Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000715-TA|BGIBMGA000715-PA|IPR006089|Acyl-CoA
dehydrogenase, IPR006092|Acyl-CoA dehydrogenase, N-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR006090|Acyl-CoA dehydrogenase, type 1, IPR009100|Acyl-CoA
dehydrogenase/oxidase, middle and N-terminal, IPR009075|Acyl-CoA
dehydrogenase/oxidase C-terminal
(424 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 192 6e-49
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 130 2e-30
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 127 1e-29
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 125 6e-29
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 118 7e-27
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907... 97 2e-20
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 52 7e-07
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 45 1e-04
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 39 0.009
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 33 0.57
01_05_0130 - 18434678-18435688 32 1.0
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 31 1.7
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 31 1.7
08_01_0267 - 2153421-2153759,2153895-2154098,2154358-2154429,215... 29 7.1
10_08_0505 + 18384392-18384454,18384593-18384679,18385878-183864... 29 9.3
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 192 bits (467), Expect = 6e-49
Identities = 122/344 (35%), Positives = 175/344 (50%), Gaps = 26/344 (7%)
Query: 95 EVGGMDMGVFDGCLVAEEL--AYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLID 152
E GGM +G C+ EE+ A G G+ S L ++ G+ Q+ KYL +LI
Sbjct: 86 EYGGMGLGYMYHCIAMEEISRASGSVGLSYGAH-SNLCINQLVRHGSPAQKLKYLPKLIS 144
Query: 153 EPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 212
V A ++EP +GSDV +K +AEK +++NG KMW TNG A V A+T+
Sbjct: 145 GEHVGALAMSEPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDI-- 202
Query: 213 KCPASKAFTGFIVEREWPGVTPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFK 272
SK T FI+E+ PG + +K +G R SDT + FE+ +P ENVL EG G
Sbjct: 203 -AAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVY 261
Query: 273 IAMGAFDKTRPPVAAGATGLAQRALHEATKYSLERKTFGVPIARHQAVAFM--------- 323
+ M D R +AAG GL Q L A Y +R+ FG PI Q +
Sbjct: 262 VMMSGLDLERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQVQHFVNRRLVP 321
Query: 324 -----------LADMAIGVETARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATD 372
LADM ++++R A D+G+ + + A+E A + A
Sbjct: 322 TITSYLLMQGKLADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFAAERATQVALQ 381
Query: 373 AVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREI 416
A+Q GGNG+ EYP +L+RDAK+++I GTS+I+R+II RE+
Sbjct: 382 AIQCLGGNGYINEYPTGRLLRDAKLFEIGAGTSEIRRMIIGREL 425
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 130 bits (314), Expect = 2e-30
Identities = 111/416 (26%), Positives = 175/416 (42%), Gaps = 46/416 (11%)
Query: 9 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGLGL 68
LT E++++++ R + EI P+ Y + E+P+ + K +G+ G I
Sbjct: 50 LTTEEQSIRKNVRAIMEKEIAPIMATYWEKAEFPFHAIPKLSSLGVAGGTIK-------- 101
Query: 69 GVFEACILSEELAYGCSGIM---AAVYITEVGGMDMGVFDGCLVAEELAYGCTGIMTAME 125
