Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000714-TA|BGIBMGA000714-PA|IPR013057|Amino acid
transporter, transmembrane
(464 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08) 116 4e-26
SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05) 95 1e-19
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 6e-19
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 5e-16
SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 5e-14
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 74 3e-13
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 1e-12
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-11
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 3e-11
SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 3e-11
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 9e-09
SB_31832| Best HMM Match : FtsX (HMM E-Value=2.8) 58 1e-08
SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35) 52 1e-06
SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-05
SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35) 45 1e-04
SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 40 0.003
SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 40 0.003
SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018) 36 0.069
SB_55843| Best HMM Match : Aa_trans (HMM E-Value=0.00091) 35 0.12
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.28
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07) 33 0.64
SB_21462| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.85
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02) 31 2.6
SB_45928| Best HMM Match : Uso1_p115_C (HMM E-Value=0.54) 30 3.4
SB_4982| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-21) 29 7.9
SB_1637| Best HMM Match : Ion_trans (HMM E-Value=7.6e-10) 29 7.9
>SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08)
Length = 373
Score = 116 bits (279), Expect = 4e-26
Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 13/274 (4%)
Query: 144 ANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINERFXXXXXXXXXXXMA 203
A+ RI I I L IT FG C++Y + +A ++ Q Y ++ + ++
Sbjct: 87 AHIGRILINIFLLITMFGFCAIYFLFVAESLQQAFDAYTSFKLDVKLWVLIILVPVILLS 146
Query: 204 WIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTI 263
+IR LK LA +S ++N+ G L Y G +D L + + P F +
Sbjct: 147 FIRTLKILAVLSSVSNVLALFGTVCVLSY---AGSTVHDPSTLPLTQWKT-LPLAFGAVV 202
Query: 264 FAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSIT 323
F E IGV++P+EN M PR VL GMS VTL+Y+L+G LGYL G Q SIT
Sbjct: 203 FTYEGIGVILPVENMMAIPRRFRW---VLYAGMSLVTLLYLLMGVLGYLSCGTSCQGSIT 259
Query: 324 LSLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKR-PELADYIMRTIMV 382
L+L + VKL IA +++ T+ +QF+V I++ +K + + L D R ++V
Sbjct: 260 LNLPNTPFYMSVKLIIAASIFLTYFIQFYVITSILFPFVKGRVRQTIAPLVDIAFRMLLV 319
Query: 383 ----TVCVSIAAAVPQISPLMGVIGAFCF-SILG 411
T C + + + +G+I F S++G
Sbjct: 320 CFTATFCYDKSLSTLSLIKDIGIIVIGVFGSVIG 353
>SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05)
Length = 332
Score = 95.1 bits (226), Expect = 1e-19
Identities = 58/183 (31%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 271 VVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSLGDAI 330
+V+P+EN M+TPR VLN MS V ++Y+++G +GY+ + S TL+L D
Sbjct: 134 LVLPVENMMRTPR---DFTWVLNLAMSVVVILYLVVGTMGYISCAAMCKGSFTLNLPDTP 190
Query: 331 PAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKRPE-LADYIMRTIMVTVCVSIA 389
+KL IA +++ T+ LQF+V ++I+ + + +K+ + +AD RT +V V V +A
Sbjct: 191 FYTTLKLLIAGSMFLTYFLQFYVPVEILLPSVLKRVSKKYQTVADLGFRTSLVLVTVVLA 250
Query: 390 AAVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGTFSL 449
A VP++ ++ VIG+ + L + PA +++ + YL+ K+I++++ G
