Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000715-TA|BGIBMGA000715-PA|IPR006089|Acyl-CoA
dehydrogenase, IPR006092|Acyl-CoA dehydrogenase, N-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR006090|Acyl-CoA dehydrogenase, type 1, IPR009100|Acyl-CoA
dehydrogenase/oxidase, middle and N-terminal, IPR009075|Acyl-CoA
dehydrogenase/oxidase C-terminal
(424 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD) iden... 208 7e-54
At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical ... 143 2e-34
At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low simi... 118 7e-27
At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac... 55 1e-07
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil... 49 7e-06
At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to ac... 48 1e-05
At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to ac... 48 2e-05
At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong simil... 44 1e-04
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 33 0.48
At2g14050.1 68415.m01563 minichromosome maintenance family prote... 32 0.83
At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme... 31 1.5
At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -relat... 31 1.9
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 2.5
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 2.5
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 2.5
At3g20520.1 68416.m02598 glycerophosphoryl diester phosphodieste... 30 2.5
At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]... 30 3.4
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 29 4.4
At4g23440.1 68417.m03379 expressed protein 29 5.9
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR... 29 5.9
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 29 7.8
>At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD)
identical to isovaleryl-CoA-dehydrogenase precursor
[Arabidopsis thaliana] GI:5596622
Length = 409
Score = 208 bits (507), Expect = 7e-54
Identities = 118/323 (36%), Positives = 175/323 (54%), Gaps = 4/323 (1%)
Query: 95 EVGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRLIDE 153
E GG+ +G C+ EE++ + + A S L ++ G Q++KYL +LI
Sbjct: 86 EYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISG 145
Query: 154 PLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLARTNPDPK 213
V A ++EP AGSDV G+K +AEK +ILNG KMW TNG A V A+T D K
Sbjct: 146 EHVGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKT--DTK 203
Query: 214 CPASKAFTGFIVEREWPGVTPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKI 273
SK T FI+E+ G + +K +G R SDT + FE+ +P+EN+L EG G +
Sbjct: 204 A-GSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYV 262
Query: 274 AMGAFDKTRPPVAAGATGLAQRALHEATKYSLERKTFGVPIARHQAVAFMLADMAIGVET 333
M D R +AAG G+ Q L Y +R+ FG P+ Q + +ADM +++
Sbjct: 263 LMSGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQS 322
Query: 334 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 393
+R A D+G+ + + A+E A + A A+Q GGNG+ EY +L+R
Sbjct: 323 SRSYVYSVARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLR 382
Query: 394 DAKIYQIYEGTSQIQRLIISREI 416
DAK+Y+I GTS+I+R++I RE+
Sbjct: 383 DAKLYEIGAGTSEIRRIVIGREL 405
Score = 49.6 bits (113), Expect = 4e-06
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 11 DEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWE-VGLMNGH---IPEHCGGL 66
D Q +E KF +D I P A + DKT +P V W+ +G N H PE GGL
Sbjct: 33 DTQLQFKESVSKFAQDNIAPHAERIDKTNSFPKDV--NLWKLMGEFNLHGITAPEEYGGL 90
Query: 67 GLGVFEACILSEELAYGCSGIMAAVY 92
GLG CI EE++ SG +A Y
Sbjct: 91 GLGYLYHCIAMEEIS-RASGSVALSY 115
>At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical to
Short-chain acyl CoA oxidase [Arabidopsis thaliana]
GI:5478795; contains InterPro entry IPR006089: Acyl-CoA
dehydrogenase
Length = 436
Score = 143 bits (346), Expect = 2e-34
Identities = 112/418 (26%), Positives = 183/418 (43%), Gaps = 41/418 (9%)
Query: 5 HFNEL-TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHC 63
HFN+L T E++A+++ R+ + E+ P+ +Y + E+P+ + K +G+ G I
Sbjct: 50 HFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIK--- 106
Query: 64 GGLGLGVFEACILSEELAYGCSGIMAAVYITEVGGMDMGVFDGCLVAEELAYGCTGIMTA 123
YGC G+ ++ + ++ D C+ +
Sbjct: 107 -----------------GYGCPGL--SITANAIATAEIARVDA---------SCSTFI-- 136
Query: 124 MEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDE 183
+ S LG I + G++ Q++KYL L VA + +TEP GSD +G+ T A K
Sbjct: 137 LVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGG 196
Query: 184 WILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMGQ 243
W +NGQK WI N A+ + AR + GFIV+++ PG+ + +G
Sbjct: 197 WKINGQKRWIGNSTFADLLIIFARNT------TTNQINGFIVKKDAPGLKATKIPNKIGL 250
Query: 244 RASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKY 303
R I ++V +P E+ L G + F+ +R VA G++ +Y
Sbjct: 251 RMVQNGDILLQNVFVPDEDRLPGVNS-FQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRY 309
Query: 304 SLERKTFGVPIARHQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNTVMASVAKCHAS 363
ERK FG P+A Q L M V+ + R + + GQ AS+ K S
Sbjct: 310 LKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWIS 369
Query: 364 EIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTAAT 421
A + A+ ++ GGNG ++ V K D + YEGT I L+ RE+ A+
Sbjct: 370 SKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIAS 427
>At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low
similarity to acyl-CoA dehydrogenase [Acinetobacter sp.
