Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000706-TA|BGIBMGA000706-PA|undefined
         (99 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   1.2  

>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
          receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 54 LARIIAALTDLHFTTFLAGAND 75
          LAR++A L  LH  +  +G +D
Sbjct: 20 LARMLALLVSLHRLSIYSGGSD 41


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.327    0.139    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,395
Number of Sequences: 429
Number of extensions: 682
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 99
length of database: 140,377
effective HSP length: 49
effective length of query: 50
effective length of database: 119,356
effective search space:  5967800
effective search space used:  5967800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.8 bits)
S2: 38 (19.4 bits)