Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000700-TA|BGIBMGA000700-PA|undefined
(203 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 33 0.039
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 32 0.068
SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces ... 32 0.068
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 0.48
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 28 0.83
SPBC13G1.13 |tfb2|SPBC31F10.01|transcription factor TFIIH comple... 28 1.1
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 28 1.1
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 27 1.5
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 27 2.5
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.5
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 27 2.5
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 3.4
SPBC1711.06 |rpl401|rpl4-1, rpl4|60S ribosomal protein L2|Schizo... 26 3.4
SPBP8B7.03c |rpl402|rpl4-2, rpl4|60S ribosomal protein L2|Schizo... 26 3.4
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 26 3.4
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 26 3.4
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 26 3.4
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 3.4
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 26 3.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 26 4.4
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 26 4.4
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.4
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 4.4
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 5.9
SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr... 25 5.9
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 25 5.9
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 25 5.9
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 5.9
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 7.8
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 7.8
SPCC16A11.07 |coq10||ubiquinone binding protein Coq10|Schizosacc... 25 7.8
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 25 7.8
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 25 7.8
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 32.7 bits (71), Expect = 0.039
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 32 VKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 91
+KD K++++ D + + YE+ +QL++ K+ L K + SV
Sbjct: 1194 LKDTNGVLEKNASDFID-FQGIKSRYEHKISDLLNQLQKERCKVGLLKQKTENRSVTQHT 1252
Query: 92 LIGHESDPKRPWRTNSNKEKLL-------RIDNELKRHLDKATDLIAPLSDGEMSDIIKQ 144
L G+ P + + + K + +IDN+L + + K+ D + + E+S++
Sbjct: 1253 LDGNSPHPSFEEKHSGDPLKRIDGNNDDRKIDNKLLKTISKSLDALQLTVEEELSNLYSL 1312
Query: 145 SREESITTRPVEYVRLVDTVEEAKKTLFNFQYR 177
S++ S T + +E+ TL + R
Sbjct: 1313 SKDLSFTDISGHIPNSIRKLEKGLSTLSELKER 1345
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 31.9 bits (69), Expect = 0.068
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 37 EKFGKDSNEDEDKVESVDETYENPYIVDKSQLEE--IERKLEPLMSKNKRNSVASPNLIG 94
E F K ++ +K +S+ ETYE K +LEE +E ++ +R+ +A+ N
Sbjct: 51 EAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEANTASYRNRGERSELAASNNQV 110
Query: 95 HESDPKRPWRTNSNKE 110
D + P +T S +
Sbjct: 111 THIDQEHPSQTKSTSQ 126
>SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 31.9 bits (69), Expect = 0.068
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 4 DEEKSKIAKLLHDVAVKE--NQLPERCSGLVKDIR---EKFGKDSNEDEDKVESV---DE 55
D+ K + + +VA + +Q + + ++D++ EK+ KD E++ K SV DE
Sbjct: 90 DQRLRKKKQTIQNVAFSDYHSQASKDYNRGIRDLKPDYEKYDKDKKEEKSKSRSVALYDE 149
Query: 56 TYENPYIVDKSQLEEIERKLEPLMSKNKR 84
++ +K E +ER +E + +++R
