Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000711-TA|BGIBMGA000711-PA|IPR001478|PDZ/DHR/GLGF,
IPR011511|Variant SH3, IPR008144|Guanylate kinase, IPR001452|Src
homology-3, IPR008145|Guanylate kinase/L-type calcium channel region
(421 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to ... 98 8e-21
At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to ... 97 3e-20
At3g06200.1 68416.m00713 guanylate kinase, putative similar to g... 48 2e-05
At3g57680.1 68416.m06426 peptidase S41 family protein similar to... 37 0.029
At5g46390.2 68418.m05710 peptidase S41 family protein similar to... 35 0.12
At5g46390.1 68418.m05709 peptidase S41 family protein similar to... 35 0.12
At1g80770.1 68414.m09476 expressed protein 32 0.63
At4g13370.1 68417.m02090 expressed protein 31 1.4
At2g19900.1 68415.m02326 malate oxidoreductase, putative similar... 31 1.9
At3g26260.1 68416.m03276 Ulp1 protease family protein contains P... 29 4.4
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 29 4.4
At2g24170.1 68415.m02888 endomembrane protein 70, putative simil... 29 4.4
At4g00040.1 68417.m05682 chalcone and stilbene synthase family p... 29 5.8
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 29 7.7
At4g17740.2 68417.m02649 C-terminal processing protease, putativ... 29 7.7
At4g17740.1 68417.m02648 C-terminal processing protease, putativ... 29 7.7
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 29 7.7
>At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to
guanylate kinase (GK-1) [Arabidopsis thaliana]
gi|7861795|gb|AAF70408
Length = 387
Score = 98.3 bits (234), Expect = 8e-21
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 216 RPIVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPIKSSEQNGKDYVFVTREKMEQD 275
+PIV+ G GVG+ L L+ P + + +T+R +S E +G Y F ++ ME++
Sbjct: 138 KPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRSPRSMEMDGVHYHFADKKVMEKE 197
Query: 276 ITDGKFIEHGEYKGNLYGTAAESVETIINTGRVCVLSPHWQALKMLRTPRLRPYIVFIKP 335
I DGKF+E GNLYGT+ ESVE + ++G+ C+L Q + +R L +F+ P
Sbjct: 198 IKDGKFLEFASVHGNLYGTSIESVEAVTDSGKRCILDIDVQGARSVRASSLDAIFIFVCP 257
Query: 336 PSLERMVETRTAANARSTFDKESSR 360
PS++ + E R A T ++ R
Sbjct: 258 PSMKEL-EDRLRARGTETEEQIQKR 281
>At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to
guanylate kinase (GK-2) [Arabidopsis thaliana]
gi|7861798|gb|AAF70409
Length = 389
Score = 96.7 bits (230), Expect = 3e-20
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 216 RPIVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPIKSSEQNGKDYVFVTREKMEQD 275
+PIV+ G GVG+ L L+ P + + +T+R + E+NG Y F + ME++
Sbjct: 138 KPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRCMEKNGVHYHFTDKTVMEKE 197
Query: 276 ITDGKFIEHGEYKGNLYGTAAESVETIINTGRVCVLSPHWQALKMLRTPRLRPYIVFIKP 335
I DGKF+E GNLYGT+ ESVE + ++G+ C+L Q + ++ L +F+ P
Sbjct: 198 IKDGKFLEFASVHGNLYGTSIESVEVVTDSGKRCILDIDVQGARSVKASSLDAIFIFVCP 257
Query: 336 PSLERMVETRTAANARSTFDKESSR 360
PS++ + E R A T ++ R
Sbjct: 258 PSMKEL-EDRLRARGTETEEQIQKR 281
>At3g06200.1 68416.m00713 guanylate kinase, putative similar to
guanylate kinase (GMP kinase) [Bacillus halodurans]
Swiss-Prot:Q9K9Y2; contains Pfam profile: PF00625
guanylate kinase
Length = 282
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 208 LYPRPGLVRPIVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPIKSSEQNGKDYVFV 267
+ P P + IV+ G GVG++ + +L + + TSRP++ E +GKDY FV
Sbjct: 82 IIPPPNQI-VIVISGPSGVGKDAVINKLREVREGLHFV-VTATSRPMRPGEVDGKDYFFV 139
Query: 268 TREKMEQDITDGKFIEHGEYKGNLYGTAAESVETIINTGRVCVLSPHWQALKMLR 322
+R++ + + + +E+ G G + ++ + G VL Q + LR
Sbjct: 140 SRDQFLSMVENEELLEYALVYGEYKGIPKKQIQEFMAKGEDIVLRVDIQGAQTLR 194
>At3g57680.1 68416.m06426 peptidase S41 family protein similar to
PSII D1 protein processing enzyme (GI::7268527)
[Arabidopsis thaliana]; similar to SP|Q55669
Carboxyl-terminal processing protease precursor
(Photosystem II D1 protein processing peptidase) (EC
3.4.21.102) [strain PCC 6803] {Synechocystis sp.};
contains Pfam profile PF03572: Peptidase family S41B
Length = 516
Score = 36.7 bits (81), Expect = 0.029
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 1 MHGGAADRSGLIHAGDEVIEVNGISVENKTPADVLSILQNSEGT-ITFKLVPSFGKG--- 56
+ G ADR+G IH G+E++E+NG +++ L+ GT +T KL G G
Sbjct: 216 VEGSPADRAG-IHEGEELVEINGEKLDDVDSEAAAQKLRGRVGTFVTIKLKNVNGSGTDS 274
Query: 57 GTRESKV 63
G RE K+
Sbjct: 275 GIREVKL 281
>At5g46390.2 68418.m05710 peptidase S41 family protein similar to
C-terminal peptidase of the D1 protein [Hordeum vulgare
subsp vulgare] GI:1296805; contains Pfam profiles
PF03572: Peptidase family S41B, PF00595: PDZ domain
(Also known as DHR or GLGF)
Length = 489
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 5 AADRSGLIHAGDEVIEVNGISVENKTPADVLSILQNSEGTITFKLVPSFGKGGTRES 61
AAD +G + GDE++ VNG+ V K+ +V S+LQ T L GK G +S
Sbjct: 226 AADIAG-VKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVV-LKVKHGKCGPVKS 280
>At5g46390.1 68418.m05709 peptidase S41 family protein similar to
C-terminal peptidase of the D1 protein [Hordeum vulgare
subsp vulgare] GI:1296805; contains Pfam profiles
PF03572: Peptidase family S41B, PF00595: PDZ domain
(Also known as DHR or GLGF)
Length = 428
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 5 AADRSGLIHAGDEVIEVNGISVENKTPADVLSILQNSEGTITFKLVPSFGKGGTRES 61
AAD +G + GDE++ VNG+ V K+ +V S+LQ T L GK G +S
Sbjct: 226 AADIAG-VKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVV-LKVKHGKCGPVKS 280
>At1g80770.1 68414.m09476 expressed protein
Length = 451
Score = 32.3 bits (70), Expect = 0.63
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 201 TYEEVARLYPRPGLVRP-IVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPI 254
T +V R P L P + L+GAP VG++ L R L PE I P+T+R I
Sbjct: 238 TIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPE--ICNYPFTTRGI 290
>At4g13370.1 68417.m02090 expressed protein
Length = 673
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 211 RPGLVRPIVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPIKSSEQNGKDYVFVTRE 270
+P + + + + RN++R + T P+++ +P + R + S ++N V VT E
Sbjct: 163 KPNVRQALAPVNQNEENRNQIRNQKPKTTPQRFSSPAS-SKRSVSSGKKNCSGAVAVTVE 221
Query: 271 KMEQDITDGK 280
+ + GK
Sbjct: 222 RDPSPVVSGK 231
>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P51615) {Vitis vinifera}
Length = 581
Score = 30.7 bits (66), Expect = 1.9
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 193 DFDRELIPTYEEVARLYPRPGLVRPIVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSR 252
DF + +E V L ++P VLIG+ GVGR+ + + A I S
Sbjct: 378 DFKKPWAHEHEPVKDLLGAIKAIKPTVLIGSSGVGRSFTKEVIEAMSSINERPLIMALSN 437
Query: 253 PIKSSEQNGKDYVFVTREKMEQDITDGKFIEHGEYKGNLY 292
