Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000701-TA|BGIBMGA000701-PA|IPR011614|Catalase,
N-terminal, IPR002226|Catalase
(507 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 426 e-119
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 417 e-117
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 399 e-111
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 389 e-108
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 31 1.4
At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon cat... 31 2.4
At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containi... 30 3.1
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 4.2
At1g75640.1 68414.m08788 leucine-rich repeat family protein / pr... 29 5.5
At2g47200.1 68415.m05895 expressed protein 29 9.6
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 9.6
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 426 bits (1049), Expect = e-119
Identities = 220/480 (45%), Positives = 302/480 (62%), Gaps = 8/480 (1%)
Query: 20 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 79
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRERIPERVVHA+GA A
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVVHARGASA 71
Query: 80 FGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDG 139
G+FEVTHDIT+ ++A G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +G
Sbjct: 72 KGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREG 131
Query: 140 VWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLFG 199
+DLVGNN P+FF+RD FP +H K NP +H+++ DF + PE++H +LF
Sbjct: 132 NFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFD 191
Query: 200 DRGIPDGYRHMNGYGSHTFKLVNSQGVGYWVKFHYKTNQGIKNLSVDKAGELASTDPDYS 259
D GIP YRHM G G +T+ L+N G ++VKFH+K GIK LS ++A + + ++
Sbjct: 192 DLGIPQDYRHMEGAGVNTYMLINKAGKAHYVKFHWKPTCGIKCLSDEEAIRVGGANHSHA 251
Query: 260 IRDLYNSIAKGDYPSWTFYIQVMTMAQAESCKFNPFDLTKIWPHAEYPLIPVGKLVLDRN 319
+DLY+SIA G+YP W ++QVM A + F+P D+TKIWP PL PVG+LVL++N
Sbjct: 252 TKDLYDSIAAGNYPQWNLFVQVMDPAHEDKFDFDPLDVTKIWPEDILPLQPVGRLVLNKN 311
Query: 320 PKNYFAEVEQIAFSPSNLVPGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIPVNCPYKV 379
N+F E EQIAF P+ +VPGI S DK+LQ R+F+Y+D+ RHRLG NYLQ+PVN P K
Sbjct: 312 IDNFFNENEQIAFCPALVVPGIHYSDDKLLQTRIFSYADSQRHRLGPNYLQLPVNAP-KC 370
Query: 380 AVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYNVGGDVDRYDSGQTEDN 439
A DG ++D+ NYFP+ P P G+ ++ G+ E+N
Sbjct: 371 AHHNNHHDGFMNFMHRDEEVNYFPSRLD-PVRHAEKYPTTP-IVCSGNREKCFIGK-ENN 427
Query: 440 FSQATALYKQVFDDAAKQRAIANIVDHLKDAAAFIQERAIKI--FSQVHPELGNKVAAGL 497
F Q Y+ +D ++R + V+ L + + R+I I +SQ LG K+A L
Sbjct: 428 FKQPGERYRS-WDSDRQERFVKRFVEALSEPRVTHEIRSIWISYWSQADKSLGQKLATRL 486
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 417 bits (1028), Expect = e-117
Identities = 213/480 (44%), Positives = 302/480 (62%), Gaps = 8/480 (1%)
Query: 20 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 79
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRERIPERVVHA+GA A
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASA 71
Query: 80 FGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDG 139
G+FEVTHDI+ + A + G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +G
Sbjct: 72 KGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREG 131
Query: 140 VWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLFG 199
+DLVGNN P+FFIRD FP +H K NP +H+++ DF + PE+++ +LF
Sbjct: 132 NFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLNMFTFLFD 191
Query: 200 DRGIPDGYRHMNGYGSHTFKLVNSQGVGYWVKFHYKTNQGIKNLSVDKAGELASTDPDYS 259
