Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000705-TA|BGIBMGA000705-PA|IPR003929|Calcium-activated
BK potassium channel, alpha subunit
(1061 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr... 355 1e-97
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr... 355 1e-97
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr... 355 1e-97
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi... 355 1e-97
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota... 355 1e-97
AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical... 94 4e-19
AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical... 94 4e-19
AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conduct... 94 4e-19
AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conduct... 94 4e-19
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical... 89 2e-17
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct... 89 2e-17
Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical pr... 31 4.3
AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear recep... 31 4.3
AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear recep... 31 4.3
Z48583-2|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 30 7.6
>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
protein F08B12.3c protein.
Length = 1086
Score = 355 bits (872), Expect = 1e-97
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 5/291 (1%)
Query: 41 EQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDYYVVL 100
++L TW ERQK G +SS E HVVV TTL + I DFL EFYAHP Q +VL
Sbjct: 275 DELGQTWSERQKSGTDFSSWNGV-ESHVVVTITTLEVEFIRDFLEEFYAHPENQRIQIVL 333
Query: 101 LSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTA 160
LSP ELD RM+L++P+W RV Y++GS L+D DL RA + ++ACFIL+AR+ K A
Sbjct: 334 LSPAELDNQTRMLLKIPLWNNRVHYVRGSSLRDEDLERANVATSKACFILSARHVNRKVA 393
Query: 161 ADEHTILRSWAVKDFAPKVAQYVQIFRPENKLHVKFAEFVVCEDEFKYALLANNCTCPGA 220
DEHTILRSWA+KDFAP V QYVQIFR E K+H++ AE ++CEDEFKYALLANNC CPG
Sbjct: 394 TDEHTILRSWAIKDFAPNVKQYVQIFRAETKMHIEHAEVLICEDEFKYALLANNCICPGI 453
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST +TLL+HTSRG+EGQ+S E WH++YG SGNE+Y I + DS+FF EY GKSF+ SFH
Sbjct: 454 STFITLLMHTSRGEEGQKSTEPWHKVYGFHSGNEMYQIKVQDSKFFCEYVGKSFSSTSFH 513
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEEN 331
+H++YG+ L+ V P+ + LNPG HI++ TDT YYM +T EE+
Sbjct: 514 AHKEYGIGLIAVS----PDGDTSRMKLNPGSSHIIQPTDTVYYMGLTNEES 560
Score = 173 bits (422), Expect = 4e-43
Identities = 77/127 (60%), Positives = 101/127 (79%)
Query: 667 ITELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGSVFSASMLDT 726
ITEL+ ++NMRF+QF H+ Y+L S+ EK+E++RGSH+ +MFRLPFA G VFSA+MLD
Sbjct: 835 ITELTHATNMRFVQFNPHNAYSLAQSRFEKKERKRGSHMPFMFRLPFAQGGVFSANMLDR 894
Query: 727 LLYQAFVKDYMITFVRLLLGIDQAPGSGFLASIKITKEDMWIRTYGRLYQKLCSTSCEIP 786
LLYQA +K +++ VRLLLGIDQ G+L S IT +D+WIR YGRLYQKLCS+ +IP
Sbjct: 895 LLYQAIIKPFVVDLVRLLLGIDQHSDGGYLTSFVITSDDLWIRNYGRLYQKLCSSVADIP 954
Query: 787 IGIYRTQ 793
IGI+RT+
Sbjct: 955 IGIFRTK 961
Score = 130 bits (313), Expect = 7e-30
Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 548 RIVKGFPPVSPFIGVSPTLCFLLKEKKPLCCLQLAQVCEHCAYRNAKEYQWQNKTIILAA 607
++ + +P V +IG S T+C ++KE++ LCCL+L + C H + +A EYQW+N+ IILAA
Sbjct: 663 KLQRTYPQVRTYIGTSNTVCHMMKERRSLCCLKLDEKCAHKSATSAHEYQWRNRPIILAA 722
Query: 608 DYASNGIYNFIIPLRAHFRSKTTLNPIILLLERRP----DVAFLDAISYFPLVYWMLGTI 663
D S+G+YN +IPLRA++R L+PII+LLE + AFLDAISYFP VYWM G +
Sbjct: 723 DRTSSGMYNLVIPLRAYYRPVHDLHPIIILLELEEQDSLNDAFLDAISYFPDVYWMKGKV 782
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 832 TPVYSTSLADEARDNHIQQIER-AEIANLVRSRMESLNLTGVD-YDDVSEKRNSLSYVII 889
T S L ++ +D ++ R ++ + V++RM LN+ + S++++ +SYVII
Sbjct: 965 TKTVSLDLQEQCKDFENTEMGRNKDMYDHVKNRMRLLNIKDTHTLLEGSDEKSQISYVII 1024
Query: 890 NPSCDLNLQEGDIMNLV 906
NP+ DL L+ GDI+ ++
Sbjct: 1025 NPAQDLELESGDIVYVI 1041
>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
protein F08B12.3b protein.