YGC G+ +A+ + E+ +D LV LA
Sbjct: 102 ------------GYGCPGLSITASAITMAEIARVDASCSTFILVHSSLA----------- 138
Query: 126 ASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 185
I + G++ Q++KYL L V + +TEP GSD + + T A K W
Sbjct: 139 -----MVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASSLITTATKVPGGWH 193
Query: 186 LNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMGQRA 245
++GQK WI N A+ VLAR +K GFIV + PG+ + E +G R
Sbjct: 194 IDGQKRWIGNSTFADVLVVLARN------ANTKQLNGFIVRKGAPGLKATKIENKIGLRM 247
Query: 246 SDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKYSL 305
I F V +P+E+ L G + F+ +R VA G++ +Y
Sbjct: 248 VQNGDIVFNKVFVPEEDRLPGVNS-FQDISKVLAISRVMVAWQPIGISMGVFDVCHRYLK 306
Query: 306 ERKTFGVPIARHQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNTVMASVAKCHASEI 365
ERK FGVP+ Q L M ++ + R + + G+ AS+ K S +
Sbjct: 307 ERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKGWTSRM 366
Query: 366 ANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTAAT 421
A + + ++ GGNG ++ V K D + YEGT I L+ REI A+
Sbjct: 367 AREVVSLGRELLGGNGILADFLVAKAFCDLEPIYSYEGTYDINSLVTGREITGIAS 422
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 127 bits (307), Expect = 1e-29
Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 5/275 (1%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIKTRAEKKGDEWILNGQKMWITNG 196
G KEQQK++L L++ + + + +TEP A SD I+ ++GD +++NG K W +
Sbjct: 509 GTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGTKWWTSGA 568
Query: 197 GVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMG--QRASDTRGITFE 254
++ D P K + +V+ + PGV R G ITFE
Sbjct: 569 MDPRCQILVLMGKTDFSAPKHKQQSMILVDVKTPGVQIRRPLLVFGFDDAPHGHAEITFE 628
Query: 255 DVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKYSLERKTFGVPI 314
+VR+P N+L+GEG GF+IA G R G A+R ++ + +L R TFG I
Sbjct: 629 NVRVPATNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTFGKKI 688
Query: 315 ARHQAVAFMLADMAIGVETARIAWQRAAWMVD-HGQKNT-VMASVAKCHASEIANKAATD 372
A+H + LA + +E AR+ AA +D HG K + ++AK A +A K
Sbjct: 689 AQHGSFLADLAKCRVELEQARLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALKVLDM 748
Query: 373 AVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQI 407
A+QV GG G +++ + L A+ +I +G ++
Sbjct: 749 AMQVHGGAGLSSDTVLSHLWATARTLRIADGPDEV 783
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 125 bits (302), Expect = 6e-29
Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 134 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWI 193
I + G++ Q++KYL L + + +TEP GSD + ++T A K W L+GQK WI
Sbjct: 119 IALCGSEAQKQKYLPSLTQFRTIGCWALTEPDYGSDASSLRTAATKVPGGWHLDGQKRWI 178
Query: 194 TNGGVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMGQRASDTRGITF 253
NG A+ +LAR N D + GFIV++ PG+ + E +G R I
Sbjct: 179 GNGTFADVLIILAR-NSD-----TNQLNGFIVKKGAPGLKCTKIENKIGLRMVQNADIVL 232
Query: 254 EDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKYSLERKTFGVP 313
V +P E+ L G + F+ +R VA G++ +Y ERK FGVP
Sbjct: 233 NKVFVPDEDRLTGINS-FQDINKVLAMSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVP 291
Query: 314 IARHQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDA 373
+A Q L M ++ + R + + G+ AS+ K S+ A + +
