GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000711-TA|BGIBMGA000711-PA|IPR001478|PDZ/DHR/GLGF,
IPR011511|Variant SH3, IPR008144|Guanylate kinase, IPR001452|Src
homology-3, IPR008145|Guanylate kinase/L-type calcium channel region
         (421 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 193 DFDRELIPTYEEVARLYPRPG 213
           DF RE  P  +  A LY RPG
Sbjct: 366 DFHREREPVADHHANLYSRPG 386


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 178 IPKVKKIIYDITENDDFDRELIP 200
           +P+  K IY+I  N ++D   +P
Sbjct: 51  VPEALKKIYNIQNNFEYDTASLP 73


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,511
Number of Sequences: 317
Number of extensions: 3814
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 421
length of database: 114,650
effective HSP length: 59
effective length of query: 362
effective length of database: 95,947
effective search space: 34732814
effective search space used: 34732814
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)