Length = 1107
Score = 355 bits (872), Expect = 1e-97
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 5/291 (1%)
Query: 41 EQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDYYVVL 100
++L TW ERQK G +SS E HVVV TTL + I DFL EFYAHP Q +VL
Sbjct: 296 DELGQTWSERQKSGTDFSSWNGV-ESHVVVTITTLEVEFIRDFLEEFYAHPENQRIQIVL 354
Query: 101 LSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTA 160
LSP ELD RM+L++P+W RV Y++GS L+D DL RA + ++ACFIL+AR+ K A
Sbjct: 355 LSPAELDNQTRMLLKIPLWNNRVHYVRGSSLRDEDLERANVATSKACFILSARHVNRKVA 414
Query: 161 ADEHTILRSWAVKDFAPKVAQYVQIFRPENKLHVKFAEFVVCEDEFKYALLANNCTCPGA 220
DEHTILRSWA+KDFAP V QYVQIFR E K+H++ AE ++CEDEFKYALLANNC CPG
Sbjct: 415 TDEHTILRSWAIKDFAPNVKQYVQIFRAETKMHIEHAEVLICEDEFKYALLANNCICPGI 474
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST +TLL+HTSRG+EGQ+S E WH++YG SGNE+Y I + DS+FF EY GKSF+ SFH
Sbjct: 475 STFITLLMHTSRGEEGQKSTEPWHKVYGFHSGNEMYQIKVQDSKFFCEYVGKSFSSTSFH 534
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEEN 331
+H++YG+ L+ V P+ + LNPG HI++ TDT YYM +T EE+
Sbjct: 535 AHKEYGIGLIAVS----PDGDTSRMKLNPGSSHIIQPTDTVYYMGLTNEES 581
Score = 173 bits (422), Expect = 4e-43
Identities = 77/127 (60%), Positives = 101/127 (79%)
Query: 667 ITELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGSVFSASMLDT 726
ITEL+ ++NMRF+QF H+ Y+L S+ EK+E++RGSH+ +MFRLPFA G VFSA+MLD
Sbjct: 856 ITELTHATNMRFVQFNPHNAYSLAQSRFEKKERKRGSHMPFMFRLPFAQGGVFSANMLDR 915
Query: 727 LLYQAFVKDYMITFVRLLLGIDQAPGSGFLASIKITKEDMWIRTYGRLYQKLCSTSCEIP 786
LLYQA +K +++ VRLLLGIDQ G+L S IT +D+WIR YGRLYQKLCS+ +IP
Sbjct: 916 LLYQAIIKPFVVDLVRLLLGIDQHSDGGYLTSFVITSDDLWIRNYGRLYQKLCSSVADIP 975
Query: 787 IGIYRTQ 793
IGI+RT+
Sbjct: 976 IGIFRTK 982
Score = 130 bits (313), Expect = 7e-30
Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 548 RIVKGFPPVSPFIGVSPTLCFLLKEKKPLCCLQLAQVCEHCAYRNAKEYQWQNKTIILAA 607
++ + +P V +IG S T+C ++KE++ LCCL+L + C H + +A EYQW+N+ IILAA
Sbjct: 684 KLQRTYPQVRTYIGTSNTVCHMMKERRSLCCLKLDEKCAHKSATSAHEYQWRNRPIILAA 743
Query: 608 DYASNGIYNFIIPLRAHFRSKTTLNPIILLLERRP----DVAFLDAISYFPLVYWMLGTI 663
D S+G+YN +IPLRA++R L+PII+LLE + AFLDAISYFP VYWM G +
Sbjct: 744 DRTSSGMYNLVIPLRAYYRPVHDLHPIIILLELEEQDSLNDAFLDAISYFPDVYWMKGKV 803
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 832 TPVYSTSLADEARDNHIQQIER-AEIANLVRSRMESLNLTGVD-YDDVSEKRNSLSYVII 889
T S L ++ +D ++ R ++ + V++RM LN+ + S++++ +SYVII
Sbjct: 986 TKTVSLDLQEQCKDFENTEMGRNKDMYDHVKNRMRLLNIKDTHTLLEGSDEKSQISYVII 1045
Query: 890 NPSCDLNLQEGDIMNLV 906
NP+ DL L+ GDI+ ++
Sbjct: 1046 NPAQDLELESGDIVYVI 1062
>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
protein F08B12.3a protein.