Sbjct: 251 ACVPRLEDVIAVIGSLASTTLCMTFPAAMDIASL-RMSSKLTWYLLLKDIVIILIGITGS 309
Query: 450 VFG 452
V G
Sbjct: 310 VTG 312
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 52 LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLI 87
+ T++ +L HL+K +G G+ MP A AGL+
Sbjct: 99 MSNTTTSFTSLMHLIKGCVGIGVYGMPLAVAYAGLL 134
>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 92.7 bits (220), Expect = 6e-19
Identities = 100/398 (25%), Positives = 167/398 (41%), Gaps = 43/398 (10%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLY---KKTKKTQMSFAE 127
G GIL +P A + G+ + V VA+VC +LV C + + +K K+ + ++ E
Sbjct: 117 GMGILGIPYAVREGGIAAAVCIFV-VAIVCDVTGILLVDCLYEISPRSQKKKRIRSNYPE 175
Query: 128 VGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIIN 187
VGEA W + + I + +Y +++ QI + Y +N
Sbjct: 176 VGEAV----------WPGIGGKVVSVVQTIELYTAAMLYLILLTTMFSQITEKYISLSMN 225
Query: 188 ERFXXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDK--IK 245
+I L +A +SMIA L + + +TL Y + L YD+ I
Sbjct: 226 --VWAVLCAVAVLPSVFITRLSLIAWMSMIAVLALMSSIAVTLAYCI----LNYDRWSIN 279
Query: 246 DMLFKHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYIL 305
++ + +P F + F+ A V +E SMK P +++ V L
Sbjct: 280 NIPTFDGNTFPIGFGIVTFSYCAHAVFPGIEASMKHPE---NYNKMMHTSFLVSATVKTL 336
Query: 306 LGFLGYLRFGEEVQDSITLSLGDAIPAQIVKLS-IAIAVYCTFGLQFFVCIDIMWNGIKD 364
G L FG +T++L D++ + +A+ V+ +F L FV I+ +
Sbjct: 337 FGAFAVLTFGLVTDQVVTVNLADSLAFNTAATAFVALNVFFSFPLPLFVVIETFDGLLLP 396
Query: 365 KFTKRPELADY------IMRTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLIAPAMI 418
F ++Y I RT++VT + I+ VP LMG IG+F + L P +
Sbjct: 397 HFPYVGRESNYHWVWLLITRTLLVTFALFISLIVPHFGLLMGFIGSFTGTCLSFCFPCIA 456
Query: 419 EVITYWEPGVGPGKYLIWKNIL----VVIFGTFSLVFG 452
+ W KYL W +IL +++FG + VFG
Sbjct: 457 HLKLKW-------KYLRWYHILGELVLIVFGVVAGVFG 487
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 83.0 bits (196), Expect = 5e-16
Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 34/425 (8%)
Query: 51 KLDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 110
K + T + ++ A++GTGILAMP + G G+ ++VA++ + IL+ C
Sbjct: 21 KEENETHSFQAFFNIFNANMGTGILAMPYVIRLTGYW-GVAIVILVALLGNYTGKILIHC 79
Query: 111 AHVLYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVII 170
H + + ++A++GEA W R+ + I+ F F C+++ +I+
Sbjct: 80 LHENTPEGHFNKFTYADLGEAF----------WPKYGRLMVHITNFFEQFSHCTLF-LIM 128
Query: 171 ARNILQIIQFYCGDIINERFXXXXXXXXXXXMAWIRNLKYLAPVSMIANLF-MAVGLGIT 229
++ + I+E A++R +K+++ +S++ + M +
Sbjct: 129 CGTVMH--HTFPDSGISESLWICIVSFAVVPCAFVRTMKHISHISILTVIVSMGSSTCVL 186
Query: 230 LYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGIC 289
Y L + + F+H S ++T + + +E SMK P +
Sbjct: 187 GYSLYHHDDWKTHNLTSFNFRHMSIAMGIVTVTF---SSTAYLPAIERSMKYPAEFNAM- 242
Query: 290 GVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSLGDAIPAQIVKLSIAIAVYCTFGL 349
+N + VT++ G L Y FG+ + +TLSL + + I + +
Sbjct: 243 --MNFTYTLVTIIKYNYGILVYFAFGKHTEQLMTLSLPLGPFRTALDFLVIITALLFYVV 300
Query: 350 QFFVCIDIMWNGIKDKFTKR---PELADY-------IMRTIMVTVCVSIAAAVPQISPLM 399
F DI N + ++ L Y + R V V + +A VP LM
Sbjct: 301 PMFTLYDIFENQLDIPLLRKVGDQPLKCYNGCTPKLVFRFGFVVVSMVVAIFVPHFGLLM 360
Query: 400 GVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGTFSLVFGTKDAILA 459
+G F SIL I P M V + + P Y I ++ +++FG + + G + +
Sbjct: 361 AFVGGFTGSILVYIFPCMFHVKLHHK--TLPW-YYIALDVAIIVFGAVACLCGVVFSGIQ 417
Query: 460 ILKDF 464
I K++
Sbjct: 418 IAKEY 422
>SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 76.2 bits (179), Expect = 5e-14
Identities = 86/396 (21%), Positives = 167/396 (42%), Gaps = 26/396 (6%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV-LYKKTKKTQMSFAEVG 129
GTG LA+P A GL + F V ++ + SY+L++C + K K+ S+ ++
