GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000704-TA|BGIBMGA000704-PA|IPR005123|2OG-Fe(II)
oxygenase, IPR001006|Procollagen-lysine 5-dioxygenase,
IPR006620|Prolyl 4-hydroxylase, alpha subunit
         (271 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    26   1.00 
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   9.3  

>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 1.00
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 101 FPLMSDRFCDEWIAIMEAYGKWSDGTNND 129
           F L S   C+EWIA  E + K S   N+D
Sbjct: 73  FQLQSAYHCNEWIAGNECHLKCSSLVNDD 101


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 4/32 (12%)

Query: 96  TDVYWFPLMSDRF---CDEWIAIMEAYGKWSD 124
           T   + PL +DR+   C EW A+MEA   ++D
Sbjct: 168 TVAIFVPLPADRWPRVC-EWFAVMEALPYYND 198


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.446 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,072
Number of Sequences: 2123
Number of extensions: 14062
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 2
length of query: 271
length of database: 516,269
effective HSP length: 63
effective length of query: 208
effective length of database: 382,520
effective search space: 79564160
effective search space used: 79564160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)