Length = 1119
Score = 355 bits (872), Expect = 1e-97
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 5/291 (1%)
Query: 41 EQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDYYVVL 100
++L TW ERQK G +SS E HVVV TTL + I DFL EFYAHP Q +VL
Sbjct: 296 DELGQTWSERQKSGTDFSSWNGV-ESHVVVTITTLEVEFIRDFLEEFYAHPENQRIQIVL 354
Query: 101 LSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTA 160
LSP ELD RM+L++P+W RV Y++GS L+D DL RA + ++ACFIL+AR+ K A
Sbjct: 355 LSPAELDNQTRMLLKIPLWNNRVHYVRGSSLRDEDLERANVATSKACFILSARHVNRKVA 414
Query: 161 ADEHTILRSWAVKDFAPKVAQYVQIFRPENKLHVKFAEFVVCEDEFKYALLANNCTCPGA 220
DEHTILRSWA+KDFAP V QYVQIFR E K+H++ AE ++CEDEFKYALLANNC CPG
Sbjct: 415 TDEHTILRSWAIKDFAPNVKQYVQIFRAETKMHIEHAEVLICEDEFKYALLANNCICPGI 474
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST +TLL+HTSRG+EGQ+S E WH++YG SGNE+Y I + DS+FF EY GKSF+ SFH
Sbjct: 475 STFITLLMHTSRGEEGQKSTEPWHKVYGFHSGNEMYQIKVQDSKFFCEYVGKSFSSTSFH 534
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEEN 331
+H++YG+ L+ V P+ + LNPG HI++ TDT YYM +T EE+
Sbjct: 535 AHKEYGIGLIAVS----PDGDTSRMKLNPGSSHIIQPTDTVYYMGLTNEES 581
Score = 184 bits (449), Expect = 2e-46
Identities = 106/240 (44%), Positives = 145/240 (60%), Gaps = 21/240 (8%)
Query: 667 ITELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGSVFSASMLDT 726
ITEL+ ++NMRF+QF H+ Y+L S+ EK+E++RGSH+ +MFRLPFA G VFSA+MLD
Sbjct: 856 ITELTHATNMRFVQFNPHNAYSLAQSRFEKKERKRGSHMPFMFRLPFAQGGVFSANMLDR 915
Query: 727 LLYQAFVKDYMITFVRLLLGIDQAPGSGFLASIKITKEDMWIRTYGRLYQKLCSTSCEIP 786
LLYQA +K +++ VRLLLGIDQ G+L S IT +D+WIR YGRLYQKLCS+ +IP
Sbjct: 916 LLYQAIIKPFVVDLVRLLLGIDQHSDGGYLTSFVITSDDLWIRNYGRLYQKLCSSVADIP 975
Query: 787 IGIYRTQDTSMADASHHQEELDGGDFPACGRQEATSCLGGCYGERTPVYSTSLADEARDN 846
IGI+RT+ S +E C E T +G V + +D
Sbjct: 976 IGIFRTKKMDTKTVSLDLQE-------QCKDFENTE-MGRNKDMYDHVKNRMRLLNIKDT 1027
Query: 847 HIQQIERAEIANLVRSRMESLNLTGVDYDDVSEKRNSLSYVIINPSCDLNLQEGDIMNLV 906
H + A SR S L G S++++ +SYVIINP+ DL L+ GDI+ ++
Sbjct: 1028 HTFNWKYA-------SRCRSTVLEG------SDEKSQISYVIINPAQDLELESGDIVYVI 1074
Score = 130 bits (313), Expect = 7e-30
Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 548 RIVKGFPPVSPFIGVSPTLCFLLKEKKPLCCLQLAQVCEHCAYRNAKEYQWQNKTIILAA 607
++ + +P V +IG S T+C ++KE++ LCCL+L + C H + +A EYQW+N+ IILAA
Sbjct: 684 KLQRTYPQVRTYIGTSNTVCHMMKERRSLCCLKLDEKCAHKSATSAHEYQWRNRPIILAA 743
Query: 608 DYASNGIYNFIIPLRAHFRSKTTLNPIILLLERRP----DVAFLDAISYFPLVYWMLGTI 663
D S+G+YN +IPLRA++R L+PII+LLE + AFLDAISYFP VYWM G +
Sbjct: 744 DRTSSGMYNLVIPLRAYYRPVHDLHPIIILLELEEQDSLNDAFLDAISYFPDVYWMKGKV 803
>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
channel protein.