Sbjct: 3 GTGFLALPYAVARGGLAGALSFA-FVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 61
Query: 130 EAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINER 189
+AA W A + I L I + + Y +++A ++L ++ G I+ +
Sbjct: 62 QAA----------WLPAGGT-VSILLIINWLNLMTGY-LVVASSLLVDVEIP-GLILTQS 108
Query: 190 FXXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLF 249
+ ++LK +A VS I+N+ + + I L V + +D + + F
Sbjct: 109 SWAALAGVCVFPALFCKSLKSMAWVSCISNITLIISFIIVLISEV-SNYAAWD-FRTLFF 166
Query: 250 KHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFL 309
++ +F+ VV+ +E SM T R+ VL S V L
Sbjct: 167 WDTRGVLFSINIIVFSYSIQAVVIDIEESM-THRSRFN--WVLTMTYSAACAVKTLFAVF 223
Query: 310 GYLRFGEEVQDSITLSLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKR 369
G+L F + + L++ IP IV + I+V T+ L + I+ + NG +
Sbjct: 224 GFLSFKQNTNQVVILNIPHGIPRIIVITAFVISVLSTYPLPAHMLINTLQNGKLGELANA 283
Query: 370 PELAD----YIMRTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWE 425
++ + R+++V V A +P + L + G+ + L P ++ + +
Sbjct: 284 SDITSRLFPFFARSVLVVSTVIAAICIPHYALLTSLSGSIVSYAVCLFFPPVLHLGLKLD 343
Query: 426 PGVGPGKYLIWKNILVVIFGTFSLVFGTKDAILAIL 461
G+ ++ ++ +I ++F G AI I+
Sbjct: 344 QGM--PRWQMFADIFCIMFAILGSSLGCFAAIETII 377
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 74.1 bits (174), Expect = 2e-13
Identities = 77/362 (21%), Positives = 155/362 (42%), Gaps = 22/362 (6%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMSFAEVGE 130
GTG L +P + + G GI +I+A VC +L++C + K T K + + E
Sbjct: 431 GTGTLGIPYSVRMGGWA-GITTILILAWVCCFTGKLLIECLYSESKSTGKIKRVYTNYPE 489
Query: 131 AALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINERF 190
L P K+ N + VI + + GT +Y V++A + + F + ++
Sbjct: 490 --LGGAVWP--KFGN--HLVSVIQVCEMFGGTI-MYIVLLATLLTDL--FTTCTPLRQQH 540
Query: 191 XXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFK 250
+A++R + +A SMI+ L + Y + Q + I+++
Sbjct: 541 WAVICTYIALPLAFVRRVSVIAWASMISVFAFTCALTTIIIYTIT--QYHHMSIQNIPAF 598
Query: 251 HPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLG 310
+++P F + +F+ A V +E SM+ PR + +N +V LG L
Sbjct: 599 DFTKFPVGFGIIVFSYTAHAVFPGVEASMRNPRMYPQM---MNVAFVVAAIVKTSLGLLT 655
Query: 311 YLRFGEEVQDSITLSLGDAIPAQIVKLS-IAIAVYCTFGLQFFVCIDIMWNGIKDKFTKR 369
+ FG Q ++T+++ ++ + + I V +F + FV + + + F
Sbjct: 656 VMVFGTTTQQAVTVNIKNSTVVNYLSNGFVIINVLFSFPINLFVITETLDSKFLRFFPHM 715
Query: 370 PELADY------IMRTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEVITY 423
++Y + RT+++T+ + + VP + +G +G+F + L + P +
Sbjct: 716 DRSSEYNWAWQGLTRTLVLTLALVLVLIVPHFALFVGFVGSFTGTCLCFVLPCYFNIKLK 775
Query: 424 WE 425
W+
Sbjct: 776 WQ 777
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 73.7 bits (173), Expect = 3e-13
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 7/169 (4%)
Query: 202 MAWIRNLKYLAPVSMIANLFMAVGL-GITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFS 260
MA+IR ++ L P+S +AN+ + G G+ + L G + K+ D+ + +P FF
Sbjct: 590 MAFIRKIRKLGPISGLANIALLAGFFGLLVQILDGL----HFKLNDVTLANWITFPIFFG 645
Query: 261 LTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQD 320
A E IG ++P+E+ M + R + L+ ++ ++++ G LG+L +G +V
Sbjct: 646 QLTCAYEGIGCIIPIESGMGSNRPRFPL--YLHLTLAQLSVLLGSFGVLGFLIYGNDVPQ 703
Query: 321 SITLSLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKR 369
+T L + AQ+V++++ IAV T+ LQ F I I + + +K ++
Sbjct: 704 IVTDKLTTGLFAQLVRVTLIIAVLFTYPLQLFPVIQIAESLVFEKIRRK 752
Score = 56.0 bits (129), Expect = 6e-08
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 32 KYNMTKDAESGDFDPFTERKLDTPTS--NMDTLTHLLKASLGTGILAMPKAFKAAGLING 89
K N TK + + K PT+ ++LKA +GT LA+P AFK +GL G
Sbjct: 357 KENYTKSGDDRKTHTLSPHKCLRPTAWQQFTDFANVLKAFIGTSYLALPFAFKQSGLALG 416
Query: 90 ILFTVIVAVVCTHCSYILVKCAHV 113
I+ V++A + HC +++KC V