Sbjct: 292 LAAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGKAWTSKKAREVVSLG 351
Query: 374 VQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTAAT 421
++ GGNG ++ V K D + YEGT I L+ REI A+
Sbjct: 352 RELLGGNGILADFLVAKAFCDLEPIFSYEGTYDINSLVTGREITGIAS 399
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 9 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNG 57
LTDE+K L++ R + EI P+ +Y + E+P+ + K +GL G
Sbjct: 47 LTDEEKTLRKKVRGIMEREIAPIMTEYWEKAEFPFHAIPKLATLGLAGG 95
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 118 bits (285), Expect = 7e-27
Identities = 120/435 (27%), Positives = 185/435 (42%), Gaps = 71/435 (16%)
Query: 9 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGLG 67
LT+E+K LQ R+F ++E+ P+ ++ + E+P+ ++ K +G+ G I + C GL
Sbjct: 61 LTEEEKDLQIKVRQFMENEVAPIISKFWEKAEFPFHLIPKMSTLGIAGGTIKGYGCPGL- 119
Query: 68 LGVFEACILSEELAYGCSGIMAAVYITEVGGMDMGVFDGCLVAEELAYGCTGIMTAMEAS 127
SG A+ E+ +D + CLV S
Sbjct: 120 -----------------SGPACAMCFLEIARVDASIASFCLVQ----------------S 146
Query: 128 GLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILN 187
L I G++ Q++KYL L V Y ++EP GSD + + T A K WILN
Sbjct: 147 CLAMVSIAQLGSEAQKEKYLRPLSKMQKVCVYALSEPNHGSDASSLNTTARKVPGGWILN 206
Query: 188 GQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMGQRASD 247
GQK W N A+ + VLA ++ GFIV PG+ + + M R
Sbjct: 207 GQKRWPANSSFADIFVVLACNT------STNQINGFIVNGGAPGLKISKIDNKMSLRVVQ 260
Query: 248 TRGITFEDVRIPKENVLIGEGAG---FKI------AMGAFDKT------------RPPVA 286
I EDV +P ++ L G + KI +G D T R VA
Sbjct: 261 NCDILLEDVFVPDDDRLPGANSFQDLVKIYSISPHTIGDTDLTDYVAYIQALSFSRVIVA 320
Query: 287 AGATGLAQRALHEATKYSLERKTFGVPIARHQAVAFMLADMAIGVETARIAWQRAAWMVD 346
+ G+A +Y ERK FG P+A AF L + + W R + D
Sbjct: 321 WISIGIAAGVYDACLRYLGERKQFGAPLA-----AFQLNQEKL---MWLLGW-RLYELHD 371
Query: 347 HGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQ 406
G+ T AS+ K ++ A + ++ GGNG T++ V K D + YEG+ +
Sbjct: 372 SGRMTTGQASLGKAWITKKARETVALGRELLGGNGIVTDFHVGKAFCDMESLYTYEGSYE 431
Query: 407 IQRLIISREILTAAT 421
+ LI++R+I A+
Sbjct: 432 VNALIVARDITGIAS 446
>06_02_0285 +
13789900-13790071,13790407-13790525,13790642-13790751,
13790887-13791046,13791407-13791483,13792299-13792470,
13792580-13792672,13793617-13793733
Length = 339
Score = 97.1 bits (231), Expect = 2e-20
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 7/238 (2%)
Query: 184 WILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVEREWPGVTPGRKEQNMGQ 243
WILNGQK W NG A+ + VLA ++ GFIV PG+ + E
Sbjct: 102 WILNGQKRWPANGSFADVFVVLACNT------SNNQINGFIVNGGSPGLKISKIENKTSL 155
Query: 244 RASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKY 303
R I EDV +P ++ L G + F+ + A + VA + G+A +Y
Sbjct: 156 RVVQNCDILLEDVFVPDDDRLPGANS-FQDLVKALSFSCVIVAWISIGIAAGVYDACLRY 214
Query: 304 SLERKTFGVPIARHQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNTVMASVAKCHAS 363
ERK FG P+A Q L M ++ + R + D G+ T AS+ K +
Sbjct: 215 LGERKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQASLGKAWIT 274
Query: 364 EIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTAAT 421
+ A + ++ GGNG T++ V K D + YEG+ ++ L+ +REI A+
Sbjct: 275 KQARETVALGRELLGGNGIVTDFHVGKAFCDMESIYTYEGSYEVNVLVAAREITGIAS 332
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 52.4 bits (120), Expect = 7e-07