Length = 1107
Score = 355 bits (872), Expect = 1e-97
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 5/291 (1%)
Query: 41 EQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDYYVVL 100
++L TW ERQK G +SS E HVVV TTL + I DFL EFYAHP Q +VL
Sbjct: 296 DELGQTWSERQKSGTDFSSWNGV-ESHVVVTITTLEVEFIRDFLEEFYAHPENQRIQIVL 354
Query: 101 LSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTA 160
LSP ELD RM+L++P+W RV Y++GS L+D DL RA + ++ACFIL+AR+ K A
Sbjct: 355 LSPAELDNQTRMLLKIPLWNNRVHYVRGSSLRDEDLERANVATSKACFILSARHVNRKVA 414
Query: 161 ADEHTILRSWAVKDFAPKVAQYVQIFRPENKLHVKFAEFVVCEDEFKYALLANNCTCPGA 220
DEHTILRSWA+KDFAP V QYVQIFR E K+H++ AE ++CEDEFKYALLANNC CPG
Sbjct: 415 TDEHTILRSWAIKDFAPNVKQYVQIFRAETKMHIEHAEVLICEDEFKYALLANNCICPGI 474
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST +TLL+HTSRG+EGQ+S E WH++YG SGNE+Y I + DS+FF EY GKSF+ SFH
Sbjct: 475 STFITLLMHTSRGEEGQKSTEPWHKVYGFHSGNEMYQIKVQDSKFFCEYVGKSFSSTSFH 534
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEEN 331
+H++YG+ L+ V P+ + LNPG HI++ TDT YYM +T EE+
Sbjct: 535 AHKEYGIGLIAVS----PDGDTSRMKLNPGSSHIIQPTDTVYYMGLTNEES 581
Score = 173 bits (422), Expect = 4e-43
Identities = 77/127 (60%), Positives = 101/127 (79%)
Query: 667 ITELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGSVFSASMLDT 726
ITEL+ ++NMRF+QF H+ Y+L S+ EK+E++RGSH+ +MFRLPFA G VFSA+MLD
Sbjct: 856 ITELTHATNMRFVQFNPHNAYSLAQSRFEKKERKRGSHMPFMFRLPFAQGGVFSANMLDR 915
Query: 727 LLYQAFVKDYMITFVRLLLGIDQAPGSGFLASIKITKEDMWIRTYGRLYQKLCSTSCEIP 786
LLYQA +K +++ VRLLLGIDQ G+L S IT +D+WIR YGRLYQKLCS+ +IP
Sbjct: 916 LLYQAIIKPFVVDLVRLLLGIDQHSDGGYLTSFVITSDDLWIRNYGRLYQKLCSSVADIP 975
Query: 787 IGIYRTQ 793
IGI+RT+
Sbjct: 976 IGIFRTK 982
Score = 130 bits (313), Expect = 7e-30
Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 548 RIVKGFPPVSPFIGVSPTLCFLLKEKKPLCCLQLAQVCEHCAYRNAKEYQWQNKTIILAA 607
++ + +P V +IG S T+C ++KE++ LCCL+L + C H + +A EYQW+N+ IILAA
Sbjct: 684 KLQRTYPQVRTYIGTSNTVCHMMKERRSLCCLKLDEKCAHKSATSAHEYQWRNRPIILAA 743
Query: 608 DYASNGIYNFIIPLRAHFRSKTTLNPIILLLERRP----DVAFLDAISYFPLVYWMLGTI 663
D S+G+YN +IPLRA++R L+PII+LLE + AFLDAISYFP VYWM G +
Sbjct: 744 DRTSSGMYNLVIPLRAYYRPVHDLHPIIILLELEEQDSLNDAFLDAISYFPDVYWMKGKV 803
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 832 TPVYSTSLADEARDNHIQQIER-AEIANLVRSRMESLNLTGVD-YDDVSEKRNSLSYVII 889
T S L ++ +D ++ R ++ + V++RM LN+ + S++++ +SYVII
Sbjct: 986 TKTVSLDLQEQCKDFENTEMGRNKDMYDHVKNRMRLLNIKDTHTLLEGSDEKSQISYVII 1045
Query: 890 NPSCDLNLQEGDIMNLV 906
NP+ DL L+ GDI+ ++
Sbjct: 1046 NPAQDLELESGDIVYVI 1062
>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
potassium channel Slo-2 protein.
