GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000708-TA|BGIBMGA000708-PA|undefined
         (487 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   4.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   4.8  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   6.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   6.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   6.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   6.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   6.4  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    23   6.4  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.4  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.4  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   8.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   8.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   8.4  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 267 PNEKHQCNELLRNCSFYKQRIAGKSLPME-KF-MIKRAARYYTQGGRLVLPAIELLCLWN 324
           P+EK   N LL   +  ++ +A +S P+E KF +  +      +  +L++  I L   WN
Sbjct: 2   PHEKRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWN 61

Query: 325 MFGI 328
            + +
Sbjct: 62  DYNL 65


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 267 PNEKHQCNELLRNCSFYKQRIAGKSLPME-KF-MIKRAARYYTQGGRLVLPAIELLCLWN 324
           P+EK   N LL   +  ++ +A +S P+E KF +  +      +  +L++  I L   WN
Sbjct: 2   PHEKRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWN 61

Query: 325 MFGI 328
            + +
Sbjct: 62  DYNL 65


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 188 RGLFEPAISTYNCALN 203
           RGLF  AI    CALN
Sbjct: 208 RGLFHKAILQSGCALN 223


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 188 RGLFEPAISTYNCALN 203
           RGLF  AI    CALN
Sbjct: 208 RGLFHKAILQSGCALN 223


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 188 RGLFEPAISTYNCALN 203
           RGLF  AI    CALN
Sbjct: 208 RGLFHKAILQSGCALN 223


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 188 RGLFEPAISTYNCALN 203
           RGLF  AI    CALN
Sbjct: 208 RGLFHKAILQSGCALN 223


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 188 RGLFEPAISTYNCALN 203
           RGLF  AI    CALN
Sbjct: 207 RGLFHKAILQSGCALN 222


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 6/17 (35%), Positives = 14/17 (82%)

Query: 156 DLKVCEEILEKILKIYP 172
           +LK  E +++++L++YP
Sbjct: 44  ELKYMERVIKEVLRLYP 60


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 267 PNEKHQCNELLRNCSFYKQRIAGKSLPME 295
           P+EK   N LL   +  ++ +A +S P+E
Sbjct: 2   PHEKRLLNNLLGPYNVLERPVANESEPLE 30


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 267 PNEKHQCNELLRNCSFYKQRIAGKSLPME 295
           P+EK   N LL   +  ++ +A +S P+E
Sbjct: 2   PHEKRLLNNLLGPYNVLERPVANESEPLE 30


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 267 PNEKHQCNELLRNCSFYKQRIAGKSLPME 295
           P+EK   N LL   +  ++ +A +S P+E
Sbjct: 2   PHEKRLLNNLLGPYNVLERPVANESEPLE 30


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 188 RGLFEPAISTYNCALN 203
           +GLF  AI+   CALN
Sbjct: 205 KGLFHRAIAQSGCALN 220


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 188 RGLFEPAISTYNCALN 203
           +GLF  AI+   CALN
Sbjct: 203 KGLFHRAIAQSGCALN 218


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 188 RGLFEPAISTYNCALN 203
           +GLF  AI+   CALN
Sbjct: 205 KGLFHRAIAQSGCALN 220


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,634
Number of Sequences: 317
Number of extensions: 4290
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 14
length of query: 487
length of database: 114,650
effective HSP length: 59
effective length of query: 428
effective length of database: 95,947
effective search space: 41065316
effective search space used: 41065316
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)