Sbjct: 417 IVALVLIATITDHCCQMIIKCKKV 440
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 71.7 bits (168), Expect = 1e-12
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 202 MAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSL 261
MA+IR ++ L PVS I+NL + L Y++ + ++I+ LF S +P FF
Sbjct: 534 MAFIRRVRKLGPVSFISNLALLFAFLAVLGYMLTGWTFKLNEIR--LFSW-STFPVFFGQ 590
Query: 262 TIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDS 321
A + IG ++P+E+SM R + L+ + ++ + G GYL +GE V
Sbjct: 591 VTSAYQGIGTLIPIESSMAENRHRYPL--YLHLALGLLSAILGGFGITGYLVYGENVDQI 648
Query: 322 ITLSLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKRPE 371
+T L + +V++ + +A+ T+ LQ F +I+ + + ++ +R E
Sbjct: 649 VTSELPQGLLVTVVQILLCLAILFTYPLQLFPVTEIIESYLFKEYNRRKE 698
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 68.5 bits (160), Expect = 1e-11
Identities = 95/446 (21%), Positives = 191/446 (42%), Gaps = 39/446 (8%)
Query: 22 DEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTHLLKASLGTGILAMPKAF 81
+E N+++ + N KD E D + T T + ++T+ ++ GTG LA+P A
Sbjct: 851 NENNQQEKANDSN--KDREERDANDGTN---STWRATLNTINYME----GTGFLALPYAV 901
Query: 82 KAAGLINGILFTVIVAVVCTHCSYILVKCAHV--LYKKTKKTQMSFAEVGEAALDNGPQP 139
G I G L ++V ++ + +YI V CA+ YK K+ + S AE+G+A
Sbjct: 902 SRGG-IAGALGFILVPIILAYTAYISVDCAYEGGKYKAKKRVRSSLAEIGKAV------- 953
Query: 140 LRKWANAFRIFIVISLFI-TYFGTCSVYTVIIARNILQIIQFYCGDIINERFXXXXXXXX 198
WA A I+ LFI + F T + + ++ ++L +Q I++R+
Sbjct: 954 ---WAPAEH--IIDGLFIVSLFDTLTSFN-LVCSSLLAGLQI---PSISQRYWSVIIGAV 1004
Query: 199 XXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEF 258
+I+ + L +S++ + + IT+ +D + +LF + +
Sbjct: 1005 ALPSLFIKTFRSLVWLSLLGTASLLLAF-ITVIVYEFREYKSWD-FRALLFWDFNGFLFS 1062
Query: 259 FSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEV 318
++ +F+ V+ +E SMK IC +L + +++ L LG+L F
Sbjct: 1063 LNIALFSNGIHCAVLSIEKSMKHKSQ---ICQLLAISYTSTSIIKTLFAVLGFLAFKANT 1119
Query: 319 QDSITLSLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKF--TKRPELADYI 376
+ + L++ +V ++ I+ + L + I I+ + +F ++ A +I
Sbjct: 1120 SEVVILNIPQGTMRTVVIITTVISTLSGYSLLSHLLISIIESKKIGEFIGSRLSSFAFFI 1179
Query: 377 MRTIMVTVCVSIAA-AVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLI 435
+ V + S+ A +P + + + + L PA + + + G+ K L
Sbjct: 1180 ISRFAVVIISSLTAICIPHFALWISLSACIGGYVTCLFFPAALHLGLRLDQGLPTWKLL- 1238
Query: 436 WKNILVVIFGTFSLVFGTKDAILAIL 461
+ V+F VFG A++ ++
Sbjct: 1239 -ADWFCVLFAMVGSVFGFYSAVVPVV 1263
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 66.9 bits (156), Expect = 3e-11
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMSFAEVGE 130
GTGIL +P A + G G+ V+VA VC +LV C LY+++K+T V E
Sbjct: 125 GTGILGVPYAVRMGGWA-GVAAIVVVAWVCCFTGKLLVDC---LYEESKRTGQR-KRVRE 179
Query: 131 AALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINERF 190
D G W N +I V+ + Y G +Y V++A +++ + ++
Sbjct: 180 NYPDVGEATWPGWGN--KIVSVVQVCEMYGGIV-MYIVLLATIFYDMLKDFAP--LDIYM 234
Query: 191 XXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFK 250
+ +I + +A +SM++ + GL + Y + ++++
Sbjct: 235 WAVACAVVALPLIFITRVSVIAWISMMSVFALLSGLLAIIIYCFT--EFDRMSLRNIPVF 292
Query: 251 HPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLG 310
PS +P F + +F+ A V +E SM+ P+ + +N + +LLG L
Sbjct: 293 EPSTFPIGFGIIVFSYCAHAVFPGVEGSMQDPQKFPLM---MNTSFTLAAFNKVLLGLLA 349
Query: 311 YLRFGEEVQDSITLSLG 327
LRFG++ + +T+++G
Sbjct: 350 VLRFGDQTEQVVTVNMG 366
>SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 66.9 bits (156), Expect = 3e-11
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 202 MAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSL 261
+++I +L+ L+ +S +AN+ +GL IT YL G+ ++ F + P FF +