Length = 1119
Score = 355 bits (872), Expect = 1e-97
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 5/291 (1%)
Query: 41 EQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDYYVVL 100
++L TW ERQK G +SS E HVVV TTL + I DFL EFYAHP Q +VL
Sbjct: 296 DELGQTWSERQKSGTDFSSWNGV-ESHVVVTITTLEVEFIRDFLEEFYAHPENQRIQIVL 354
Query: 101 LSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTA 160
LSP ELD RM+L++P+W RV Y++GS L+D DL RA + ++ACFIL+AR+ K A
Sbjct: 355 LSPAELDNQTRMLLKIPLWNNRVHYVRGSSLRDEDLERANVATSKACFILSARHVNRKVA 414
Query: 161 ADEHTILRSWAVKDFAPKVAQYVQIFRPENKLHVKFAEFVVCEDEFKYALLANNCTCPGA 220
DEHTILRSWA+KDFAP V QYVQIFR E K+H++ AE ++CEDEFKYALLANNC CPG
Sbjct: 415 TDEHTILRSWAIKDFAPNVKQYVQIFRAETKMHIEHAEVLICEDEFKYALLANNCICPGI 474
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST +TLL+HTSRG+EGQ+S E WH++YG SGNE+Y I + DS+FF EY GKSF+ SFH
Sbjct: 475 STFITLLMHTSRGEEGQKSTEPWHKVYGFHSGNEMYQIKVQDSKFFCEYVGKSFSSTSFH 534
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEEN 331
+H++YG+ L+ V P+ + LNPG HI++ TDT YYM +T EE+
Sbjct: 535 AHKEYGIGLIAVS----PDGDTSRMKLNPGSSHIIQPTDTVYYMGLTNEES 581
Score = 184 bits (449), Expect = 2e-46
Identities = 106/240 (44%), Positives = 145/240 (60%), Gaps = 21/240 (8%)
Query: 667 ITELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGSVFSASMLDT 726
ITEL+ ++NMRF+QF H+ Y+L S+ EK+E++RGSH+ +MFRLPFA G VFSA+MLD
Sbjct: 856 ITELTHATNMRFVQFNPHNAYSLAQSRFEKKERKRGSHMPFMFRLPFAQGGVFSANMLDR 915
Query: 727 LLYQAFVKDYMITFVRLLLGIDQAPGSGFLASIKITKEDMWIRTYGRLYQKLCSTSCEIP 786
LLYQA +K +++ VRLLLGIDQ G+L S IT +D+WIR YGRLYQKLCS+ +IP
Sbjct: 916 LLYQAIIKPFVVDLVRLLLGIDQHSDGGYLTSFVITSDDLWIRNYGRLYQKLCSSVADIP 975
Query: 787 IGIYRTQDTSMADASHHQEELDGGDFPACGRQEATSCLGGCYGERTPVYSTSLADEARDN 846
IGI+RT+ S +E C E T +G V + +D
Sbjct: 976 IGIFRTKKMDTKTVSLDLQE-------QCKDFENTE-MGRNKDMYDHVKNRMRLLNIKDT 1027
Query: 847 HIQQIERAEIANLVRSRMESLNLTGVDYDDVSEKRNSLSYVIINPSCDLNLQEGDIMNLV 906
H + A SR S L G S++++ +SYVIINP+ DL L+ GDI+ ++
Sbjct: 1028 HTFNWKYA-------SRCRSTVLEG------SDEKSQISYVIINPAQDLELESGDIVYVI 1074
Score = 130 bits (313), Expect = 7e-30
Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 548 RIVKGFPPVSPFIGVSPTLCFLLKEKKPLCCLQLAQVCEHCAYRNAKEYQWQNKTIILAA 607
++ + +P V +IG S T+C ++KE++ LCCL+L + C H + +A EYQW+N+ IILAA
Sbjct: 684 KLQRTYPQVRTYIGTSNTVCHMMKERRSLCCLKLDEKCAHKSATSAHEYQWRNRPIILAA 743
Query: 608 DYASNGIYNFIIPLRAHFRSKTTLNPIILLLERRP----DVAFLDAISYFPLVYWMLGTI 663
D S+G+YN +IPLRA++R L+PII+LLE + AFLDAISYFP VYWM G +
Sbjct: 744 DRTSSGMYNLVIPLRAYYRPVHDLHPIIILLELEEQDSLNDAFLDAISYFPDVYWMKGKV 803
>AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical
protein Y51A2D.19b protein.
