GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000705-TA|BGIBMGA000705-PA|IPR003929|Calcium-activated
BK potassium channel, alpha subunit
         (1061 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   2.0  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   2.0  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    25   7.9  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 308 NPGPRHIMKSTDTCYYMSITKEENSAFVVSDKQAVPNPTIPKDQTACSFLSNERNPDEGS 367
           N G R   KS+++       +E +S  VV D++   NP +          +   N D   
Sbjct: 11  NKGARKRQKSSESD---EAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADSSH 67

Query: 368 TSQQKKPDGSS 378
           +S++++  G S
Sbjct: 68  SSEEEESAGLS 78


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 308 NPGPRHIMKSTDTCYYMSITKEENSAFVVSDKQAVPNPTIPKDQTACSFLSNERNPDEGS 367
           N G R   KS+++       +E +S  VV D++   NP +          +   N D   
Sbjct: 11  NKGARKRQKSSESD---EAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADSSH 67

Query: 368 TSQQKKPDGSS 378
           +S++++  G S
Sbjct: 68  SSEEEESAGLS 78


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 845 DNHIQQIERAEIANLVRSRMESLNLTGVD--YDDVSEK 880
           DNHI    R    N    R+   NLTG D   DD+ +K
Sbjct: 350 DNHINFDARKGCVNNAGGRVLKRNLTGSDQTIDDIEDK 387


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.134    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,052,286
Number of Sequences: 2123
Number of extensions: 43476
Number of successful extensions: 82
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 5
length of query: 1061
length of database: 516,269
effective HSP length: 71
effective length of query: 990
effective length of database: 365,536
effective search space: 361880640
effective search space used: 361880640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)