NCIMB9871] GI:14587418; contains Pfam profiles PF01636:
Phosphotransferase enzyme family, PF00441: Acyl-CoA
dehydrogenase C-terminal domain, PF02770: Acyl-CoA
dehydrogenase middle domain
Length = 824
Score = 118 bits (284), Expect = 7e-27
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 6/303 (1%)
Query: 126 ASGLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIKTRAEKKGDE 183
A G +I+ GNKEQ ++L L++ + + + +TEP A SD I+ ++GD
Sbjct: 521 APDTGNMEVILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSDATNIECSIRRQGDS 580
Query: 184 WILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMG- 242
+++NG K W + ++ D P K + +V+ PG++ R G
Sbjct: 581 YVINGTKWWTSGAMDPRCRVLILMGKTDFNAPKHKQQSMILVDMRTPGISVKRPLTVFGF 640
Query: 243 -QRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEAT 301
I+FE+V +P +N+L+GEG GF+IA G R G A+R +
Sbjct: 641 DDAPHGHAEISFENVVVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMA 700
Query: 302 KYSLERKTFGVPIARHQAVAFMLADMAIGVETARIAWQRAAWMVDH--GQKNTVMASVAK 359
+ +L RKTFG IA+H + LA + + +E R+ AA +D +K + ++AK
Sbjct: 701 QRALSRKTFGKFIAQHGSFVSDLAKLRVELEGTRLLVLEAADHLDKFGNKKARGILAMAK 760
Query: 360 CHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTA 419
A +A K A+QV G G +++ + L A+ +I +G ++ I + L
Sbjct: 761 VAAPNMALKVLDTAIQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIGKLELQR 820
Query: 420 ATQ 422
A++
Sbjct: 821 ASK 823
>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
Length = 675
Score = 54.8 bits (126), Expect = 1e-07
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 33/204 (16%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWILN-----GQK 190
G +EQQKK+L ++ Y TE G GS+V G++T A + K DE++++ K
Sbjct: 114 GTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASK 173
Query: 191 MWITN-GGVANWYFVLARTNPDPKCPASKAFTGFIVE-------REWPGVTPGRKEQNMG 242
W G V+ V AR + K GFIV+ P +T G MG
Sbjct: 174 WWPGGLGKVSTHAVVYARLITNGK---DYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMG 230
Query: 243 QRA---SDTRGITFEDVRIPKENVLI--------GE----GAGFKIAMGAFDKTRPPVAA 287
A D + F+ VRIP++ +L+ GE ++ G R + A
Sbjct: 231 NGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVA 290
Query: 288 GATGLAQRALHEATKYSLERKTFG 311
A+ RA+ AT+YS R+ FG
Sbjct: 291 DASNALSRAVCIATRYSAVRRQFG 314
>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase [Arabidopsis thaliana]
GI:3044214
Length = 664
Score = 48.8 bits (111), Expect = 7e-06
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWILN-----GQK 190
G ++QQ+K+L ++ Y TE G GS+V G++T A + K D++I++ K
Sbjct: 114 GTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSK 173
Query: 191 MWITN-GGVANWYFVLARTNPDPKCPASKAFTGFIVE-------REWPGVTP---GRKEQ 239
W G V+ + AR + K GFIV+ PG+T G K
Sbjct: 174 WWPGGLGKVSTHAVIYARLITNGK---DHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFG 230
Query: 240 NMGQRASDTRGITFEDVRIPKENVL------------IGEGAGFKIAMGAFDKTRPPVAA 287
N + D + F+ RIP++ +L + ++ G R + +
Sbjct: 231 NGAYNSMDNGFLMFDHFRIPRDQMLMRLSKVTREGKYVASDVPRQLVYGTMVYVRQSIVS 290
Query: 288 GATGLAQRALHEATKYSLERKTFG 311
A+ RA+ AT+YS R+ FG
Sbjct: 291 NASTALARAVCIATRYSAVRRQFG 314
>At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to
acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758,
GI:8515709
Length = 675
Score = 48.0 bits (109), Expect = 1e-05
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 31/204 (15%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIK--TRAEKKGDEWILN-----GQK 190
G K +K+L D + + +TE G GS+V GI+ T + K +E+++N QK
Sbjct: 165 GTKRHHEKWLKNTEDYVVKGCFAMTELGHGSNVRGIETVTTYDPKTEEFVINTPCESAQK 224
Query: 191 MWITNGGVAN---WYFVLARTNPDPKCPASKAFTGFIVERE---WPGVTPGRKEQNMGQR 244
WI GG AN V ++ + + AF I +++ P + +G