Length = 1118
Score = 94.3 bits (224), Expect = 4e-19
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 21/290 (7%)
Query: 50 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-DYYVVLLSPMELDT 108
RQK GG Y + KH+VVC + D++ FL +F D VV L + D
Sbjct: 358 RQKYGGEYKGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDL 414
Query: 109 TMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTAADEHTILR 168
+ + + +V + G+ + DL R ++ +A+AC +LA + + A D I+R
Sbjct: 415 ELEGLFKRHF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMR 472
Query: 169 SWAVKDFAPKVAQYVQIFRPENKLHV--------KFAEFVVCEDEFKYALLANNCTCPGA 220
++K+++ + VQ+ + NK ++ K + V+C E K +A +C PG
Sbjct: 473 VISIKNYSSDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGF 532
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST++ L R + Q+ +W LY +G E+Y L S + G +F A
Sbjct: 533 STMMANLF-AMRSFKTSQTTPDWLNLYLCGAGMEMYTDTLSHS-----FVGMTFPEAVDL 586
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEE 330
+ G+ L+ + + E E I +NPGP +++ ++++ + +E
Sbjct: 587 LFNRLGLLLLAIELKD-EENKECNIAINPGPHIVIQPQTQGFFIAQSADE 635
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 712 PFAAGSVFSASMLDTLLYQAFVKDYMITFVRLLL 745
PFA G+ F+ S+LD+L+ + D +T +R L+
Sbjct: 961 PFACGTAFAISVLDSLMSTTYFNDSALTLIRTLV 994
>AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical
protein Y51A2D.19a protein.
Length = 1140
Score = 94.3 bits (224), Expect = 4e-19
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 21/290 (7%)
Query: 50 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-DYYVVLLSPMELDT 108
RQK GG Y + KH+VVC + D++ FL +F D VV L + D
Sbjct: 358 RQKYGGEYKGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDL 414
Query: 109 TMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTAADEHTILR 168
+ + + +V + G+ + DL R ++ +A+AC +LA + + A D I+R
Sbjct: 415 ELEGLFKRHF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMR 472
Query: 169 SWAVKDFAPKVAQYVQIFRPENKLHV--------KFAEFVVCEDEFKYALLANNCTCPGA 220
++K+++ + VQ+ + NK ++ K + V+C E K +A +C PG
Sbjct: 473 VISIKNYSSDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGF 532
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST++ L R + Q+ +W LY +G E+Y L S + G +F A
Sbjct: 533 STMMANLF-AMRSFKTSQTTPDWLNLYLCGAGMEMYTDTLSHS-----FVGMTFPEAVDL 586
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEE 330
+ G+ L+ + + E E I +NPGP +++ ++++ + +E
Sbjct: 587 LFNRLGLLLLAIELKD-EENKECNIAINPGPHIVIQPQTQGFFIAQSADE 635
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 712 PFAAGSVFSASMLDTLLYQAFVKDYMITFVRLLL 745
PFA G+ F+ S+LD+L+ + D +T +R L+
Sbjct: 983 PFACGTAFAISVLDSLMSTTYFNDSALTLIRTLV 1016
>AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1b protein.