D GIP YRHM+G G +T+ L+N G ++VKFH+K G+K+L + A + T+ ++
Sbjct: 192 DIGIPQDYRHMDGSGVNTYMLINKAGKAHYVKFHWKPTCGVKSLLEEDAIRVGGTNHSHA 251
Query: 260 IRDLYNSIAKGDYPSWTFYIQVMTMAQAESCKFNPFDLTKIWPHAEYPLIPVGKLVLDRN 319
+DLY+SIA G+YP W +IQ++ A + F+P D+TK WP PL PVG++VL++N
Sbjct: 252 TQDLYDSIAAGNYPEWKLFIQIIDPADEDKFDFDPLDVTKTWPEDILPLQPVGRMVLNKN 311
Query: 320 PKNYFAEVEQIAFSPSNLVPGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIPVNCPYKV 379
N+FAE EQ+AF P+ +VPGI S DK+LQ R+F+Y+DT RHRLG NYLQ+PVN P K
Sbjct: 312 IDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAP-KC 370
Query: 380 AVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYNVGGDVDRYDSGQTEDN 439
A +G ++D+ NYFP+ + + + P G +R + E+N
Sbjct: 371 AHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYP--TPPAVCSGKRERCII-EKENN 427
Query: 440 FSQATALYKQVFDDAAKQRAIANIVDHLKDAAAFIQERAIKI--FSQVHPELGNKVAAGL 497
F + Y+ F ++R I +D L D + R+I I +SQ LG K+A+ L
Sbjct: 428 FKEPGERYR-TFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRL 486
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 399 bits (983), Expect = e-111
Identities = 208/486 (42%), Positives = 297/486 (61%), Gaps = 7/486 (1%)
Query: 14 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 73
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 74 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 133
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD RGFAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 134 FYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQ 193
FYT +G +DLVGNNTP+FFIRD FP +H K NP T++++ D+++ PE++
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLT 185
Query: 194 LLYLFGDRGIPDGYRHMNGYGSHTFKLVNSQGVGYWVKFHYKTNQGIKNLSVDKAGELAS 253
++F D GIP YRHM G+G HT+ L+ G +VKFH+K GIKNL+ ++A +
Sbjct: 186 WCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVGG 245
Query: 254 TDPDYSIRDLYNSIAKGDYPSWTFYIQVMTMAQAESCKFNPFDLTKIWPHAEYPLIPVGK 313
+ ++ +DL+++IA G+YP W +IQ M A + F+P D+TKIWP PL PVG+
Sbjct: 246 ANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVGR 305
Query: 314 LVLDRNPKNYFAEVEQIAFSPSNLVPGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIPV 373
LVL+R N+F E EQ+AF+P +VPGI S DK+LQ R+FAY DT RHRLG NYLQ+PV
Sbjct: 306 LVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLPV 365
Query: 374 NCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYNVGGDVDRYDS 433
N P K A +G ++D+ NY+P+ F P C A+++ N +
Sbjct: 366 NAP-KCAHHNNHHEGFMNFMHRDEEINYYPSKFD-PVRC--AEKVPTPTNSYTGIRTKCV 421
Query: 434 GQTEDNFSQATALYKQVFDDAAKQRAIANIVDHLKDAAAFIQERAIKI--FSQVHPELGN 491
+ E+NF QA Y+ D + R + V+ L + + R I I +SQ LG
Sbjct: 422 IKKENNFKQAGDRYRSWAPD-RQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 480
Query: 492 KVAAGL 497
K+A+ L
Sbjct: 481 KLASRL 486
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 389 bits (958), Expect = e-108
Identities = 186/399 (46%), Positives = 260/399 (65%), Gaps = 2/399 (0%)
Query: 14 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 73
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 74 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 133
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD RGFAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 134 FYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQ 193
FYT +G +DLVGNNTP+FFIRD FP +H K NP T++++ D+++ PE++
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLT 185
Query: 194 LLYLFGDRGIPDGYRHMNGYGSHTFKLVNSQGVGYWVKFHYKTNQGIKNLSVDKAGELAS 253
++F D GIP YRHM G+G HT+ L+ G +VKFH+K GIKNL+ ++A +
