GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000712-TA|BGIBMGA000712-PA|undefined
         (791 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    29   0.63 
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           25   5.9  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    25   5.9  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    25   7.7  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    25   7.7  
AJ000035-1|CAA03871.1|  156|Anopheles gambiae D7r3 protein protein.    25   7.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 28.7 bits (61), Expect = 0.63
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 420 CAMQCPYTKGADGGPCEPPCGKNQISLALPSEAICCHGAQPAGTQFTCTTEGCMQTSKHG 479
           C  +CP     D G C   C K +  +   SE + C G  P     TC  EG + +   G
Sbjct: 261 CVRKCPEHLLKDNGACVRKCPKGK--MPQNSECVPCKGVCPK----TCPGEGIVHSDNIG 314


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 25.4 bits (53), Expect = 5.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 157 ICDDDPGACVVKSGGPFVKTFNSG 180
           +CDDD GA VV +G    K   +G
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAG 24


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 5.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 233 QARKKFLEDPSNVSYEALKDAFRIVGSDG 261
           Q R K  +D   V+    K+ FR+ G+DG
Sbjct: 378 QPRIKLSQDVGKVTMPGSKNVFRLYGADG 406


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 183 CLFSLKEADINKAMSKFPIKVTV-YKSLPCGCLPTKIVMGEATIDMTKEFVQARKKFLED 241
           CLFSL +A   + + +    +    K   C       V G+  +D   + V     F+ED
Sbjct: 14  CLFSLGQARQEETVEECERNIPASLKERVCELRQYTPVQGK-DMDSHMQCVLEVLGFVED 72

Query: 242 PSNVSYEALKDAFRIVGSDGVEAGEI 267
              + ++ L    ++V  DG  AG +
Sbjct: 73  NGELVFQELLGVLKMVDPDGDHAGSM 98


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 183 CLFSLKEADINKAMSKFPIKVTV-YKSLPCGCLPTKIVMGEATIDMTKEFVQARKKFLED 241
           CLFSL +A   + + +    +    K   C       V G+  +D   + V     F+ED
Sbjct: 14  CLFSLGQARQEETVEECERNIPASLKERVCELRQYTPVQGK-DMDSHMQCVLEVLGFVED 72

Query: 242 PSNVSYEALKDAFRIVGSDGVEAGEI 267
              + ++ L    ++V  DG  AG +
Sbjct: 73  NGELVFQELLGVLKMVDPDGDHAGSM 98


>AJ000035-1|CAA03871.1|  156|Anopheles gambiae D7r3 protein protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 183 CLFSLKEADINKAMSKFPIKVTV-YKSLPCGCLPTKIVMGEATIDMTKEFVQARKKFLED 241
           CLFSL +A   + + +    +    K   C       V G+  +D   + V     F+ED
Sbjct: 14  CLFSLGQARQEETVEECERNIPASLKERVCELRQYTPVQGK-DMDSHMQCVLEVLGFVED 72

Query: 242 PSNVSYEALKDAFRIVGSDGVEAGEI 267
              + ++ L    ++V  DG  AG +
Sbjct: 73  NGELVFQELLGVLKMVDPDGDHAGSM 98


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,636
Number of Sequences: 2123
Number of extensions: 34785
Number of successful extensions: 111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 109
Number of HSP's gapped (non-prelim): 7
length of query: 791
length of database: 516,269
effective HSP length: 69
effective length of query: 722
effective length of database: 369,782
effective search space: 266982604
effective search space used: 266982604
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)