Sbjct: 128 LSYIHSLRVLSVLSTMANICCLIGLVITFQYL---GRNVHNPKLLPEFDGWAALPLFFGM 184
Query: 262 TIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRF 314
+F E IGVV+PLEN M P+ VLN GM + ++ L+G LGYL F
Sbjct: 185 VVFTFEGIGVVLPLENQMARPQHFR---LVLNVGMGIILAIFYLMGVLGYLAF 234
Score = 52.8 bits (121), Expect = 6e-07
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 335 VKLSIAIAVYCTFG----LQFFVCIDIMWNGIKDKFTKRPE-LADYIMRTIMVTVCVSIA 389
V + I +A++ G L F ++IM I+ +R +ADY RT++V V ++A
Sbjct: 214 VGMGIILAIFYLMGVLGYLAFLRPMEIMQPPIRQCVGERFHGIADYGFRTLLVCVTCALA 273
Query: 390 AAVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGTFSL 449
+PQ+S + ++G+ S L L+ P I ++T + +I K++ ++ FG
Sbjct: 274 LGIPQLSNFISLVGSIGSSALALVFPITIHLLTLYSTHQLTISVII-KDVFILAFGLLGS 332
Query: 450 VFGTKDAILAILK 462
V G +IL I++
Sbjct: 333 VVGLYTSILNIVR 345
Score = 46.0 bits (104), Expect = 6e-05
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 17 TFISPDEKNKEK-IVSKYNMTKDAESGDFDPFTERKLD--TPTSNMDTLTHLLKASLGTG 73
+ I+ E +K + + + +++ +A++G +R L PTS TLTH+LKA++G G
Sbjct: 31 SLINDSENDKRRYLAAGGSLSLNADAGGSLSIIDRTLHLKNPTSEWQTLTHILKANIGPG 90
Query: 74 ILAMPKAFKAAGLI 87
+L++P A AG++
Sbjct: 91 MLSLPAAMMNAGIV 104
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 58.8 bits (136), Expect = 9e-09
Identities = 78/385 (20%), Positives = 151/385 (39%), Gaps = 30/385 (7%)
Query: 73 GILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMSFAEVGEAA 132
G+L +P A G + V+V ++ + +L+ C + + K++ + E A
Sbjct: 167 GVLGIPFAVSQGGFA-ALAVIVLVGLMTLYTGVVLIDCMYEVSPKSRLRKRVRGSYAEIA 225
Query: 133 LDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYC--GDIINERF 190
D W + + + TC V +++ + ++ + G +NE +
Sbjct: 226 AD-------AWGPVGGVIVDFMTVAFCYCTCVVLFMMLGNTVFSFLKSFMTLGFGLNECY 278
Query: 191 XXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFK 250
+ I L LA +SM+A L + L I + Y + + Q KI ++
Sbjct: 279 LICAALLVPLVL--IHQLTVLAWLSMLAVLSLITCLFIIIGYSLQ--EWQSWKIHNIPDF 334
Query: 251 HPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLG 310
+ +P + +F+ V +E+SM+ PR I + VTL + +G L
Sbjct: 335 DINNFPVAIGIIVFSYCGHSVFPGIESSMRKPRKFKKIACT---SFTSVTLCKVAIGLLC 391
Query: 311 YLRFGEEVQDSITLSL----GDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKF 366
L +G ITL++ + + + + I + Y +F L FV + + K
Sbjct: 392 CLLYGPHTLPLITLNIQSEAKNVVMRSFMAVFIIVNTYFSFPLNIFVASETLDLIALPKL 451
Query: 367 TK------RPELADYIMRTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEV 420
+ + + RT +V IA A+P + LM + G+ + + I P + +
Sbjct: 452 PSCSVNKLKRAIWKLLTRTTLVLSTCGIAVAIPHLGLLMSIFGSLLGACISFILPCALHL 511
Query: 421 ITYWEPGVGPGKYLIWKNILVVIFG 445
+ Y + +LV+IFG
Sbjct: 512 TLKRDQ---LRCYQVVLEVLVIIFG 533
>SB_31832| Best HMM Match : FtsX (HMM E-Value=2.8)
Length = 186
Score = 58.4 bits (135), Expect = 1e-08
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 354 CIDIMWNGIKDKFTKRPELADYIMRTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLI 413
C+ + K FTK+ Y++R + V + V+IA VP+ S LM +IG+ L L+
Sbjct: 74 CLPRCFPDEKTPFTKQERGVVYLLRAVFVVLTVAIAVFVPEFSLLMAIIGSISGVFLTLV 133
Query: 414 APAMIEVITYWEPGVGPGKYLIWKNILVVIFGTFSLVFGTKDAILAILK 462
P + +I + E + +Y++ NIL+V G S FG +++A++K
Sbjct: 134 FPPLFYIILHLE-HISSKQYVV--NILIVCVGVLSGGFGLVFSVIALMK 179
>SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35)
Length = 436
Score = 52.0 bits (119), Expect = 1e-06
Identities = 76/414 (18%), Positives = 171/414 (41%), Gaps = 26/414 (6%)
Query: 53 DTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAH 112
D TS + + G+G +A+P A GL + F ++V ++ T+ ++I+V C +
Sbjct: 40 DGTTSTWRATLNTINYMEGSGFVALPYAVARGGLAGALGF-ILVPIIFTYTAHIMVDCLY 98
Query: 113 V--LYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVII 170
Y + K+ + S+ E+ A W A + + +F ++F + Y ++
