Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000711-TA|BGIBMGA000711-PA|IPR001478|PDZ/DHR/GLGF,
IPR011511|Variant SH3, IPR008144|Guanylate kinase, IPR001452|Src
homology-3, IPR008145|Guanylate kinase/L-type calcium channel region
(421 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 89 1e-18
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 31 0.23
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 30 0.70
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 30 0.70
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 29 1.2
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 1.6
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 29 1.6
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 28 2.1
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 27 3.7
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 27 3.7
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 27 3.7
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 27 4.9
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 88.6 bits (210), Expect = 1e-18
Identities = 52/187 (27%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 215 VRPIVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPIKSSEQNGKDYVFVTREKMEQ 274
++P+V+ G GVG++ L +RL+ +K + +T+R ++ E++G DY FVT+E+ ++
Sbjct: 18 LKPVVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDGIDYHFVTKEEFQK 77
Query: 275 DITDGKFIEHGEYKGNLYGTAAESVETIINTGRVCVLSPHWQALKMLRTPRLRPYIVFIK 334
+ + KF+E + GN+YGT+ +++ + + +L Q + ++ + VF+
Sbjct: 78 LVAEEKFVEWAVFSGNMYGTSIMAIQELEAVNKKAILDIDLQGVLQVKASPIDAQYVFLA 137
Query: 335 PPSLERMVETRTAANARSTFDKESSRAFTEEEFTDIIRSSNRINFLYGYMFDEEVVNEDL 394
PPS+E++ E R R T ++ + E +I S N FD +VN+D+
Sbjct: 138 PPSIEQL-EVR--LRGRGTENESAILQRLERARAEIEYSEKPGN------FDALIVNDDV 188
Query: 395 ASAVSQL 401
A QL
Sbjct: 189 EKAYKQL 195
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 31.5 bits (68), Expect = 0.23
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
Query: 64 RVRALFDYNSSEDPYIPCKEAGLDFKKGDILHIVSQDDAYWWQ 106
RVRAL+D+ ++E + L FKKGDI+ ++ WW+
Sbjct: 219 RVRALYDFAATE-------QGELSFKKGDIILVLESVYKDWWK 254
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 29.9 bits (64), Expect = 0.70
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 65 VRALFDYNSSEDPYIPCKEAGLDFKKGDILHIVSQDDAYWWQARREGDRVMRAGLIPSRA 124
V AL+DY+++ IP + + F+KGD + ++ + WW+ G+ G PS
Sbjct: 612 VSALYDYDAA----IPEE---ISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNF 664
Query: 125 LQE 127
++E
Sbjct: 665 VRE 667
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 29.9 bits (64), Expect = 0.70
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 80 PCKEAGLDFKKGDILHIVSQDDAYWWQARREG-DRVM--RAGLIPS 122
P E L KKGD+L ++ + D WW + G D V G+ PS
Sbjct: 434 PETENELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGNTGMFPS 479
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 65 VRALFDYNSSEDPYIPCKEAGLDFKKGDILHIVSQDDAYWWQARREGDRVMRAGLIPSRA 124
VRAL+ Y ++ +P + +D D L ++++ WW+ V R GL PS
Sbjct: 357 VRALYAYKAT----LPSE---IDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNY 409
Query: 125 LQE 127
++E
Sbjct: 410 IEE 412
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 167 PTATALLPCKSIPKVKKIIYDITENDDFDRELIPTYEEVARLY-----PRPGLVRP 217
P+ T+L +P K+ + + +P+YE+VAR+ P PG+V P
Sbjct: 448 PSETSLADLSRVPSYKEATRSAVPLESPLQSTLPSYEDVARIEHLSRPPSPGIVTP 503
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 65 VRALFDYNSSEDPYIPCKEAGLDFKKGDILHIVSQDDAYWWQARREGDRVMRAGLIPSRA 124
V AL+DY + IP + + F+KGD L ++ + WW + GL PS
Sbjct: 871 VIALYDYQAQ----IPEE---ISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNF 923
Query: 125 LQ 126
+Q
Sbjct: 924 VQ 925
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 82 KEAGLDFKKGDILHIVSQDDAYWWQARREGDRVMRAGLIPS 122
+E L F +GD++ +S D WW R G+ PS
Sbjct: 21 REGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQ--GIFPS 59
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 182 KKIIYDITENDDFDRELIPTYEEVARLYPRPGL 214
+KI+ D +D +R YEE+AR YP+ L
Sbjct: 130 EKILIDHVHKNDINRFGTKVYEELARKYPQHSL 162
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.5 bits (58), Expect = 3.7
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 83 EAGLDFKKGDILHIVSQDDAYWW 105
E +D KGD++ ++ ++YWW
Sbjct: 134 EGQVDATKGDMMILLDDSNSYWW 156
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
Query: 86 LDFKKGDILHIVSQDDAY--WWQAR---REG 111
L F+KGDI+ IV + ++ WW R REG
Sbjct: 390 LSFQKGDIIDIVERSGSHDDWWTGRIGYREG 420
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
Query: 65 VRALFDYNSSEDPYIPCKEAGLDFKKGDILHIVS-QDDAYWWQ 106
+RAL+DY + K + F KGD H++ ++D W++
Sbjct: 29 IRALYDYTAR-------KATEVSFAKGDFFHVIGRENDKAWYE 64
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Query: 86 LDFKKGDILHIVSQDDAY-----WWQARR 109
+ KKGDI+ I+S+ D WWQ R+
Sbjct: 242 MSLKKGDIIAILSKTDTQGNPCEWWQGRK 270
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,930,630
Number of Sequences: 5004
Number of extensions: 81478
Number of successful extensions: 242
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 231
Number of HSP's gapped (non-prelim): 14
length of query: 421
length of database: 2,362,478
effective HSP length: 75
effective length of query: 346
effective length of database: 1,987,178
effective search space: 687563588
effective search space used: 687563588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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