GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000701-TA|BGIBMGA000701-PA|IPR011614|Catalase,
N-terminal, IPR002226|Catalase
         (507 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   5.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   5.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   5.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   5.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   5.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   5.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   5.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   5.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   8.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   8.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   8.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   8.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 12  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 71

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 72  LSTNGAPPRSTP 83


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL + +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 325 AEVEQIAFSPSNLVPGIEPSPD 346
           A++ ++A SP++  P  EP P+
Sbjct: 20  AKIVKVAASPTSANPDEEPDPE 41


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 325 AEVEQIAFSPSNLVPGIEPSPD 346
           A++ ++A SP++  P  EP P+
Sbjct: 20  AKIVKVAASPTSANPDEEPDPE 41


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 339 PGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIP-------VNCPYKVAVSTYQRDGPQA 391
           P   P+P   LQ  +  Y+     RL   +LQ P        +C Y  + S+     PQ 
Sbjct: 56  PYAAPAPGHGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQD 115

Query: 392 IHNQDDCPNYFP 403
           +      P   P
Sbjct: 116 LSTNGAPPRSTP 127


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 295 FDLTKIWPHAEYPLIPVGKLVLDRNPKNYFAEVEQIAFSPSNLVPGIEPSP 345
           F   + W   E P  P     +   P+  +   E  +   +  + GI+PSP
Sbjct: 125 FTTERNWEIREKPYTPPRLPTVYGKPEQNYEVDESASVMTNGRIHGIQPSP 175


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,453
Number of Sequences: 317
Number of extensions: 6230
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 12
length of query: 507
length of database: 114,650
effective HSP length: 60
effective length of query: 447
effective length of database: 95,630
effective search space: 42746610
effective search space used: 42746610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)