Sbjct: 99 EGGRYTEKKRVRSSYEEIATAV----------WPPAGYMLNTLFVF-SFFDHLTSYN-LV 146
Query: 171 ARNILQIIQFYCGDIINERFXXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITL 230
+ ++L +Q G I++R+ +I+ + +A +S++A + + L +T+
Sbjct: 147 SSSLLAGLQ-TPGVDISQRYWSIIIGAVVLPTLFIKTFRSIAWLSLLATAALLLAL-LTV 204
Query: 231 YYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICG 290
+D +LF + +++ F+ V+ E SM ++ +
Sbjct: 205 IVYDFHNYKSWD-FNSLLFWDLQGFLLAINISAFSNGIHASVISFEKSM-LHKSQFSL-- 260
Query: 291 VLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSLGDAIPAQIVKLSIAIAVYCTFGLQ 350
L + ++ LG+L F + + L++ +V ++ ++ + L
Sbjct: 261 ALAISYTSTCIIKTAFAVLGFLAFKANTSEVVILNIPQGTMRTVVTITTVVSTMSGYPLV 320
Query: 351 FFVCIDIMWNGIKDKF--TKRPELADYIMRTIMVTVCVSIAA-AVPQISPLMGVIGAFCF 407
+ I I+ +F + LA +++ + + V ++AA +P + + G+
Sbjct: 321 VQLLISIIEKRKIGEFLSARLSPLAFFVISRVAIVVITTLAAICIPHFALWTSLGGSVVS 380
Query: 408 SILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGTFSLVFGTKDAILAIL 461
L L PA + + + G+ + L + V+F V G A+ AI+
Sbjct: 381 YALSLFFPAALHLGLRLDQGLPTWQLL--ADWFCVVFAMAGSVLGVYSAVKAIV 432
>SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 703
Score = 47.2 bits (107), Expect = 3e-05
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 19/227 (8%)
Query: 208 LKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEF---FSLTIF 264
L LA VS ++ F+ V +G +Y V + + D+ P +F + +
Sbjct: 106 LASLADVSWVS--FLTVLIGEVIYITVFLYSCYHHERWDVASLPPFAIKKFGAAVGIVVV 163
Query: 265 AMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITL 324
+ + + +E SM+ P V+N VT V + GF+GYL F + IT
Sbjct: 164 SYSSQPYMPAIEGSMQRPH---NFNNVMNVTYIAVTFVKVFFGFIGYLTFTRDTDQVITN 220
Query: 325 SLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWN-----GIKD--KFTKRPELADYIM 377
+L + + +V L + ++ + + DI+ N G + K + Y
Sbjct: 221 NLPEGVLHMVVNLLVLFLAATSYTIPVYTVFDILENISFPCGRMEHPSSAKGKDKLSYFQ 280
Query: 378 ----RTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEV 420
R +++ + + VP M ++G+F L I PA +
Sbjct: 281 ALTARLCVISFTLLVGVLVPHFGLYMALVGSFTGMCLAFIFPAFFHM 327
>SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35)
Length = 742
Score = 44.8 bits (101), Expect = 1e-04
Identities = 58/315 (18%), Positives = 131/315 (41%), Gaps = 13/315 (4%)
Query: 151 IVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINERFXXXXXXXXXXXMAWIRNLKY 210
+ I L I + + Y +++A ++L ++ G I+ + + ++LK
Sbjct: 433 VSILLIINWLNLMTGY-LVVASSLLVDVEIP-GLILTQSSWAALAGVCVFPALFCKSLKS 490
Query: 211 LAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTIFAMEAIG 270
+A VS I+N+ + + I + + +D + + F ++ +F+
Sbjct: 491 MAWVSCISNITLIISF-IAVLISELSNYATWD-FRTLFFWDTRGVLFSINIIVFSYSIQA 548
Query: 271 VVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSLGDAI 330
VV+ +E SM T R+ VL S +V L G+L F + + L++ I
Sbjct: 549 VVIDIEESM-THRSRFN--WVLTMTYSASCVVKTLFAVFGFLSFKKNTNQVVILNIPHGI 605
Query: 331 PAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKRPELAD----YIMRTIMVTVCV 386
P + ++ I+V T+ + + I+ + +G + ++ + R+++V V
Sbjct: 606 PRIVGIIAFVISVLSTYPVPAHMLINTLQSGRLGELANASDITSRLFPFFARSVLVISTV 665
Query: 387 SIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGT 446
A +P + L + G+ + L P ++ + + G+ ++ ++ +I ++F
Sbjct: 666 IAAICIPHYALLTSLSGSIVSYAICLFFPPVLHLGLKLDQGM--PRWQMFADIFCIMFAI 723
Query: 447 FSLVFGTKDAILAIL 461
G AI I+
Sbjct: 724 VGSSLGCFAAIETII 738
>SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 44.8 bits (101), Expect = 1e-04
Identities = 58/315 (18%), Positives = 131/315 (41%), Gaps = 13/315 (4%)
Query: 151 IVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINERFXXXXXXXXXXXMAWIRNLKY 210
+ I L I + + Y +++A ++L ++ G I+ + + ++LK
Sbjct: 1083 VSILLIINWLNLMTGY-LVVASSLLVDVEIP-GLILTQSSWAALAGVCVFPALFCKSLKS 1140