Identities = 83/334 (24%), Positives = 134/334 (40%), Gaps = 52/334 (15%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWI-----LNGQK 190
G +EQQKK+L ++ Y TE G GS+V G++T A + K DE++ L K
Sbjct: 119 GTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSK 178
Query: 191 MWITNGGVANWYFVL-ARTNPDPKCPASKAFTGFIVERE-------WPGVTPGRKEQNMG 242
W G A+ + V+ AR + K GFIV+ PGVT G G
Sbjct: 179 WWPGGLGKASTHAVVYARLITEGK---DYGIHGFIVQLRSLEDHSPLPGVTLGDIGGKFG 235
Query: 243 QRA---SDTRGITFEDVRIPKENVLIG------EGAGF------KIAMGAFDKTRPPVAA 287
A D + F+ VRIP++ +L+ EG ++ G R + A
Sbjct: 236 SGAYNSMDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYGTMVFVRQTIVA 295
Query: 288 GATGLAQRALHEATKYSLERKTFG-------VPIARHQAVAFMLADMAIGVETARIAWQR 340
A+ RA A +YS RK FG + ++ L + R +
Sbjct: 296 DASKALSRATCIAVRYSAIRKQFGPQTGGPETQVLNYKTQQSRLFPLLASAYAFRFVGEW 355
Query: 341 AAWM---VDHGQKNTVMASVAKCHASEIANKAAT-----DAVQ----VFGGNGFNTEYPV 388
W+ V H + +++ + HA KA T D ++ + GG+G+ +
Sbjct: 356 LKWLYTDVTHKLEAKDFSTLQEAHACTAGLKAVTTSATADGIEECRKLCGGHGYLNSSGL 415
Query: 389 EKLMRDAKIYQIYEGTSQIQRLIISREILTAATQ 422
+L YEG + + L ++R ++ +Q
Sbjct: 416 PELFAIYVPACTYEGDNVVLLLQVARFLMKTVSQ 449
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 44.8 bits (101), Expect = 1e-04
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 138 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWILN-----GQK 190
G K K+L + + + +TE G GS+V GI+T A + K E+++N QK
Sbjct: 173 GTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIETVATYDIKTREFVINTPCESAQK 232
Query: 191 MWITNGGVAN---WYFVLARTNPDPKCPASKAFTGFI---VEREWPGVTPGRKEQNMGQR 244
WI GG AN V A+ + + + AF I E P + +G
Sbjct: 233 YWI--GGAANHATHTIVFAQLHINGRNEGVHAFVAQIRDEHENVMPNIQIADCGHKIGLN 290
Query: 245 ASDTRGITFEDVRIPKENVL 264
D I F ++R+P+EN+L
Sbjct: 291 GVDNGRIWFNNIRVPRENLL 310
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 38.7 bits (86), Expect = 0.009
Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 50/334 (14%)
Query: 134 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWILNGQ-- 189
II G K+ + ++ + + + +TE GS+V ++T A + DE+I+N
Sbjct: 164 IINLGTKKHRDRFFDGIDNLDYPGCFAMTELHHGSNVQALQTTATFDPVTDEFIINTPND 223
Query: 190 ---KMWITNGGV-ANWYFVLART-------NPDPKCPASKAFTGFIVEREWPGVTPGRKE 238
K WI N + + V AR DP AF I + + V PG +
Sbjct: 224 GAIKWWIGNAALHGKFATVFARLILPLQGKGGDPADMGIHAFIVPIRDLDTNAVLPGIEI 283
Query: 239 QNMGQRAS----DTRGITFEDVRIPKENVL--IGE--------------GAGFKIAMGAF 278
+ G + D + F VRIP++N+L G+ F +G
Sbjct: 284 NDCGHKIGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGEL 343
Query: 279 DKTRPPVAAGATGLAQRALHEATKYSLERKTFGVP------IARHQAVAFMLADMAIGVE 332
R +A + G+ + ++ A +Y+L R+ FG P + +Q+ L M
Sbjct: 344 VGGRVGIAYSSVGILKVSVTIAVRYALLRQQFGPPKKPEISVLDYQSHQHKLMPMLASSY 403
Query: 333 TARIAWQRAAWMVDHGQKNT---------VMASVAKCHASEIANKAATDAVQVFGGNGFN 383
A + +K V++S K + + K+ + + GG+G+
Sbjct: 404 AFHFATRYLVDKYSEMKKTNDEDVMADVHVLSSGLKAYITSYTAKSISVCRESCGGHGYA 463
Query: 384 TEYPVEKLMRDAKIYQIYEGTSQIQRLIISREIL 417
L D I+Q +EG + + ++ ++L
Sbjct: 464 AVNRFGALRNDHDIFQTFEGDNTVLLQQVAGDLL 497
>03_05_1071 +
30133696-30133874,30134294-30135200,30135224-30135358,
30135545-30136553,30136699-30136703
