GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000706-TA|BGIBMGA000706-PA|undefined
         (99 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q21FA0 Cluster: Sensor protein; n=2; cellular organisms...    30   8.0  
UniRef50_Q0S3J6 Cluster: Possible transcriptional regulator; n=2...    30   8.0  
UniRef50_A6DRG3 Cluster: Serine/threonine protein kinase; n=1; L...    30   8.0  
UniRef50_P32825 Cluster: Carboxypeptidase sxa2 precursor; n=1; S...    30   8.0  

>UniRef50_Q21FA0 Cluster: Sensor protein; n=2; cellular
           organisms|Rep: Sensor protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 1000

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)

Query: 33  YEELVNVRDMLKSVSNCVSGGLARIIAA---LTDLHFTTFLAGANDLLGMVHVTPWSR 87
           Y +L+ +R +L +V   V     R++ +   LTDL  T F+A    L G++ V  WSR
Sbjct: 373 YGQLIWMRRILIAVVILVGFMFYRLLGSHFNLTDLALTAFIATLQFLPGVIAVAHWSR 430


>UniRef50_Q0S3J6 Cluster: Possible transcriptional regulator; n=2;
           Nocardiaceae|Rep: Possible transcriptional regulator -
           Rhodococcus sp. (strain RHA1)
          Length = 412

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 34  EELVNVRDMLKSVSNCVSGGLARIIAALTDLHFTTFLAGANDLLGMV 80
           E+   +RD+   V+ CV+G L  +   LT +  TT  A    ++G +
Sbjct: 134 EDRTRIRDVFVHVTQCVAGPLRELRPELTSVDATTLGASTLSVMGSI 180


>UniRef50_A6DRG3 Cluster: Serine/threonine protein kinase; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Serine/threonine
           protein kinase - Lentisphaera araneosa HTCC2155
          Length = 1662

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 14  IPLILEGVGRSNDMKCMMPYEELVNVRDMLKSVSNCVSGGLARIIAALT 62
           +P++ +    S DMK + P E +++  D  K V     GG  R +A L+
Sbjct: 315 VPVVKKAQRISKDMKTLSPNEYIIDFNDSAKPVMQKAKGGDDRKVADLS 363


>UniRef50_P32825 Cluster: Carboxypeptidase sxa2 precursor; n=1;
           Schizosaccharomyces pombe|Rep: Carboxypeptidase sxa2
           precursor - Schizosaccharomyces pombe (Fission yeast)
          Length = 507

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 17/33 (51%), Positives = 20/33 (60%)

Query: 44  KSVSNCVSGGLARIIAALTDLHFTTFLAGANDL 76
           K VSN V   L  II  LT+ +  +FLAGA DL
Sbjct: 403 KIVSNNVESVLVEIIPRLTEKYKVSFLAGALDL 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.327    0.139    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,997,929
Number of Sequences: 1657284
Number of extensions: 3303040
Number of successful extensions: 8059
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8056
Number of HSP's gapped (non-prelim): 4
length of query: 99
length of database: 575,637,011
effective HSP length: 76
effective length of query: 23
effective length of database: 449,683,427
effective search space: 10342718821
effective search space used: 10342718821
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 65 (30.3 bits)