BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000710-TA|BGIBMGA000710-PA|IPR000535|Major sperm
protein, IPR008962|PapD-like
(248 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT019618-1|AAV38424.1| 242|Homo sapiens VAMP (vesicle-associate... 126 5e-29
BC002992-1|AAH02992.2| 249|Homo sapiens VAMP (vesicle-associate... 126 5e-29
AF154847-1|AAF72105.1| 242|Homo sapiens 33 kDa Vamp-associated ... 126 5e-29
AF086627-1|AAD13576.1| 242|Homo sapiens VAMP-associated protein... 126 5e-29
AF057358-1|AAC26508.1| 242|Homo sapiens VAMP-associated protein... 126 5e-29
AF044670-1|AAD09742.1| 242|Homo sapiens 33 kDa Vamp-associated ... 126 5e-29
BT009811-1|AAP88813.1| 243|Homo sapiens VAMP (vesicle-associate... 123 7e-28
BC001712-1|AAH01712.1| 243|Homo sapiens VAPB protein protein. 123 7e-28
AY358464-1|AAQ88829.1| 243|Homo sapiens VAPB protein. 123 7e-28
AL035455-3|CAC15021.1| 243|Homo sapiens VAMP (vesicle-associate... 123 7e-28
AF086628-1|AAD13577.1| 243|Homo sapiens VAMP-associated protein... 123 7e-28
AF160212-1|AAF67013.1| 243|Homo sapiens VAMP-associated 33 kDa ... 118 3e-26
BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain con... 57 7e-08
AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein pr... 57 7e-08
AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens ... 57 7e-08
AL035455-2|CAM27023.1| 99|Homo sapiens VAMP (vesicle-associate... 54 6e-07
AF086629-1|AAD13578.1| 99|Homo sapiens VAMP-associated protein... 54 6e-07
AB209665-1|BAD92902.1| 84|Homo sapiens VAMP-associated protein... 54 6e-07
AK127252-1|BAC86901.1| 147|Homo sapiens n B and C (VAPB). prot... 39 0.014
BC011653-1|AAH11653.1| 235|Homo sapiens motile sperm domain con... 33 0.71
BC005042-1|AAH05042.1| 235|Homo sapiens motile sperm domain con... 33 0.71
AF053356-8|AAC78798.1| 235|Homo sapiens ORF3splicevariant_b pro... 33 0.71
AF053356-7|AAC78799.1| 221|Homo sapiens ORF3splicevariant_a pro... 33 0.71
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 30 6.6
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein. 30 6.6
>BT019618-1|AAV38424.1| 242|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein A, 33kDa protein.
Length = 242
Score = 126 bits (305), Expect = 5e-29
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NP++ V FK+KTTAP++YCVRPNSG++ P S +++ QP DPNE KHKFM
Sbjct: 30 LKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP-RGTNLND 104
VQ++ AP ++++ VWKE P++LMD KL+CVFE P LND
Sbjct: 90 VQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLND 134
>BC002992-1|AAH02992.2| 249|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein A, 33kDa protein.
Length = 249
Score = 126 bits (305), Expect = 5e-29
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NP++ V FK+KTTAP++YCVRPNSG++ P S +++ QP DPNE KHKFM
Sbjct: 37 LKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFM 96
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP-RGTNLND 104
VQ++ AP ++++ VWKE P++LMD KL+CVFE P LND
Sbjct: 97 VQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLND 141
>AF154847-1|AAF72105.1| 242|Homo sapiens 33 kDa Vamp-associated
protein protein.
Length = 242
Score = 126 bits (305), Expect = 5e-29
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NP++ V FK+KTTAP++YCVRPNSG++ P S +++ QP DPNE KHKFM
Sbjct: 30 LKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP-RGTNLND 104
VQ++ AP ++++ VWKE P++LMD KL+CVFE P LND
Sbjct: 90 VQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLND 134
>AF086627-1|AAD13576.1| 242|Homo sapiens VAMP-associated protein A
protein.
Length = 242
Score = 126 bits (305), Expect = 5e-29
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NP++ V FK+KTTAP++YCVRPNSG++ P S +++ QP DPNE KHKFM
Sbjct: 30 LKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP-RGTNLND 104
VQ++ AP ++++ VWKE P++LMD KL+CVFE P LND
Sbjct: 90 VQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLND 134
>AF057358-1|AAC26508.1| 242|Homo sapiens VAMP-associated protein of
33 kDa protein.