Query: 211 LAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTIFAMEAIG 270
+A VS I+N+ + + I + + +D + + F ++ +F+
Sbjct: 1141 MAWVSCISNITLIISF-IAVLISELSNYATWD-FRTLFFWDTRGVLFSINIIVFSYSIQA 1198
Query: 271 VVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSLGDAI 330
VV+ +E SM T R+ VL S +V L G+L F + + L++ I
Sbjct: 1199 VVIDIEESM-THRSRFN--WVLTMTYSASCVVKTLFAVFGFLSFKKNTNQVVILNIPHGI 1255
Query: 331 PAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKRPELAD----YIMRTIMVTVCV 386
P + ++ I+V T+ + + I+ + +G + ++ + R+++V V
Sbjct: 1256 PRIVGIIAFVISVLSTYPVPAHMLINTLQSGRLGELANASDITSRLFPFFARSVLVISTV 1315
Query: 387 SIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGT 446
A +P + L + G+ + L P ++ + + G+ ++ ++ +I ++F
Sbjct: 1316 IAAICIPHYALLTSLSGSIVSYAICLFFPPVLHLGLKLDQGM--PRWQMFADIFCIMFAI 1373
Query: 447 FSLVFGTKDAILAIL 461
G AI I+
Sbjct: 1374 VGSSLGCFAAIETII 1388
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV-LYKKTKKTQMSFAEVG 129
GTG LA+P A GL + F V ++ + SY+L++C + K K+ S+ ++
Sbjct: 49 GTGFLALPYAVSRGGLAGALSF-AFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 107
Query: 130 EAA 132
+AA
Sbjct: 108 QAA 110
>SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 163
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV-LYKKTKKTQMSFAEVG 129
GTG LA+P A GL + F V ++ + SY+L++C + K K+ S+ ++
Sbjct: 34 GTGFLALPYAVARGGLAGALSF-AFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 92
Query: 130 EAA 132
+AA
Sbjct: 93 QAA 95
>SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 178
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV-LYKKTKKTQMSFAEVG 129
GTG LA+P A GL + F V ++ + SY+L++C + K K+ S+ ++
Sbjct: 49 GTGFLALPYAVARGGLAGALSF-AFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 107
Query: 130 EAA 132
+AA
Sbjct: 108 QAA 110
>SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 71 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV-LYKKTKKTQMSFAEVG 129
GTG LA+P A GL + F V ++ + SY+L++C + K K+ S+ ++
Sbjct: 49 GTGFLALPYAVARGGLAGALSF-AFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 107
Query: 130 EAA 132
+AA
Sbjct: 108 QAA 110
>SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018)
Length = 288
Score = 35.9 bits (79), Expect = 0.069
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 31 SKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGI 90
S YN E GD + E+ S +L+ GTG+L +P A + G+I +
Sbjct: 36 SDYNPGVTDEEGDEESDAEKG---GCSLWHAFWNLVNVIEGTGVLGLPYAVREGGII-VV 91
Query: 91 LFTVIVAVVCTHCSYILVKCAHVLYKKTKK 120
L +I+AV+ + IL+ C LY K K
Sbjct: 92 LGLIILAVISNYTGQILIGC---LYTKDPK 118
>SB_55843| Best HMM Match : Aa_trans (HMM E-Value=0.00091)
Length = 281
Score = 35.1 bits (77), Expect = 0.12
Identities = 49/263 (18%), Positives = 112/263 (42%), Gaps = 20/263 (7%)
Query: 62 LTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKT 121
+ +L+ A + L + F G + ++ V V VC + IL++C + + K+
Sbjct: 1 MVNLVNARMPAFSLLLLPYFIQQGGVMAVIALVFVPCVCVYTGKILIECLYDT-ENHKRV 59
Query: 122 QMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFY 181
+ ++ ++GEA L ++ + + LF+ +FG A + ++ +
Sbjct: 60 RDTYKDIGEAVWPKYGGILVTVTQVIQLVLPLCLFL-HFG---------ANALSHVVPNF 109
Query: 182 CGDIINERFXXXXXXXXXXXMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQY 241
+ + + +++ L ++ VS+ A +F+ V L +T+ Y G +++
Sbjct: 110 ---PVTQELLTVAAALLCLPLVYLKTLARVSWVSLTAVVFLLVAL-LTVLYYCGL-MIEH 164
Query: 242 DK-IKDMLFKHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVT 300
K + L +W SLTI ++ + V+P S + R+ L+ +S T
Sbjct: 165 KKWTMEELNIWNFQW-VLMSLTIASVTSTHGVLPTLESTLSDRSKFNRILGLSYALSQFT 223
Query: 301 LVYILLGFLGYLRFGEEVQDSIT 323
+ + + + F + +++ IT
Sbjct: 224 M--LTFSLIAFFAFRQNLENLIT 244
