Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000710-TA|BGIBMGA000710-PA|IPR000535|Major sperm
protein, IPR008962|PapD-like
(248 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0103 - 25847224-25847331,25847785-25847862,25848487-258485... 82 5e-16
08_01_0361 + 3165516-3165564,3166316-3166386,3166481-3166562,316... 77 1e-14
04_04_0742 + 27706150-27706198,27706306-27706376,27706490-277065... 67 1e-11
02_05_0213 + 26815889-26816475,26817718-26817788,26817985-268180... 56 3e-08
10_08_0845 - 20968051-20968188,20968769-20968843,20969399-209694... 52 4e-07
02_05_0154 - 26330109-26330189,26330274-26330411,26330518-263306... 50 2e-06
11_03_0071 - 9589669-9590079,9592113-9592334,9592455-9592608,959... 38 0.008
08_01_0282 + 2299688-2299859,2300314-2300384,2300780-2300861,230... 36 0.023
11_06_0355 + 22638029-22638281,22638365-22638593,22640039-226401... 36 0.031
07_03_0883 + 22280381-22280708,22282008-22282078,22282228-222823... 35 0.054
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667... 34 0.094
04_03_0605 - 17923601-17924011,17925559-17925759,17925841-179259... 30 2.0
03_05_0540 + 25375261-25376931 30 2.0
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 30 2.0
02_01_0071 - 496936-497158,497231-497352,497918-497966,498141-49... 28 8.2
>02_05_0103 -
25847224-25847331,25847785-25847862,25848487-25848528,
25848641-25848763,25848856-25848971,25849062-25849143,
25849233-25849303,25849632-25849689
Length = 225
Score = 81.8 bits (193), Expect = 5e-16
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPV-YLDPNENHKHKF 59
+ LTN T++ V FK+KTT+PKKYCVRPN+G++AP S + +T Q P+ K KF
Sbjct: 30 LHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQSTSNVLVTMQAQREAPPDMQCKDKF 89
Query: 60 MVQSVIAPEGKTNID---QVWKEISPEQLMDYKLKCVFETPRGTNLNDSGD 107
+VQS I + T D ++ + S + + KLK V+ P T+LN +
Sbjct: 90 LVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKVVYTQPHPTSLNGGSE 140
>08_01_0361 +
3165516-3165564,3166316-3166386,3166481-3166562,
3166677-3166792,3166892-3167053,3167158-3167202,
3168097-3168174,3168632-3168742
Length = 237
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPV-YLDPNENHKHKF 59
M+LTN T+ V FK+KTT PK+YCVRPN GV+ P S ++ +T Q P+ K KF
Sbjct: 27 MQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTCDVTVTMQAQREAPPDMQCKDKF 86
Query: 60 MVQSVIAPEGKTNID---QVWKEISPEQLMDYKLKCVF 94
+VQSV A G T D +++ +++ + + ++KL+ V+
Sbjct: 87 LVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVY 124
>04_04_0742 +
27706150-27706198,27706306-27706376,27706490-27706571,
27706695-27706810,27706899-27707075,27707148-27707195,
27707786-27707863,27708724-27708837
Length = 244
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQ-PVYLDPNENHKHKF 59
M+LTN TN V FK+KTT P+KY VR G+L P S +I +T Q PV + + + K KF
Sbjct: 27 MQLTNKTNQYVAFKVKTTNPRKYSVRHACGILPPRSSCDITVTMQAPVEMLSDYHCKDKF 86
Query: 60 MVQSVIAPEGKTNID---QVWKEISPEQLMDYKLKCVF 94
+VQSV G T D +++ + + ++KL+ V+
Sbjct: 87 LVQSVAVGYGATMRDFVPELFTKAPGRVIEEFKLRVVY 124
>02_05_0213 +
26815889-26816475,26817718-26817788,26817985-26818073,
26818910-26818991,26819089-26819204,26819290-26819451,
26819531-26819680,26819969-26820037,26820375-26820491
Length = 480
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 14 KIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNE-NHKHKFMVQSVIAPEGKTN 72
++KTT P+KY VRP +G++ P I I+ QP P + N K KF++QSV+ +G T
Sbjct: 249 QVKTTNPRKYSVRPTTGIVLPRGSCGITISMQPPKEIPTDYNCKDKFLIQSVVVEDGTTQ 308
Query: 73 ID---QVWKEISPEQLMDYKLKCVF 94
D ++ + + + + ++KL+ V+
Sbjct: 309 KDIHSDMFSKEAGKVVEEFKLRVVY 333
>10_08_0845 -
20968051-20968188,20968769-20968843,20969399-20969425,
20969512-20969649,20969765-20969880,20970000-20970081,
20970105-20970226,20970314-20970368
Length = 250
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 14 KIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQ-PVYLDPNENHKHKFMVQSVIAPEGKTN 72
K+KTT+P+KY VRPN+ ++ P I IT Q P+ K KF++QS T+
Sbjct: 59 KVKTTSPRKYFVRPNASIIQPWDSCTITITLQAQKEYPPDMQCKDKFLIQST-KVAASTD 117
Query: 73 IDQV----WKEISPEQLMDYKLKCVFETPRGTNLNDSG 106
+D++ + + + + + KLK V+ P G++ +DSG
Sbjct: 118 MDEIPPNTFNKEVDKVIEEMKLKVVYTVPSGSS-DDSG 154
>02_05_0154 -
26330109-26330189,26330274-26330411,26330518-26330633,
26330782-26330863,26332706-26332770,26333016-26333112,
26334066-26334136,26334242-26334304,26334379-26334431,
