Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000713-TA|BGIBMGA000713-PA|undefined
(148 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 29 1.0
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 29 1.8
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 29 1.8
U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated k... 27 5.5
U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated k... 27 5.5
U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated k... 27 5.5
AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated... 27 5.5
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 7.3
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 7.3
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.3
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.3
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.3
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.3
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 26 9.6
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 26 9.6
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 26 9.6
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 26 9.6
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 26 9.6
Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical p... 26 9.6
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 26 9.6
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 26 9.6
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 26 9.6
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 26 9.6
U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormon... 26 9.6
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 26 9.6
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 26 9.6
AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear recep... 26 9.6
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCCVPC 128
P AP + P T I CEE+D+P C PC
Sbjct: 113 PGAPGR--PGTPGRPPIVCEEQDVPPCNPC 140
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 97 ITPRAPAKMKPATHCCKLIQCEEEDIPCCVPCRTC 131
+ P+A MK C +I CE+ + C+TC
Sbjct: 291 VVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTC 325
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 97 ITPRAPAKMKPATHCCKLIQCEEEDIPCCVPCRTC 131
+ P+A MK C +I CE+ + C+TC
Sbjct: 291 VVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTC 325
>U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform c protein.
Length = 562
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 31 ALNSELTYSKKEAHETLCNVCNVTPKDAPKGVQAQKVL 68
A++ E + K E H+ C+VTP +P G + + +
Sbjct: 510 AMSMEASIEKMEVHDFSDMSCDVTPPPSPGGAKLSQTM 547
>U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform a protein.
Length = 624
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 31 ALNSELTYSKKEAHETLCNVCNVTPKDAPKGVQAQKVL 68
A++ E + K E H+ C+VTP +P G + + +
Sbjct: 572 AMSMEASIEKMEVHDFSDMSCDVTPPPSPGGAKLSQTM 609
>U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform b protein.
Length = 626
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 31 ALNSELTYSKKEAHETLCNVCNVTPKDAPKGVQAQKVL 68
A++ E + K E H+ C+VTP +P G + + +
Sbjct: 574 AMSMEASIEKMEVHDFSDMSCDVTPPPSPGGAKLSQTM 611
>AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated
protein kinase alphasubunit 1 protein.
Length = 624
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 31 ALNSELTYSKKEAHETLCNVCNVTPKDAPKGVQAQKVL 68
A++ E + K E H+ C+VTP +P G + + +
Sbjct: 572 AMSMEASIEKMEVHDFSDMSCDVTPPPSPGGAKLSQTM 609
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCC 125
P APA + T C + QC+++ IP C
Sbjct: 284 PSAPACQQCQTSCQQTQQCQQQCIPQC 310
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCC 125
P APA + T C + QC+++ IP C
Sbjct: 285 PSAPACQQCQTSCQQTQQCQQQCIPQC 311
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCC 125
P APA + T C + QC+++ IP C
Sbjct: 200 PSAPACQQCQTSCQQTQQCQQQCIPQC 226
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCC 125
P APA + T C + QC+++ IP C
Sbjct: 200 PSAPACQQCQTSCQQTQQCQQQCIPQC 226
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCC 125
P APA + T C + QC+++ IP C
Sbjct: 200 PSAPACQQCQTSCQQTQQCQQQCIPQC 226
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 99 PRAPAKMKPATHCCKLIQCEEEDIPCC 125
P APA + T C + QC+++ IP C
Sbjct: 200 PSAPACQQCQTSCQQTQQCQQQCIPQC 226
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 374 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 421
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 411 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 458
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 411 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 458
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 319 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 366
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 374 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 421
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 411 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 458
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 411 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 458
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 319 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 366
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 241 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 288
>Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical
protein F25H5.1d protein.
Length = 258
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 45 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 92
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 5 PYEEIGAIFNGNEIPDDICEALTNRTALNS 34
PY+ + A FNG+ PDD+ R A +S
Sbjct: 3782 PYDVLTATFNGSYYPDDMVLHFFERFAQSS 3811
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 5 PYEEIGAIFNGNEIPDDICEALTNRTALNS 34
PY+ + A FNG+ PDD+ R A +S
Sbjct: 3793 PYDVLTATFNGSYYPDDMVLHFFERFAQSS 3822
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 5 PYEEIGAIFNGNEIPDDICEALTNRTALNS 34
PY+ + A FNG+ PDD+ R A +S
Sbjct: 3793 PYDVLTATFNGSYYPDDMVLHFFERFAQSS 3822
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 16 NEIPDDICEALTNRTALNSELTYSK-KEAHETLCNVCNVTPKDAPKGVQA 64
+++P D CEAL + A ++ +K E E + CN + + K +A
Sbjct: 580 DQLPKDECEALRTKIADTKKILDNKDNETPEAIKEACNTLQQQSLKLFEA 629
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 115 IQCEEEDIPCCVPC 128
I+ EEED PCC+ C
Sbjct: 28 IKAEEEDGPCCLVC 41
>U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform a protein.
Length = 429
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 115 IQCEEEDIPCCVPC 128
I+ EEED PCC+ C
Sbjct: 28 IKAEEEDGPCCLVC 41
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 23 CEALTNRTALNS-ELTYSKKEAHET--LCNVCNVTPKDAPKGVQAQKV 67
C+ ++S +L+Y K HE LC++C ++ D P G + ++
Sbjct: 411 CDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMPFGSKNDRI 458
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 5 PYEEIGAIFNGNEIPDDICEALTNRTALNS 34
PY+ + A FNG+ PDD+ R A +S
Sbjct: 3793 PYDVLTATFNGSYYPDDMVLHFFERFAQSS 3822
>AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear receptor
NHR-105 protein.
Length = 429
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 115 IQCEEEDIPCCVPC 128
I+ EEED PCC+ C
Sbjct: 28 IKAEEEDGPCCLVC 41
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,777,178
Number of Sequences: 27539
Number of extensions: 159741
Number of successful extensions: 389
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 34
length of query: 148
length of database: 12,573,161
effective HSP length: 75
effective length of query: 73
effective length of database: 10,507,736
effective search space: 767064728
effective search space used: 767064728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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