Length = 1118
Score = 94.3 bits (224), Expect = 4e-19
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 21/290 (7%)
Query: 50 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-DYYVVLLSPMELDT 108
RQK GG Y + KH+VVC + D++ FL +F D VV L + D
Sbjct: 358 RQKYGGEYKGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDL 414
Query: 109 TMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTAADEHTILR 168
+ + + +V + G+ + DL R ++ +A+AC +LA + + A D I+R
Sbjct: 415 ELEGLFKRHF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMR 472
Query: 169 SWAVKDFAPKVAQYVQIFRPENKLHV--------KFAEFVVCEDEFKYALLANNCTCPGA 220
++K+++ + VQ+ + NK ++ K + V+C E K +A +C PG
Sbjct: 473 VISIKNYSSDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGF 532
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST++ L R + Q+ +W LY +G E+Y L S + G +F A
Sbjct: 533 STMMANLF-AMRSFKTSQTTPDWLNLYLCGAGMEMYTDTLSHS-----FVGMTFPEAVDL 586
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEE 330
+ G+ L+ + + E E I +NPGP +++ ++++ + +E
Sbjct: 587 LFNRLGLLLLAIELKD-EENKECNIAINPGPHIVIQPQTQGFFIAQSADE 635
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 712 PFAAGSVFSASMLDTLLYQAFVKDYMITFVRLLL 745
PFA G+ F+ S+LD+L+ + D +T +R L+
Sbjct: 961 PFACGTAFAISVLDSLMSTTYFNDSALTLIRTLV 994
>AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1a protein.
Length = 1140
Score = 94.3 bits (224), Expect = 4e-19
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 21/290 (7%)
Query: 50 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-DYYVVLLSPMELDT 108
RQK GG Y + KH+VVC + D++ FL +F D VV L + D
Sbjct: 358 RQKYGGEYKGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDL 414
Query: 109 TMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTAADEHTILR 168
+ + + +V + G+ + DL R ++ +A+AC +LA + + A D I+R
Sbjct: 415 ELEGLFKRHF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMR 472
Query: 169 SWAVKDFAPKVAQYVQIFRPENKLHV--------KFAEFVVCEDEFKYALLANNCTCPGA 220
++K+++ + VQ+ + NK ++ K + V+C E K +A +C PG
Sbjct: 473 VISIKNYSSDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGF 532
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST++ L R + Q+ +W LY +G E+Y L S + G +F A
Sbjct: 533 STMMANLF-AMRSFKTSQTTPDWLNLYLCGAGMEMYTDTLSHS-----FVGMTFPEAVDL 586
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEE 330
+ G+ L+ + + E E I +NPGP +++ ++++ + +E
Sbjct: 587 LFNRLGLLLLAIELKD-EENKECNIAINPGPHIVIQPQTQGFFIAQSADE 635
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 712 PFAAGSVFSASMLDTLLYQAFVKDYMITFVRLLL 745
PFA G+ F+ S+LD+L+ + D +T +R L+
Sbjct: 983 PFACGTAFAISVLDSLMSTTYFNDSALTLIRTLV 1016
>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
protein Y51A2D.19c protein.
Length = 1131
Score = 88.6 bits (210), Expect = 2e-17
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 21/290 (7%)
Query: 50 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-DYYVVLLSPMELDT 108
RQK GG Y + KH+VVC + D++ FL +F D VV L + D
Sbjct: 358 RQKYGGEYKGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDL 414
Query: 109 TMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTAADEHTILR 168
+ + + +V + G+ + DL R ++ +A+AC +LA + + A D I+R
Sbjct: 415 ELEGLFKRHF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMR 472
Query: 169 SWAVKDFAPKVAQYVQIFRPENKLHV--------KFAEFVVCEDEFKYALLANNCTCPGA 220
++K+++ + VQ+ + NK ++ K + V+C E K +A +C PG
Sbjct: 473 VISIKNYSSDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGF 532
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST++ L + +P W Y + +G E+Y L S + SF A+
Sbjct: 533 STMMANLFAMRSFKTSPHTP-LWLNDYLRGAGMEMYTESLSPS-----FANMSFPEAANL 586
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEE 330
+ G+ L+ + + E E I +NPGP +++ ++++ + +E
Sbjct: 587 LFNRLGLLLLAIELKD-EENKECNIAINPGPHIVIQPQTQGFFIAQSADE 635
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 712 PFAAGSVFSASMLDTLLYQAFVKDYMITFVRLLL 745
PFA G+ F+ S+LD+L+ + D +T +R L+
Sbjct: 974 PFACGTAFAISVLDSLMSTTYFNDSALTLIRTLV 1007
>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1c protein.
