Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000700-TA|BGIBMGA000700-PA|undefined
         (203 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   0.74 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   3.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.1  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol
          oxidase subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 19 VKENQLPERCSGLVKDIREKFGKDSNE 45
          V  N LPER   +   I  +FG+ +NE
Sbjct: 30 VPNNFLPERYKPIGVQIANRFGEQANE 56


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)

Query: 75  LEPLMSKNKRNSVASPN 91
           LEPL S N   SVA+PN
Sbjct: 492 LEPLYSGNLAVSVATPN 508


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 32 VKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERK 74
          +K  R+  GK  ++ +DK     +  +N  + DK   +E+ +K
Sbjct: 57 MKHKRQTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSKK 99


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 32 VKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERK 74
          +K  R+  GK  ++ +DK     +  +N  + DK   +E+ +K
Sbjct: 5  MKHKRQTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSKK 47


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 32  VKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERK 74
           +K  R+  GK  ++ +DK     +  +N  + DK   +E+ +K
Sbjct: 188 MKHKRQTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSKK 230


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 86  SVASPNLIGHESDPKRPWRTNSNKEKLLRIDNELKRHLDKATDLIAPLSDGEMSDIIKQS 145
           + AS +       P      +  + KL +I     + L+K        +   M+ + +QS
Sbjct: 125 AAASGSAAAQAGQPDNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQS 184

Query: 146 REESITTRPVEYVRLVDTVEEAKKTLFNFQYRAVCNSTATAILR 189
           R   IT + +E  R+V  + +   ++     ++ C   A  ILR
Sbjct: 185 RTRPITPKEIE--RMVQIIHKKFSSIQMQLKQSTCE--AVMILR 224


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 37  EKFGKDSNEDEDKVESVDETY 57
           EKF  +   DE+K + V  TY
Sbjct: 394 EKFDPERFSDENKAKIVPGTY 414


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.128    0.350 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,665
Number of Sequences: 317
Number of extensions: 1833
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 203
length of database: 114,650
effective HSP length: 54
effective length of query: 149
effective length of database: 97,532
effective search space: 14532268
effective search space used: 14532268
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)
S2: 41 (20.6 bits)