26335143-26335192,26336295-26336340,26337014-26337019,
26337381-26337511,26337594-26337680,26338472-26338849
Length = 487
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 15 IKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENH-KHKFMVQSVIAPEGKTNI 73
+KTT+P+KY VRPN+ ++ P I IT Q P + K KF++QS T++
Sbjct: 350 VKTTSPRKYFVRPNANIVQPWDSCTITITLQAQKEYPQDMQCKDKFLIQST-RVAASTDM 408
Query: 74 DQV----WKEISPEQLMDYKLKCVFETPRGTNLNDSG 106
D++ + + + + + KLK V+ P G++ +DSG
Sbjct: 409 DEIPPDTFNKEVDKVIEEIKLKVVYTVPSGSS-DDSG 444
>11_03_0071 -
9589669-9590079,9592113-9592334,9592455-9592608,
9592981-9593212,9593303-9593558,9593850-9593870
Length = 431
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKH-KF 59
++LTN T+ + F K KKY +PN G +AP S + +T + P H F
Sbjct: 325 LQLTNQTDYFIAFNTKANQ-KKYSTQPNKGTIAPWSSCYVTVTMKAQETAPPYLQCHDMF 383
Query: 60 MVQSV-----IAPEGKTNIDQVWKEISPEQLMDYKLKCVF 94
+VQS + PE + ++++K+ + + + KL V+
Sbjct: 384 VVQSTRVNEDLEPETEDITEELFKKTMGKVVDEEKLPIVY 423
>08_01_0282 +
2299688-2299859,2300314-2300384,2300780-2300861,
2300949-2301067,2301338-2301415,2301500-2301619,
2301729-2301788
Length = 233
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHK 56
+++ N + V FK +TTAPK +RP G+LAP + I T P N K
Sbjct: 68 VKIKNISKSHVAFKFQTTAPKSCFMRPPGGILAPG--ESIIATVFKFVEHPENNEK 121
>11_06_0355 +
22638029-22638281,22638365-22638593,22640039-22640189,
22640307-22640507,22641322-22641735
Length = 415
Score = 35.9 bits (79), Expect = 0.031
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPV-YLDPNENHKHKF 59
++LTN ++D V F T KKY + + GV+AP S+ + +T QP PN F
Sbjct: 307 LQLTNKSDDIVEFYANTNK-KKYQIHRDQGVMAPWSRCYVIVTLQPQGSAPPNMQCDDMF 365
Query: 60 MVQS 63
V+S
Sbjct: 366 FVRS 369
>07_03_0883 +
22280381-22280708,22282008-22282078,22282228-22282345,
22282406-22282521,22283946-22284023,22284123-22284242,
22284332-22284391
Length = 296
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAP 34
+R+ N + V FK +TTAPK +RP +LAP
Sbjct: 120 IRIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAP 153
>10_02_0200 -
6672743-6673717,6676257-6676634,6677017-6677301,
6677420-6677570,6677696-6677930,6678689-6678764
Length = 699
Score = 34.3 bits (75), Expect = 0.094
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVY-LDPNENHKHKF 59
M L N T+ V +KI Y + P SG+++P I++ Q + PN +
Sbjct: 279 MLLKNKTHHYVAYKINAQKLNIYRIEPCSGLISPQFTCNISVRMQAQQGVSPNMQLMDRI 338
Query: 60 MVQSVIAPEGKTNI 73
+VQSV+ + +I
Sbjct: 339 LVQSVVVSDDLIDI 352
>04_03_0605 -
17923601-17924011,17925559-17925759,17925841-17925991,
17926068-17926299,17926424-17926682,17926805-17926903
Length = 450
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDP-NENHKHKF 59
++LTN + D V F ++ KY P+ GV+ P S++ I T + P N F
Sbjct: 345 LQLTNRSADRVAFAVQVDE-SKYRAVPDRGVVQPRSRRYIVATSRAQASAPTNLQRDDSF 403
Query: 60 MVQS 63
+++S
Sbjct: 404 LLRS 407
>03_05_0540 + 25375261-25376931
Length = 556
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 11 VLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYL 49
V F+++ ++ VRP++G+LAP + A+T + VYL
Sbjct: 38 VAFRLQPAVRSRFAVRPHTGILAPLA----AVTVEVVYL 72
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 52 NENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQL---MDYKLKCVF 94
NE+HKH+ + SV+ G+ + W SP+ L M++ +C+F
Sbjct: 1017 NESHKHQQHIASVLQRLGREKVK--WLNSSPDALKINMEFFQRCIF 1060
>02_01_0071 -
496936-497158,497231-497352,497918-497966,498141-498211,
498368-498454,498660-498740,498838-498901,498994-499057,
499246-499444,499916-500134
Length = 392
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 27 PNSGVLAPNSKQ-EIAITPQPVYLDPNENHKHKFMV--QSVIAPEGKTNIDQV 76
PN+ ++APN K I + Y P +N +MV +S+++ G +I+ V
Sbjct: 287 PNAVLIAPNRKNATILLQKLLYYFPPQDNDLSSYMVGDKSILSDAGLKSIEDV 339
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.128 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,591,343
Number of Sequences: 37544
Number of extensions: 243857
Number of successful extensions: 401
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 15
length of query: 248
length of database: 14,793,348
effective HSP length: 80
effective length of query: 168
effective length of database: 11,789,828
effective search space: 1980691104
effective search space used: 1980691104
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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