Length = 242
Score = 126 bits (305), Expect = 5e-29
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NP++ V FK+KTTAP++YCVRPNSG++ P S +++ QP DPNE KHKFM
Sbjct: 30 LKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP-RGTNLND 104
VQ++ AP ++++ VWKE P++LMD KL+CVFE P LND
Sbjct: 90 VQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLND 134
>AF044670-1|AAD09742.1| 242|Homo sapiens 33 kDa Vamp-associated
protein protein.
Length = 242
Score = 126 bits (305), Expect = 5e-29
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NP++ V FK+KTTAP++YCVRPNSG++ P S +++ QP DPNE KHKFM
Sbjct: 30 LKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP-RGTNLND 104
VQ++ AP ++++ VWKE P++LMD KL+CVFE P LND
Sbjct: 90 VQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLND 134
>BT009811-1|AAP88813.1| 243|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 243
Score = 123 bits (296), Expect = 7e-28
Identities = 52/97 (53%), Positives = 70/97 (72%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NPT+ V FK+KTTAP++YCVRPNSG++ + +++ QP DPNE KHKFM
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP 97
VQS+ AP ++++ VWKE PE LMD KL+CVFE P
Sbjct: 90 VQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFELP 126
>BC001712-1|AAH01712.1| 243|Homo sapiens VAPB protein protein.
Length = 243
Score = 123 bits (296), Expect = 7e-28
Identities = 52/97 (53%), Positives = 70/97 (72%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NPT+ V FK+KTTAP++YCVRPNSG++ + +++ QP DPNE KHKFM
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP 97
VQS+ AP ++++ VWKE PE LMD KL+CVFE P
Sbjct: 90 VQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFELP 126
>AY358464-1|AAQ88829.1| 243|Homo sapiens VAPB protein.
Length = 243
Score = 123 bits (296), Expect = 7e-28
Identities = 52/97 (53%), Positives = 70/97 (72%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NPT+ V FK+KTTAP++YCVRPNSG++ + +++ QP DPNE KHKFM
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP 97
VQS+ AP ++++ VWKE PE LMD KL+CVFE P
Sbjct: 90 VQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFELP 126
>AL035455-3|CAC15021.1| 243|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 243
Score = 123 bits (296), Expect = 7e-28
Identities = 52/97 (53%), Positives = 70/97 (72%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NPT+ V FK+KTTAP++YCVRPNSG++ + +++ QP DPNE KHKFM
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP 97
VQS+ AP ++++ VWKE PE LMD KL+CVFE P
Sbjct: 90 VQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFELP 126
>AF086628-1|AAD13577.1| 243|Homo sapiens VAMP-associated protein B
protein.
Length = 243
Score = 123 bits (296), Expect = 7e-28
Identities = 52/97 (53%), Positives = 70/97 (72%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NPT+ V FK+KTTAP++YCVRPNSG++ + +++ QP DPNE KHKFM
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP 97
VQS+ AP ++++ VWKE PE LMD KL+CVFE P
Sbjct: 90 VQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFELP 126
>AF160212-1|AAF67013.1| 243|Homo sapiens VAMP-associated 33 kDa
protein protein.
Length = 243
Score = 118 bits (283), Expect = 3e-26
Identities = 52/97 (53%), Positives = 68/97 (70%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFM 60
++L NPT+ V FK+KTTAP++YCVRPNSGV+ + +++ QP DPNE KHKFM
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGASLNVSVMLQPFDYDPNEKSKHKFM 89
Query: 61 VQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETP 97
VQS+ AP +++D KE PE LMD KL+CVFE P
Sbjct: 90 VQSMFAPPDTSDMDGTRKEAKPEDLMDSKLRCVFELP 126
>BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain
containing 2 protein.
Length = 518
Score = 56.8 bits (131), Expect = 7e-08
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 3 LTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFMVQ 62
LTN T + V FK++TTAP+KY V+P++ P + +I ++P L + + M
Sbjct: 352 LTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHG-GLTVSAQDRFLIMAA 410
Query: 63 SV--IAPEGKTNIDQVWKEISPEQLMDYKLKC 92
+ + G + Q WKE+ ++M+++L+C
Sbjct: 411 EMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 442
>AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein
protein.