Sbjct: 186 WCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVGG 245
Query: 254 TDPDYSIRDLYNSIAKGDYPSWTFYIQVMTMAQAESCKFNPFDLTKIWPHAEYPLIPVGK 313
+ ++ +DL+++IA G+YP W +IQ M A + F+P D+TKIWP PL PVG+
Sbjct: 246 ANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVGR 305
Query: 314 LVLDRNPKNYFAEVEQIAFSPSNLVPGIEPSPDKMLQGRLFAYSDTHRHRLGANYLQIPV 373
LVL+R N+F E EQ+AF+P +VPGI S DK+LQ R+FAY DT RHRLG NYLQ+PV
Sbjct: 306 LVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLPV 365
Query: 374 NCPYKVAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQEC 412
N P K A +G ++D+ NY+P+ F P C
Sbjct: 366 NAP-KCAHHNNHHEGFMNFMHRDEEINYYPSKFD-PVRC 402
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 84 EVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDL 143
E D+ K ++ S+ K+T + +GG + KF T+DG++D+
Sbjct: 224 EEAEDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEK-----AKELGTKFLTEDGLFDI 278
Query: 144 VGNNTPI 150
+ ++ P+
Sbjct: 279 IRSSKPV 285
>At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon
catalytic subunit, putative similar to SP|Q07864 DNA
polymerase epsilon, catalytic subunit A (EC 2.7.7.7)
(DNA polymerase II subunit A) {Homo sapiens}; contains
Pfam profiles: PF03175 DNA polymerase type B, organellar
and viral, PF00136 DNA polymerase family B, PF03104 DNA
polymerase family B, exonuclease domain
Length = 2271
Score = 30.7 bits (66), Expect = 2.4
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 379 VAVSTYQRDGPQAIHNQDDCPNYFPNSFSGPQECPRAQRLQPRYNVGGDVDRYDSGQTED 438
V VSTY QA CPN + + P++ + Q L+ +GG V+ +SGQ D
Sbjct: 483 VEVSTYLPQA-QAYKANVVCPN---KNQADPEKFYQNQLLESETYIGGHVECLESGQLID 538
Query: 439 NFSQATALYKQVFDDAAKQRAIANIVDHLKD 469
N + Y + + +I+N D +KD
Sbjct: 539 NLGRDLE-YAITVEGKMRMDSISN-YDEVKD 567
>At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 440 FSQATALYKQV------FDDAAKQRAIANIVDHLKDAAAF-IQERAIKIFSQVHPELGNK 492
FS AL+KQV D + + I +V K +AF + E A ++HP++ N+
Sbjct: 98 FSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNR 157
Query: 493 VAAGL 497
+ AGL
Sbjct: 158 LLAGL 162
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 17 TLKDSPGFITTKSGAPVGIKTAIQTVG 43
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At1g75640.1 68414.m08788 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1140
Score = 29.5 bits (63), Expect = 5.5
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 239 GIKNLS-VDKAGELASTDPDYSIRDLYNSIAKGDYPSW 275
G+ N + + K A +P+ I D++ + GD+P+W
Sbjct: 296 GVNNFTGIAKPSNAACVNPNLEILDIHENRINGDFPAW 333
>At2g47200.1 68415.m05895 expressed protein
Length = 88
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 432 DSGQTEDNFSQATALYKQVFDDAAKQRAIANIVD--HLKDAAAFIQE 476
D +T D+ S A LY+ + D R ++VD HL D FI E
Sbjct: 20 DEPETSDSSSSAAKLYRNIVGDENVTRKRISVVDTSHLGDNHEFIIE 66
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 17 TLKDSPGFITTKSGAPVGIKTAIQTVG 43
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.137 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,940,793
Number of Sequences: 28952
Number of extensions: 589834
Number of successful extensions: 1180
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1174
Number of HSP's gapped (non-prelim): 11
length of query: 507
length of database: 12,070,560
effective HSP length: 84
effective length of query: 423
effective length of database: 9,638,592
effective search space: 4077124416
effective search space used: 4077124416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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