P SE ++ T K G + EY+G ++
Sbjct: 438 PTTQSECTAEE--AYTWSKGRAIFASGSPFDPVEYEGKVF 475
>At3g26260.1 68416.m03276 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 989
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 167 PTATALLPCKSIPKVKKIIY-DITENDDFDRELIPTYEEVARLY 209
P A LL +S+P+++++ + ++ E+DD D E T +E+ RL+
Sbjct: 230 PHAIQLLFLESVPRIRELQFPEVDEDDDSDME--ETQKEIERLW 271
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 218 IVLIGAPGVGRNELRRRLVATDPEKYITPIPYTSRPIKSSEQNGKD 263
I +IG P VG++ + LV D ++P+ T+R +E G D
Sbjct: 371 IAIIGRPNVGKSSILNALVRED-RTIVSPVSGTTRDAIDAEFTGPD 415
>At2g24170.1 68415.m02888 endomembrane protein 70, putative similar
to MURA transposase of maize Mutator transposon
Length = 637
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 333 IKPPSLERMVETRTAANAR-STFDKESSRAFTEEEFTDIIRSSNRINFLYGYMFDEEVV 390
+KP S++ E + AR +T D + RA T E + N I F Y F E V
Sbjct: 198 VKPFSVKHEYEGQWNEKARLTTCDPHTKRAVTNSESPQEVEEGNEIIFTYDVDFQESEV 256
>At4g00040.1 68417.m05682 chalcone and stilbene synthase family
protein similar to chalcone synthase homolog PrChS1,
Pinus radiata, gb:U90341; similar to anther-specific
protein [Nicotiana sylvestris][GI:2326774], YY2 protein
[Oryza sativa][GI:2645170]
Length = 385
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 183 KIIYDITENDDFDRELIPTYEEVARLYPRPGLVRPIVLIGAPGVGRNELRRRLVATDPEK 242
++ DI EN+ R L+ T E + P RP L+GA G + ++ DP +
Sbjct: 173 RVAKDIAENNPGSRVLLTTSETTVLGFRPPNKARPYNLVGAALFG-DGAAALIIGADPTE 231
Query: 243 YITP 246
+P
Sbjct: 232 SESP 235
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 369 DIIRSSNRINFLYGYMFDEEVVNEDLASAVSQLLKAA 405
D+++S N+ F + +F+ E E++ +SQL+++A
Sbjct: 468 DLVQSGNKHPFTFDKVFNHEASQEEVFFEISQLVQSA 504
>At4g17740.2 68417.m02649 C-terminal processing protease, putative
similar to C-terminal protease precursor [Spinacia
oleracea] GI:999435; similar to SP|Q44879| (Bartonella
bacilliformis)
Length = 505
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 3 GGAADRSGLIHAGDEVIEVNGISVENKTPADVLSILQNSEGT 44
GG A+R+G++ GD + ++ + E T D +LQ EG+
Sbjct: 227 GGPANRAGIL-PGDVIQGIDNTTTETLTIYDAAQMLQGPEGS 267
>At4g17740.1 68417.m02648 C-terminal processing protease, putative
similar to C-terminal protease precursor [Spinacia
oleracea] GI:999435; similar to SP|Q44879| (Bartonella
bacilliformis)
Length = 515
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 3 GGAADRSGLIHAGDEVIEVNGISVENKTPADVLSILQNSEGT 44
GG A+R+G++ GD + ++ + E T D +LQ EG+
Sbjct: 237 GGPANRAGIL-PGDVIQGIDNTTTETLTIYDAAQMLQGPEGS 277
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 201 TYEEVARLYPRPGLVRPIVLIGAPGVGRNEL 231
T+ V R+ L +PI+L G+PGVG+ L
Sbjct: 1731 THRNVLRVLRAMQLSKPILLEGSPGVGKTSL 1761
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,086,866
Number of Sequences: 28952
Number of extensions: 429602
Number of successful extensions: 1077
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1068
Number of HSP's gapped (non-prelim): 20
length of query: 421
length of database: 12,070,560
effective HSP length: 83
effective length of query: 338
effective length of database: 9,667,544
effective search space: 3267629872
effective search space used: 3267629872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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