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 33.9 bits (74), Expect = 0.28
Identities = 12/50 (24%), Positives = 28/50 (56%)
Query: 59 MDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILV 108
+ ++ L+ +G G+L++P AF+ G + L + V + TH ++++
Sbjct: 233 LSSIFTLVSTMIGGGVLSLPFAFQQGGFVMSSLVLIFVLMASTHGGFLII 282
>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
Length = 956
Score = 32.7 bits (71), Expect = 0.64
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 65 LLKASLGTGILAMPKAF-KAAGLINGILFTVIVAVVCTHCSYILVKCAHV 113
++ A++G GIL P+AF KA G+ + +++ V T I+ CA++
Sbjct: 317 VMNAAMGAGILNFPQAFGKAGGITAAMSIELVMLVFITGSFVIMAYCANM 366
>SB_21462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 32.3 bits (70), Expect = 0.85
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 116 KKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVI 169
K+ K+TQ S +E E N P + W + R I++SL YF +C+ ++++
Sbjct: 16 KEFKRTQRSASESTEV---NAPAE-KLWGSTRRKLILVSLCFVYFSSCASFSIL 65
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 16 ETFISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTHLLK 67
E IS EKN EKIVS+ + +S D TE+ L S +TH +K
Sbjct: 131 EEIISTSEKNTEKIVSELSAEVTRKS---DSNTEKILSAIASQSPIITHFIK 179
>SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 24 KNKEKIVSKYNM-TKDAESGDFDPFTERKLDTPTSNMDTLTHL 65
KNK + +++ TK+A D DP T+ KL + +N + +TH+
Sbjct: 446 KNKRSMSQRFSWKTKEAGLQDLDPDTKSKLISAPTNFNHITHM 488
>SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02)
Length = 385
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 65 LLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVK 109
L G GILA+P + AG+I+G + IVA + + L++
Sbjct: 21 LFNVLTGVGILALPSSIAKAGIISGSICLTIVAFMAFVSATFLIE 65
>SB_45928| Best HMM Match : Uso1_p115_C (HMM E-Value=0.54)
Length = 500
Score = 30.3 bits (65), Expect = 3.4
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 1 MVNEPNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKL 52
+V E N IP QE +EK+ + I+SK ++TK+AE + P + KL
Sbjct: 32 LVKESNQNIPETQEARG-AEGNEKD-DPIISKASLTKEAEKAEAKPEPKSKL 81
>SB_4982| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-21)
Length = 217
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 102 HCSYILVKC-AHVLYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYF 160
H YIL+ + T + S GE ++ P+ W A+ F+ SL++
Sbjct: 135 HAVYILIGIWIAAILVATPMLKFSEVREGEGCIEPWPKSDFPWHLAYFAFVFFSLYLIPL 194
Query: 161 GTCSVYTVIIARNI 174
G+ SV +I N+
Sbjct: 195 GSMSVLYFMIYYNL 208
>SB_1637| Best HMM Match : Ion_trans (HMM E-Value=7.6e-10)
Length = 216
Score = 29.1 bits (62), Expect = 7.9
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 211 LAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTIF-AMEAI 269
L V+++ NL+ + +G L L+ G QY + F +++ ++ +F A +
Sbjct: 26 LGYVAVVFNLYRTMAVGDLLSSLLEDGS-QYANFDSLGFWQ-TQFNNMVAVAVFFAWIKV 83
Query: 270 GVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGF----LGYLRFGEEVQDSIT 323
+ +M + L C K ++G +++ ++ F LGYL FG +V+D T
Sbjct: 84 FKYISFNKTMTQLSSTLSKCA---KDVAGFAIMFFIIFFAYAQLGYLIFGTQVRDFST 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.327 0.142 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,470
Number of Sequences: 59808
Number of extensions: 537868
Number of successful extensions: 1507
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1449
Number of HSP's gapped (non-prelim): 43
length of query: 464
length of database: 16,821,457
effective HSP length: 85
effective length of query: 379
effective length of database: 11,737,777
effective search space: 4448617483
effective search space used: 4448617483
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 62 (29.1 bits)
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