Length = 744
Score = 32.7 bits (71), Expect = 0.57
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 206 ARTNPDPKCPASKAFTGFIVEREWPG--VTPGRKEQNMGQRASDTRGITFEDVRIPKEN- 262
A T+ P P+ TG + G V+ K Q +G A +DV + E
Sbjct: 306 AGTSAGPLLPSGGGATGSASVQATGGSAVSVDAKGQPIGASAKGK-----DDVIVSAEGA 360
Query: 263 VLIGEGAGFKIAMGAFDKTRPPVAAGATGLAQRALHEATKYSLERK 308
+L G GA +A G D T PVA+G G LH +SLE++
Sbjct: 361 ILAGSGAIIALADGKGDSTAGPVASGTGGNVLSLLH-GNLHSLEQQ 405
>01_05_0130 - 18434678-18435688
Length = 336
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 43 WPVVKKAWEVGLMNGHIPEHCGGLGL--GVFEACILSEELAYGCSGIMAAVYITEVGGMD 100
W V+ A +GL H+ G L L GV ++ L + G AA TEVG M
Sbjct: 199 WTVLPAAMPLGLTTAHLFVFGGRLFLVGGVERFGVVERVLVWRLEGSEAAAEWTEVGAMP 258
Query: 101 MGVFD 105
VFD
Sbjct: 259 EEVFD 263
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 127 SGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWIL 186
+ LG + I + +K + ++ID + AY + G I T AE+ DEW+L
Sbjct: 468 TSLGASTCIFNSDILHDEKVIDQIIDTRIKVAYALARQWFG-----IYTNAEEATDEWLL 522
Query: 187 NGQKMWIT 194
+G ++T
Sbjct: 523 DGLAGFLT 530
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 161 VTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGV 198
V G GS AG+ A K G EW+L + + +GG+
Sbjct: 394 VITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGL 431
>08_01_0267 -
2153421-2153759,2153895-2154098,2154358-2154429,
2154514-2154599,2154704-2154830,2154899-2155052,
2156129-2156451
Length = 434
Score = 29.1 bits (62), Expect = 7.1
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 292 LAQRALHEATKYSLERKTFGVPIARHQAVAF-MLADMAIGVETARIAWQRAA--WMVDHG 348
L R + S R+ +PI + A +L++ G E+ R R A W+ G
Sbjct: 33 LRYRRSQAQIRSSSSRRASTIPIRANGVNACTILSNSTTGQESPREVEDRGASMWLEGPG 92
Query: 349 QKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVE 389
+K+ + AS +A + KA ++ + G F Y +
Sbjct: 93 RKSVISASGIPKYAYKELQKATSNFTTLLGQGAFGPVYKAD 133
>10_08_0505 +
18384392-18384454,18384593-18384679,18385878-18386409,
18387042-18387564,18387734-18387791
Length = 420
Score = 28.7 bits (61), Expect = 9.3
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 11/151 (7%)
Query: 260 KENVLIGE--GAGFKIAMGAFDKTRPPVAAGATGL-AQRALHEATKYSLERKTFGVPIAR 316
K++ +G G G K+ A V+ + + AQ + ++ G R
Sbjct: 25 KDSAFLGVRLGDGLKLETSALGLRTKRVSTSSVAIRAQASAAVSSPTVTPASPSGKQTLR 84
Query: 317 HQAVAFMLADMAIGVETARIAWQRAAWMVDHGQKNTVMAS-VAKCHASEIANK------- 368
A +G+ TA+ + W V G ++ + AS AK E +
Sbjct: 85 KGTAVITGASSGLGLATAKALAETGRWHVVMGCRDFLKASRAAKAAGMEKGSYTIVHLDL 144
Query: 369 AATDAVQVFGGNGFNTEYPVEKLMRDAKIYQ 399
A+ D+V+ F N E PV+ ++ +A +YQ
Sbjct: 145 ASLDSVRQFVANVRRLEMPVDVVVCNAAVYQ 175
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,954,283
Number of Sequences: 37544
Number of extensions: 582618
Number of successful extensions: 1186
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 23
length of query: 424
length of database: 14,793,348
effective HSP length: 84
effective length of query: 340
effective length of database: 11,639,652
effective search space: 3957481680
effective search space used: 3957481680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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