Length = 243
Score = 56.8 bits (131), Expect = 7e-08
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 3 LTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFMVQ 62
LTN T + V FK++TTAP+KY V+P++ P + +I ++P L + + M
Sbjct: 77 LTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHG-GLTVSAQDRFLIMAA 135
Query: 63 SV--IAPEGKTNIDQVWKEISPEQLMDYKLKC 92
+ + G + Q WKE+ ++M+++L+C
Sbjct: 136 EMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 167
>AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ35756 fis, clone TESTI2004687. ).
Length = 455
Score = 56.8 bits (131), Expect = 7e-08
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 3 LTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAITPQPVYLDPNENHKHKFMVQ 62
LTN T + V FK++TTAP+KY V+P++ P + +I ++P L + + M
Sbjct: 289 LTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHG-GLTVSAQDRFLIMAA 347
Query: 63 SV--IAPEGKTNIDQVWKEISPEQLMDYKLKC 92
+ + G + Q WKE+ ++M+++L+C
Sbjct: 348 EMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 379
>AL035455-2|CAM27023.1| 99|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 99
Score = 53.6 bits (123), Expect = 6e-07
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 32
++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
>AF086629-1|AAD13578.1| 99|Homo sapiens VAMP-associated protein
C protein.
Length = 99
Score = 53.6 bits (123), Expect = 6e-07
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 32
++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 30 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
>AB209665-1|BAD92902.1| 84|Homo sapiens VAMP-associated protein
B/C variant protein.
Length = 84
Score = 53.6 bits (123), Expect = 6e-07
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 32
++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 15 LKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 46
>AK127252-1|BAC86901.1| 147|Homo sapiens n B and C (VAPB).
protein.
Length = 147
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 76 VWKEISPEQLMDYKLKCVFETP 97
+WKE PE LMD KL+CVFE P
Sbjct: 9 LWKEAKPEDLMDSKLRCVFELP 30
>BC011653-1|AAH11653.1| 235|Homo sapiens motile sperm domain
containing 3 protein.
Length = 235
Score = 33.5 bits (73), Expect = 0.71
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI---TPQPVYLDPNENHK 56
+ L NPT + F++ TAP KY V G + P S +I I P P + D + +
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVAPIPSHYDVQDRFR 113
>BC005042-1|AAH05042.1| 235|Homo sapiens motile sperm domain
containing 3 protein.
Length = 235
Score = 33.5 bits (73), Expect = 0.71
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI---TPQPVYLDPNENHK 56
+ L NPT + F++ TAP KY V G + P S +I I P P + D + +
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVAPIPSHYDVQDRFR 113
>AF053356-8|AAC78798.1| 235|Homo sapiens ORF3splicevariant_b
protein.
Length = 235
Score = 33.5 bits (73), Expect = 0.71
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI---TPQPVYLDPNENHK 56
+ L NPT + F++ TAP KY V G + P S +I I P P + D + +
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVAPIPSHYDVQDRFR 113
>AF053356-7|AAC78799.1| 221|Homo sapiens ORF3splicevariant_a
protein.
Length = 221
Score = 33.5 bits (73), Expect = 0.71
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 1 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI---TPQPVYLDPNENHK 56
+ L NPT + F++ TAP KY V G + P S +I I P P + D + +
Sbjct: 41 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVAPIPSHYDVQDRFR 99
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 136 LIQHEDKNKDDDHPVASI-NLKTTNTKSENVESDLQKATLEVIHLREEESKLRHE 189
LI + NKD ++I + K +++E+ L+ + LE HL+EE KL+ E
Sbjct: 2358 LIHQIEANKDQSGAESTIPDADQLKEKIKDLETQLKMSDLEKQHLKEEIKKLKKE 2412
>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
Length = 1540
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 136 LIQHEDKNKDDDHPVASI-NLKTTNTKSENVESDLQKATLEVIHLREEESKLRHE 189
LI + NKD ++I + K +++E+ L+ + LE HL+EE KL+ E
Sbjct: 1419 LIHQIEANKDQSGAESTIPDADQLKEKIKDLETQLKMSDLEKQHLKEEIKKLKKE 1473
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.128 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,618,754
Number of Sequences: 224733
Number of extensions: 1202964
Number of successful extensions: 1912
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1886
Number of HSP's gapped (non-prelim): 25
length of query: 248
length of database: 73,234,838
effective HSP length: 88
effective length of query: 160
effective length of database: 53,458,334
effective search space: 8553333440
effective search space used: 8553333440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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