Sbjct: 225 YWI--GGAANHATHTIVFSQLHINGTNQGVHAFIAQIRDQDGSICPNIRIADCGHKIGLN 282
Query: 245 ASDTRGITFEDVRIPKENVL------IGEG---AGFKIAMGAFDKTRPPVAAGATGLAQR 295
D I F+++RIP+EN+L +G + K F P+ +G +A
Sbjct: 283 GVDNGRIWFDNLRIPRENLLNAVADVSSDGKYVSSIKDPDQRFGAFMAPLTSGRVTIASS 342
Query: 296 ALHE-------ATKYSLERKTFGV 312
A++ A +YSL R+ F V
Sbjct: 343 AIYSAKVGLSIAIRYSLSRRAFSV 366
>At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212
Length = 692
Score = 47.6 bits (108), Expect = 2e-05
Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 50/348 (14%)
Query: 119 GIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA- 177
GI ++ S G + +I G K+ + KY + + + +TE GS+V G++T A
Sbjct: 144 GIKMGVQYSLWGGS-VINLGTKKHRDKYFDGIDNLDYTGCFAMTELHHGSNVQGLQTTAT 202
Query: 178 -EKKGDEWILN-----GQKMWITNGGV-ANWYFVLAR---TNPDPKCPASKAFTGFIV-- 225
+ DE++++ K WI N V + V AR D K + FIV
Sbjct: 203 FDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPTHDSKGVSDMGVHAFIVPI 262
Query: 226 -EREWPGVTPGRKEQNMGQRAS----DTRGITFEDVRIPKENVL-----IGEGAGFKIAM 275
+ + PG + Q+ G + D + F VRIP++N+L + + ++
Sbjct: 263 RDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGTYTSSL 322
Query: 276 GAFDK----TRPPVAAGATGLAQRALHE-------ATKYSLERKTFGVP----------- 313
+K T + G GLA ++ A +YSL R+ FG P
Sbjct: 323 PTINKRFGATLGELVGGRVGLAYASVGVLKISATIAIRYSLLRQQFGPPKQPEVSILDYQ 382
Query: 314 IARHQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNT----VMASVAKCHASEIANKA 369
+H+ + + + A T + + + H ++ +++ K + + KA
Sbjct: 383 SQQHKLMPMLASTYAYHFATVYLVEKYSEMKKTHDEQLVADVHALSAGLKSYVTSYTAKA 442
Query: 370 ATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREIL 417
+ + GG+G+ L D I+Q +EG + + ++ ++L
Sbjct: 443 LSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLL 490
>At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase ACX3 GI:8163758 from
[Arabidopsis thaliana]
Length = 675
Score = 44.4 bits (100), Expect = 1e-04
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIK--TRAEKKGDEWILN-----GQK 190
G K +K+L D + + +TE G G++V GI+ T + +E+++N QK
Sbjct: 165 GTKRHHEKWLKDTEDYVVKGCFAMTELGHGTNVRGIETVTTYDPTTEEFVINTPCESAQK 224
Query: 191 MWITN-GGVANWYFVLARTNPDPKCPASKAFTGFIVERE---WPGVTPGRKEQNMGQRAS 246
WI AN V+++ + + F I + + P V +G
Sbjct: 225 YWIGEAANHANHAIVISQLSMNGTNQGIHVFIAQIRDHDGNTCPNVRIADCGHKIGLNGV 284
Query: 247 DTRGITFEDVRIPKENVL------IGEG---AGFKIAMGAFDKTRPPVAAGATGLAQRAL 297
D I F+++RIP+EN+L + +G + K F P+ +G +A A+
Sbjct: 285 DNGRIWFDNLRIPRENLLNSVADVLADGKYVSSIKDPDQRFGAFLAPLTSGRVTIASSAI 344
Query: 298 HE-------ATKYSLERKTFGV 312
+ A +YSL R+ F V
Sbjct: 345 YSAKLGLAVAIRYSLSRRAFSV 366
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 32.7 bits (71), Expect = 0.48
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 223 FIVEREWPGVTPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTR 282
F R P TP MG+R ++ T VR+ E V+ + A+ A + +
Sbjct: 40 FFGNRTSPFTTPTSAFLRMGRRNNNASRYTVGPVRVVNEKVVGIDLGTTNSAVAAMEGGK 99
Query: 283 PPVAAGATGLAQRALHEATKYSLERKTFGVPIARHQAV 320
P + A G QR Y+ + IA+ QAV
Sbjct: 100 PTIVTNAEG--QRTTPSVVAYTKSKDRLVGQIAKRQAV 135
>At2g14050.1 68415.m01563 minichromosome maintenance family protein
/ MCM family protein low similarity to SP|P49736 DNA
replication licensing factor MCM2 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 653
Score = 31.9 bits (69), Expect = 0.83
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 103 VFDGCLVAEELAYGCTGIMTAMEASGL---GQTPIIIAGN----KEQQKKYLGRLIDEPL 155
VF V +A G + ++ASG G++ +++ G+ K Q K+ +L + +
Sbjct: 320 VFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLIGDPGTGKSQFLKFAAKLSNRAV 379
Query: 156 VAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGV 198
+ G GS AG+ A K G EW+L + + +GG+
Sbjct: 380 ITT------GLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGL 416
