GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000709-TA|BGIBMGA000709-PA|IPR002048|Calcium-binding
EF-hand
         (155 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   3.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.8  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   5.8  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   5.8  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 112 PQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRI 146
           PQ   D+ F+ + +     +TL    EGS A PR+
Sbjct: 61  PQGIEDEFFEYLSQLTAKDVTLYAIEEGSVAFPRV 95


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 5/26 (19%)

Query: 107 EDENTPQKRVDKIFDQMDKNHDDRLT 132
           EDEN   K      D M+ NH D+LT
Sbjct: 752 EDENEDTKA-----DNMNNNHSDQLT 772


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 113 QKRVDKIFDQMDKNHDDRLTLEEFR-EGSKADPRIVQALSL 152
           +KR + + + +DKNH  ++  +E + + +  D  +V+  S+
Sbjct: 48  EKRKETLGESLDKNHKKKIERDEEKLKNNNRDLSLVKMKSM 88


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 107 EDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 139
           E+   P+K   K   +  KN+ + L +E+ R+G
Sbjct: 39  EENEAPRKVSHKAQLERFKNYANNLEIEDLRDG 71


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.140    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,663
Number of Sequences: 2123
Number of extensions: 7042
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 4
length of query: 155
length of database: 516,269
effective HSP length: 59
effective length of query: 96
effective length of database: 391,012
effective search space: 37537152
effective search space used: 37537152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)