GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000701-TA|BGIBMGA000701-PA|IPR011614|Catalase,
N-terminal, IPR002226|Catalase
         (507 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   4.5  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   6.0  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 136 TDDGVWDLVGNNTPIFFIRDPTLFPSFI 163
           T +  W+ V  +TP+ F+ D   F + +
Sbjct: 87  TSESQWEDVTGSTPLTFVNDTVSFTTTV 114


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 438 DNFSQATALYKQVFDDAAKQRAIANIVD 465
           D F   T+ YK + +D A+    A++ D
Sbjct: 407 DGFESVTSQYKNIREDDARHIPHASVTD 434


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,193
Number of Sequences: 429
Number of extensions: 7976
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 507
length of database: 140,377
effective HSP length: 61
effective length of query: 446
effective length of database: 114,208
effective search space: 50936768
effective search space used: 50936768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)