>At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 421
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 105 DGCLVAEELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEP 164
DG V A C G + + G G T + I + ++L + D + YG++
Sbjct: 354 DGLFVGSSSAMNCVGAVRVAQTLGPGHTIVTIL--CDSGMRHLSKFHDPKYLNLYGLSPT 411
Query: 165 GAGSDVAGIK 174
G + GIK
Sbjct: 412 AIGLEFLGIK 421
>At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -related
similar to CLIP-associating protein CLASP2 (GI:13508651)
[Rattus norvegicus]
Length = 1439
Score = 30.7 bits (66), Expect = 1.9
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 310 FGVPIARHQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKA 369
F + RH ++M+ D+ +E + H N V AS S KA
Sbjct: 194 FREELQRHHLPSYMVKDINARLERIEPQLRSTDGRSAHHVVNEVKASSVNPKKSSPRAKA 253
Query: 370 ATDAVQVFGGNGFNTEYPVEKL 391
T +FGG+ TE P+E +
Sbjct: 254 PTRENSLFGGDADITEKPIEPI 275
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 382 FNTEYPVEKLMRDAKIYQIYEGTSQIQRL 410
FN E+ VE MR +K+ +++EGT Q++ L
Sbjct: 713 FNPEFLVELDMRCSKLRKLWEGTKQLRNL 741
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 382 FNTEYPVEKLMRDAKIYQIYEGTSQIQRL 410
FN E+ VE MR +K+ +++EGT Q++ L
Sbjct: 713 FNPEFLVELDMRCSKLRKLWEGTKQLRNL 741
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 382 FNTEYPVEKLMRDAKIYQIYEGTSQIQRL 410
FN E+ VE MR +K+ +++EGT Q++ L
Sbjct: 713 FNPEFLVELDMRCSKLRKLWEGTKQLRNL 741
>At3g20520.1 68416.m02598 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to glycerophosphodiester phosphodiesterase
(GI:1399038) [Borrelia hermsii]
Length = 729
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 4 PHFNELTDEQK-ALQELARKFTKDEIIPVAGQYDKTGEY 41
PH + +TD K LQ A +F D +I YD T EY
Sbjct: 256 PHTSLVTDAHKEGLQVFASEFANDFVIAYNYSYDPTAEY 294
>At3g44670.1 68416.m04804 disease resistance protein
RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain
signature TIR-NBS-LRR exists, suggestive of a disease
resistance protein. Closest Col-0 homolog to both RPP1
Ws-A and RPP1 Ws-C
Length = 872
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 360 CHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRL 410
CH+ +I + + + FN E+ VE M +K+ +++EGT Q++ L
Sbjct: 321 CHSPKIRSLKWYSYQNICLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNL 371
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 382 FNTEYPVEKLMRDAKIYQIYEGTSQIQRL 410
FN E+ VE MR + + +++EGT Q++ L
Sbjct: 688 FNPEFLVELDMRSSNLRKLWEGTKQLRNL 716
>At4g23440.1 68417.m03379 expressed protein
Length = 964
Score = 29.1 bits (62), Expect = 5.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 173 IKTRAEKKGDEWILNGQKMWITNGGV 198
++ EK+GD W +G ++W+ GG+
Sbjct: 231 VRDIVEKRGDLWEKHGGELWVLYGGI 256
>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 382 FNTEYPVEKLMRDAKIYQIYEGTSQIQRL 410
FN E+ VE M +K+ +++EGT Q++ L
Sbjct: 644 FNPEFLVELDMSSSKLRKLWEGTKQLRNL 672
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 382 FNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTAATQ 422
F E+ VE MRD+K+ +++EG ++ L R L+A+T+
Sbjct: 611 FRPEFLVELTMRDSKLEKLWEGIQPLKSL--KRMDLSASTK 649
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,059,029
Number of Sequences: 28952
Number of extensions: 432703
Number of successful extensions: 899
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 866
Number of HSP's gapped (non-prelim): 25
length of query: 424
length of database: 12,070,560
effective HSP length: 83
effective length of query: 341
effective length of database: 9,667,544
effective search space: 3296632504
effective search space used: 3296632504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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