GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000708-TA|BGIBMGA000708-PA|undefined
         (487 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   8.0  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 408 PYTVVEVAMCHYQLGDKDKAVQLLNEA 434
           P  +  VA  HY+LG+ D+A+  L +A
Sbjct: 450 PEILNNVAALHYRLGNLDEAMSKLEQA 476


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 217 WEIMWVNSLKMEWREAAQYATKLMDESSWSRTIYSYTKAAMLLQLGSDMTPNEKHQCNEL 276
           W+ +W+     + ++    ++  +DES W   + +          GSD+T   +H C+E 
Sbjct: 55  WKALWIRDGFFDGKQREFRSSFFVDESGW-LLVRNREGLQFYRMEGSDLT--LRHYCSEA 111

Query: 277 L 277
           +
Sbjct: 112 I 112


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,105
Number of Sequences: 2123
Number of extensions: 16859
Number of successful extensions: 33
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 31
Number of HSP's gapped (non-prelim): 3
length of query: 487
length of database: 516,269
effective HSP length: 67
effective length of query: 420
effective length of database: 374,028
effective search space: 157091760
effective search space used: 157091760
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)