Sbjct: 150 AERLDWVSNKPDKEHVERLVESIKKQDQR 178
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.48
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 20 KENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV-----DKSQLEEIERK 74
KE++ + L KD+ EK K +NED K E+ + E I +K+ +E E K
Sbjct: 424 KESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDK 483
Query: 75 LEPLMSK 81
+E SK
Sbjct: 484 VEETESK 490
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 28.3 bits (60), Expect = 0.83
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 85 NSVASPNLIGHESDPKRPWRTNSNKEKLL--RIDNELKRHLDKATDLIAPLS 134
+SVA N I E+ P+ P R + + E L ++DNE +R + TDL+ P S
Sbjct: 632 SSVAKSNNI--ENSPQLPERYDFSLELGLNSQLDNEERRDIPLMTDLVMPSS 681
>SPBC13G1.13 |tfb2|SPBC31F10.01|transcription factor TFIIH complex
subunit Tfb2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 447
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 29 SGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLE 69
+GL D R GK S D+DK + ET Y S L+
Sbjct: 270 TGLTTDYRSLHGKQSENDDDKGFIIVETNYRLYAYTSSPLQ 310
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 45 EDEDK--VES-VDETYENPYIVDKSQLEEIERKLEP 77
EDEDK +++ +D Y NPY +K++ E++E P
Sbjct: 489 EDEDKRFIQACIDAGYGNPYNYEKNEPEQLEEPDRP 524
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 87 VASPNLIGHESDPKRPWRTNSNKEKL--LRIDNELKRHL 123
V +PN++ ++P RP+ TN+ E+L L + + L R++
Sbjct: 558 VQNPNILPSSTNPTRPFTTNTLDEELDMLMVCHHLSRNV 596
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 36 REKFGKDSNEDEDKVE--SVDETYENPYIVDKSQLEEI 71
REK K SN+DE K++ + +E P +D+ + ++I
Sbjct: 831 REKASKGSNDDEMKIDKKTTEEKEATPMEMDEEKSQDI 868
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 48 DKVESVDETYENPYIVDKSQLEEIERKLEPLMSKN 82
+K ESVD ENP + + I+ +L +MSK+
Sbjct: 13 EKKESVDVKRENPSFTNSIKALPIQSELSAMMSKD 47
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 2.5
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 37 EKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK---NKRNSVAS---P 90
EK K+ +D+D E ++T +N + K++++ + PL + +++A P
Sbjct: 186 EKEEKEGKDDKDDKEDSNDT-KNDKKISKNEVDSSLIEASPLTGQVPPKFLDTIAIFPLP 244
Query: 91 NLIGHESDPKRPWRTNSNKE 110
NL+G + PKR R +E
Sbjct: 245 NLLGFSNTPKRLSRFFKRRE 264
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 3.4
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 45 EDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKR 101
+++ K + D+ E + DK+Q++EIE+ + + + SP L +P R
Sbjct: 272 KEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEVDEEPVSEPTTSPILPPKNQEPIR 328
>SPBC1711.06 |rpl401|rpl4-1, rpl4|60S ribosomal protein
L2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 3.4
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 55 ETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKEKLLR 114
ET P++ ++ R + ++KNKR A GH++ + W T ++ R
Sbjct: 20 ETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAE-SWGTGRALARIPR 78
Query: 115 I 115
+
Sbjct: 79 V 79
>SPBP8B7.03c |rpl402|rpl4-2, rpl4|60S ribosomal protein
L2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 3.4
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 55 ETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKEKLLR 114
ET P++ ++ R + ++KNKR A GH++ + W T ++ R
Sbjct: 20 ETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAE-SWGTGRALARIPR 78
Query: 115 I 115
+
Sbjct: 79 V 79
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.2 bits (55), Expect = 3.4
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 5 EEKSKIAKLLHDVAVKENQLPERCSGLVKDIRE--KFGKDSNEDEDKVESVDETYENPYI 62
+ K+ I K L ++ N P ++++ K K+SN + + V E +N
Sbjct: 122 KSKNYIKKSLQEIVYLTNMQPNVSWNVLQEPTRGIKVPKESNNTQQNNQFVMEPSQNKGN 181