Length = 1131
Score = 88.6 bits (210), Expect = 2e-17
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 21/290 (7%)
Query: 50 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-DYYVVLLSPMELDT 108
RQK GG Y + KH+VVC + D++ FL +F D VV L + D
Sbjct: 358 RQKYGGEYKGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDL 414
Query: 109 TMRMILQVPIWAQRVIYIQGSCLKDTDLIRARMNEAEACFILAARNYADKTAADEHTILR 168
+ + + +V + G+ + DL R ++ +A+AC +LA + + A D I+R
Sbjct: 415 ELEGLFKRHF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMR 472
Query: 169 SWAVKDFAPKVAQYVQIFRPENKLHV--------KFAEFVVCEDEFKYALLANNCTCPGA 220
++K+++ + VQ+ + NK ++ K + V+C E K +A +C PG
Sbjct: 473 VISIKNYSSDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGF 532
Query: 221 STLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFH 280
ST++ L + +P W Y + +G E+Y L S + SF A+
Sbjct: 533 STMMANLFAMRSFKTSPHTP-LWLNDYLRGAGMEMYTESLSPS-----FANMSFPEAANL 586
Query: 281 SHRKYGVALVGVRPAELPEFYEDTILLNPGPRHIMKSTDTCYYMSITKEE 330
+ G+ L+ + + E E I +NPGP +++ ++++ + +E
Sbjct: 587 LFNRLGLLLLAIELKD-EENKECNIAINPGPHIVIQPQTQGFFIAQSADE 635
Score = 33.5 bits (73), Expect = 0.81
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 712 PFAAGSVFSASMLDTLLYQAFVKDYMITFVRLLL 745
PFA G+ F+ S+LD+L+ + D +T +R L+
Sbjct: 974 PFACGTAFAISVLDSLMSTTYFNDSALTLIRTLV 1007
>Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical protein
F43C1.4 protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 1018 PEETPRMALEPFQDIAAALPSTSGGSTMPVNVTPDPQHLQGTIV 1061
P ++P MA F+ + +PSTSGGST + +P P+ + I+
Sbjct: 146 PNDSPMMA--DFKFDPSDIPSTSGGSTQRLERSPSPKLAESKIL 187
>AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear receptor
NHR-20 protein.
Length = 274
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 1018 PEETPRMALEPFQDIAAALPSTSGGSTMPVNVTPDPQHLQGTIV 1061
P ++P MA F+ + +PSTSGGST + +P P+ + I+
Sbjct: 146 PNDSPMMA--DFKFDPSDIPSTSGGSTQRLERSPSPKLAESKIL 187
>AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear receptor
NHR-20 protein.
Length = 454
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 1018 PEETPRMALEPFQDIAAALPSTSGGSTMPVNVTPDPQHLQGTIV 1061
P ++P MA F+ + +PSTSGGST + +P P+ + I+
Sbjct: 143 PNDSPMMA--DFKFDPSDIPSTSGGSTQRLERSPSPKLAESKIL 184
>Z48583-2|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 827 CYGERTPVYSTSLADEARDNHIQQIERAEIANLVRSRMESLNLTGVDYDDVSEKRNSLSY 886
CY P + DE D IQ+++ A N+++ ++ +T + Y + + + S
Sbjct: 270 CYIVIQPRGGLTYTDEEIDFSIQEVDSASRVNVLQPKIHPFKITPIVYVNPTHSTETNS- 328
Query: 887 VIINPSCDLNLQEGDIMNLVIDAD 910
I+ + + ++ GD + +D D
Sbjct: 329 --IDIAMEPTIRRGDALKTAVDDD 350
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,394,313
Number of Sequences: 27539
Number of extensions: 1072963
Number of successful extensions: 2303
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2238
Number of HSP's gapped (non-prelim): 48
length of query: 1061
length of database: 12,573,161
effective HSP length: 89
effective length of query: 972
effective length of database: 10,122,190
effective search space: 9838768680
effective search space used: 9838768680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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