMRPECV 257
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 99 bits (238), Expect = 5e-23
Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 11/102 (10%)
Query: 97 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY-TCVAERACHIDKTQRKRCPFCRF 155
LC VCGDK SG+HYG+ +CE CKGFF+R++Q K Y C + C I + R RC +CR
Sbjct: 66 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRL 125
Query: 156 QKCLDVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQ 197
+KC+ VGM +AVR FG + KR++AR L M+Q
Sbjct: 126 KKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 157
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 63.7 bits (148), Expect = 4e-12
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 115 CESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAV 168
CE CKGFF+R++ VY C C ID R++C CR +KCL VGM+ E +
Sbjct: 1 CEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECM 54
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 49.2 bits (112), Expect = 9e-08
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 119 KGFFKRTVQNKKVYT-CVAERACHIDKTQRKRCPFCRFQKCLDVGM 163
+GFF+R++Q K Y C + C I + R RC +CR +KC+ VGM
Sbjct: 39 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGM 84
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced protein
75 protein.
Length = 30
Score = 45.2 bits (102), Expect = 1e-06
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 97 LCPVCGDKVSGYHYGLLTCESCK 119
LC VCGDK SG+HYG+ +CE CK
Sbjct: 8 LCRVCGDKASGFHYGVHSCEGCK 30
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 27.5 bits (58), Expect = 0.30
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 72 GEPGAYLPTAGTVCDQTDTKDVIEELCPVCGDKVSGYHYGLLTCESCKGFFK 123
G+ YLP+ G C DV ++ C C + G +CE+C K
Sbjct: 236 GDGKWYLPSGGCHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEACPAHSK 287
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.8 bits (49), Expect = 3.7
Identities = 13/67 (19%), Positives = 29/67 (43%)
Query: 444 FDVPDYICVKFMLLLNPEVRGIVNVKCVREGYQTVQAALLDYTLTCYPTIQDKFGKLVMV 503
F++ ++ VK++ P ++ C + ++ T TI +KF KL+ +
Sbjct: 509 FNIIKFVPVKYLTYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFRKLIRI 568
Query: 504 VPEIHAL 510
++ L
Sbjct: 569 EDDVATL 575
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 4.9
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 320 VDDREWQNALFGLLQ-SQTYN-QCEVDLFELMCKVLDQNLFSQVDWARNTV 368
+D ++W N + L + YN + +D + ++ +QN+ +D A+NT+
Sbjct: 379 LDTKKWNNKISALRALNDLYNVKNTLDSYNGSMEI-NQNIAQNIDHAKNTI 428
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 6.4
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 444 FDVPDYICVKFMLLLNPEVRGIVNVKCVREGYQTVQAALLDYTLTCYPTIQDKFGKLVMV 503
F++ ++ VK++ P ++ C + ++ T TI +KF KL+ +
Sbjct: 562 FNIIKFVPVKYLTYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFRKLIRI 621
Query: 504 VPEIHAL 510
+ L
Sbjct: 622 EDNVATL 628
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.137 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,185
Number of Sequences: 429
Number of extensions: 5374
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 14
length of query: 542
length of database: 140,377
effective HSP length: 61
effective length of query: 481
effective length of database: 114,208
effective search space: 54934048
effective search space used: 54934048
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)
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