Query: 63 VDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHE 96
V+ + E+E M+K + + S +L+ E
Sbjct: 182 VNDANFFEVEYARNENMNKLSSSELISDDLLEDE 215
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 260
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 41 KDSNEDE--DKVESVDETYENPYIVDKSQLEEIER 73
K SNE + V+ + EN YIVDK ++ E+++
Sbjct: 24 KHSNEKKYLKSVKGKNNENENSYIVDKKRMNELKK 58
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 5 EEKSKIAKLLHDVA--VKENQLPERCSGLVKDIREKFGKDSNE 45
E+++ + KL+ D EN P CS + + E F K+S++
Sbjct: 475 EDRALLFKLVEDACSVADENSAPILCSKFLFPVIESFSKESDD 517
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 133 LSDGEMSDIIKQSR---EESITTRPVEYVRLVDTVEEAKKTLFNFQYRAVCNSTA 184
++D E+ D++ + R EE +T + +RL+ T EA T + + ++C + A
Sbjct: 762 IADLEIKDLLVRKRLLHEEPMTKLDLSTLRLIRTDSEAFDTFVSDELNSLCATNA 816
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 79 MSKNKRNSVASPNLIGHESDPKRPWRTNSNKEKLLRIDNELKRHLDKATDLIAPLSDGEM 138
+S++ R S A P G ES + +E+ D+E + + + L+
Sbjct: 290 LSQDTRESTAEPRAAGEESASEEEEEEEEEEEEENEADDETREN-KRQNRLVREFISELE 348
Query: 139 SDIIKQSREESITTRPV 155
S I K+ ++ T P+
Sbjct: 349 SSIQKRRKDADEATNPI 365
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 25.8 bits (54), Expect = 4.4
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Query: 36 REKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGH 95
R + GK + + K+ES T + + + K+E + R+ ASP +
Sbjct: 1228 RRQSGKPNVKSAQKIESATRTPSPAISESRKKPSSKDTKIETPSREQSRSQTASP--VKS 1285
Query: 96 ESDPKRPWRTNSNKEKLLRIDNELKRHLDKATDLIAPLSDGEMSDIIKQSREESITTRPV 155
E D K + + +++H+ + + L E+ ++ E +TT
Sbjct: 1286 EKDDGNVSLNAEQKARCKELMYPVRKHMKRLRKDSSGLGRAELVKLL----TECLTTIGK 1341
Query: 156 EYVRLV-DTVEEAKKTL 171
+ V DT E K T+
Sbjct: 1342 HIEKTVNDTPSEEKATV 1358
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 9 KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETY 57
K+ LLH++ VK+ LPE L+K + + E+K +S+ T+
Sbjct: 420 KLRLLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTH 468
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.8 bits (54), Expect = 4.4
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 4 DEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV 63
D K+ ++K H A E Q G ++ E+ D +EDED+ E D N +++
Sbjct: 178 DTSKNGLSKKQHSEAQPEVQ------GNDDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLL 231
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 4.4
Identities = 25/134 (18%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
Query: 11 AKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEE 70
AK + V K N+L K ++EK S +D + E E+ Y + S++
Sbjct: 50 AKNMDSVVQKLNELQNNVVAFQKLLQEKTPLSSIQDLEGFREFMENLEHRYEMTVSEVRR 109
Query: 71 IERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKEKLLRIDNELKRHLDKATDLI 130
+ ++ L + + + I K ++ +L+ +EL++ + + ++L
Sbjct: 110 LSHEVNDLQTDRENLKHQFEDQI-----EKLNSEISNQNSLILQKKDELEKSIQRCSELE 164
Query: 131 APLSDGEMSDIIKQ 144
++ E + I+Q
Sbjct: 165 EKINSLESAQSIEQ 178
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.4 bits (53), Expect = 5.9
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 4 DEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV 63
+ +S + KL +D N L + ++ D++ + KD +++ +E ET N Y
Sbjct: 559 ESSQSSLDKLRNDAEENRNILSSKLK-VLSDLKGE-KKDVSKN---IERKKETVHNTYRN 613
Query: 64 DKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESD 98
S ++E L S R +V HESD
Sbjct: 614 LMSNRTKLEEMKASLSSSRSRGNVLESLQRLHESD 648
>SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 36 REKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASP 90
R + + + +DKV ++ ++ PY+ + L R ++ L +N SV SP
Sbjct: 216 RRYYDIEERKSQDKVTNITDSQPAPYMKEIIHLWSDGRLIDFLRERNIPISVLSP 270
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 5.9
