Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000703-TA|BGIBMGA000703-PA|undefined
         (454 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   1.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   4.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   4.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   4.4  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 194 QLYYTKIYL--DKDLRESLKITLDHKSEIFQNLNGALSDVQLRANTTEEWPYIENVVTKL 251
           Q Y T  +L  D D  ++ +    H +E++ ++         R +  +  PY+ +    +
Sbjct: 17  QNYKTNPFLASDCDKNQNTEHNYTHNNEMYHSVKEEPIYESCRFSINQ--PYLNHFDNSV 74

Query: 252 RPLIVHGNGPVKNTLN--HYGNYLAKSWSVNEGCVLCKEKKIQLKEDNLPSVMMAVFIEQ 309
            P++ H      +  +    G Y      +NE  +   E K+  K+D+ P++   +   Q
Sbjct: 75  TPMVNHDFTQHLSQYDTCQQGIYPENKTLINETSLQLDENKLDKKDDDSPALRALLTRPQ 134

Query: 310 A 310
           A
Sbjct: 135 A 135


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 164 PYLNSGGFIGYLPEIYEIINSN 185
           PY N+ GF+ Y     EI+N +
Sbjct: 299 PYTNATGFLAYYEICPEILNKD 320


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory
          receptor candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 7  MGLFIQLILCVFVILFNSHTQAT 29
          + L +Q+IL V +++ N HT  T
Sbjct: 56 INLLVQIILDVILLILNVHTILT 78


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory
          receptor candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 7  MGLFIQLILCVFVILFNSHTQAT 29
          + L +Q+IL V +++ N HT  T
Sbjct: 56 INLLVQIILDVILLILNVHTILT 78


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 7   MGLFIQLILCVFVILFNSHTQAT 29
           + L +Q+IL V +++ N HT  T
Sbjct: 376 INLLVQIILDVILLILNVHTILT 398


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.138    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,182
Number of Sequences: 317
Number of extensions: 4947
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 5
length of query: 454
length of database: 114,650
effective HSP length: 59
effective length of query: 395
effective length of database: 95,947
effective search space: 37899065
effective search space used: 37899065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)