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 50 VESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSV 87
V+ ++ Y +KSQ +E+E++ +PL ++ N++
Sbjct: 512 VQEAEKLYNEQVDREKSQFKEVEKQNQPLAVFSESNTL 549
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 25.4 bits (53), Expect = 5.9
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 29 SGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIE-RKLEPLMSKNKRNSV 87
SG+V D REK + +E+E + + +T +N ++ L + E +L K K+
Sbjct: 208 SGVVIDGREKSSSELHEEESEQAAEGDTAKNSGTDAQAPLSDDEWLRLHRTRIKEKQPE- 266
Query: 88 ASPNLIGHESDPKRPWRTNSNKEKLLRIDNE 118
+++G D + + +N E L R+ N+
Sbjct: 267 EEVSVVG---DELKSFDKENNDEHLERVTND 294
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 5.9
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 13/195 (6%)
Query: 6 EKSKIAKLL--HDVAVK--ENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPY 61
E + +LL H A+ EN+L E + +I + + K S K++ +E N
Sbjct: 485 ESKNLLELLDKHQTALSSVENRLDE-----ISEIVDSYHKYSGV-RTKLQVFEENKTNKS 538
Query: 62 IVDKSQLEEIERKLEPLMSKN-KRNSVASPNLIGHESDPKRPWRTNSNKEKLLR-IDNEL 119
+ +QL ++ +MS K + + L D ++ + E LR + L
Sbjct: 539 AILANQLMTLKSSFSEVMSYELKDDDNYNEELDKLVEDVRKKLQEKEEAESSLRSVRERL 598
Query: 120 KRHLDKATDLIAPLSDGE-MSDIIKQSREESITTRPVEYVRLVDTVEEAKKTLFNFQYRA 178
+ + + I L++ + + +S + + E L +EE +KTL + Q+ +
Sbjct: 599 EIRISLSVQSINDLTENKKIKTKTLKSYSGTFASMISEIKALESEIEENRKTLHSLQFGS 658
Query: 179 VCNSTATAILREAHA 193
A I + HA
Sbjct: 659 TFYEKAIEICVDQHA 673
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 7.8
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 31 LVKDIREKFGKDSNED------EDKVESVDETYENPYIVDKSQ 67
L++ REKFGKD ++ K +D T E P+ V +++
Sbjct: 33 LIEWFREKFGKDISQPSVSQILSSKYSYLDNTVEKPWDVKRNR 75
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.0 bits (52), Expect = 7.8
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 42 DSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASP 90
D+N +ED ++ + + +++ + EE + EP+++ +K+NS + P
Sbjct: 61 DTNYEEDIIDDEESAQVDEEELEEEEEEEEDATPEPVVT-SKKNSRSKP 108
>SPCC16A11.07 |coq10||ubiquinone binding protein
Coq10|Schizosaccharomyces pombe|chr 3|||Manual
Length = 164
Score = 25.0 bits (52), Expect = 7.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 52 SVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKEK 111
S++E VD E KL +MSK +SVAS + G K + S EK
Sbjct: 105 SIEEASRGRVRVDLEVDFEFASKLHGMMSKFVGSSVASEIIQGFVQQAKIKHKLESENEK 164
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 25.0 bits (52), Expect = 7.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 84 RNSVASPNLIGHESDPKRPWRTNSNKEKLLRIDNELKRHLDKATDLIAPLS 134
+N + NL + S +P T K+K I+NE L K + L + L+
Sbjct: 472 KNHRVNSNLTANNSLNDKPGFTIEQKDKNFSINNERNNFLQKLSTLDSSLA 522
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 25.0 bits (52), Expect = 7.8
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 58 ENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESD 98
+NP+++ + L E+ ++ +S+N + A+ NL+ D
Sbjct: 3 DNPWVLQEQVLVELSEVIKNSLSENSQTRNAALNLLEKAKD 43
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.128 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 995,403
Number of Sequences: 5004
Number of extensions: 44798
Number of successful extensions: 172
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 157
Number of HSP's gapped (non-prelim): 36
length of query: 203
length of database: 2,362,478
effective HSP length: 70
effective length of query: 133
effective length of database: 2,012,198
effective search space: 267622334
effective search space used: 267622334
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 52 (25.0 bits)
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